mRNA_M-pyrifera_M_contig117829.3690.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig117829.3690.1
Unique NamemRNA_M-pyrifera_M_contig117829.3690.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig117829.3690.1 vs. uniprot
Match: A0A5A8DMH1_CAFRO (AP-2 complex subunit alpha n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DMH1_CAFRO)

HSP 1 Score: 230 bits (587), Expect = 2.710e-67
Identity = 112/177 (63.28%), Postives = 145/177 (81.92%), Query Frame = 1 
Query:    7 LTAILSNIQVTRSLNRNNAEHAILFEAMGLILKWGPRADPALRDQAAQHLARFVSIKEANIRYLGLVNMTKLAALPGTRETILKQQKFIFISFKEADISLRRAALDLLFVICGKDNAMEIVGELLRFLVLADVAIKEEMVLKIAILAERFAPDLRWYVDTILELIAHAGDYVTDDIW 537
            LT +L    VT+SLN NNA HAILFEA+ +I+++G     +LR++A +HL+++V+I+E N+RYLGL  +T++A+LPGTRE +L+QQK I IS KE DISLRR ALDLLF  CG+DNA EIVGEL+  L+ AD AI+ EMVLKIAILAERFAP+LRWYVD +L+L+AHAGD+V+DDIW
Sbjct:  280 LTDVLRGTPVTKSLNHNNASHAILFEAINIIIRYGTNGPASLRERAVEHLSKYVNIREPNVRYLGLEGLTRMASLPGTREQVLRQQKAILISLKERDISLRRRALDLLFATCGRDNAEEIVGELVTHLITADSAIRSEMVLKIAILAERFAPNLRWYVDVVLKLLAHAGDHVSDDIW 456
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BLAST of mRNA_M-pyrifera_M_contig117829.3690.1 vs. uniprot
Match: A0A1Z5K119_FISSO (AP-2 complex subunit alpha n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K119_FISSO)

HSP 1 Score: 203 bits (516), Expect = 2.570e-57
Identity = 103/177 (58.19%), Postives = 138/177 (77.97%), Query Frame = 1 
Query:    7 LTAILSNIQVTRSLNRNNAEHAILFEAMGLILKWGPRADPALRDQAAQHLARFVSIKEANIRYLGLVNMTKLAALPGTRETILKQQKFIFISFKEADISLRRAALDLLFVICGKDNAMEIVGELLRFLVLADVAIKEEMVLKIAILAERFAPDLRWYVDTILELIAHAGDYVTDDIW 537
            ++ IL+   V+ S+N++NA+HA+LFEA+ LI+ WG  +  ALRD A + L +F+S++E NIRYLGL+ M KLA L G+ E+I K Q  + +S K+ADIS+RR ALDLLFV+C  DNA  IV EL+  LV+AD AI+EEMVLKIAILAE++A DLRWYVDTIL+LI+ +GD+V+D IW
Sbjct:  364 ISKILTETDVSDSINKSNADHAVLFEAVNLIICWGSTSQQALRDGAMKLLGKFISVREPNIRYLGLMTMAKLAQLEGSGESIKKHQATVLVSLKDADISVRRRALDLLFVMCDTDNAERIVDELVAHLVIADAAIREEMVLKIAILAEKYATDLRWYVDTILKLISISGDHVSDAIW 540
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BLAST of mRNA_M-pyrifera_M_contig117829.3690.1 vs. uniprot
Match: A0A7S1Y9P9_9STRA (AP-2 complex subunit alpha n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y9P9_9STRA)

HSP 1 Score: 201 bits (511), Expect = 8.490e-57
Identity = 103/174 (59.20%), Postives = 134/174 (77.01%), Query Frame = 1 
Query:   16 ILSNIQVTRSLNRNNAEHAILFEAMGLILKWGPRADPALRDQAAQHLARFVSIKEANIRYLGLVNMTKLAALPGTRETILKQQKFIFISFKEADISLRRAALDLLFVICGKDNAMEIVGELLRFLVLADVAIKEEMVLKIAILAERFAPDLRWYVDTILELIAHAGDYVTDDIW 537
            IL+   V+ S+N++NA+HA+LFEA+ LI+ WG      LRD A + L +F+S++E NIRYLGL+ M KLA L G+ E+I K Q  + +S K+ADIS+RR ALDLLFV+C  DNA  IV EL+  LVLAD AI+EEMVLKIAILAE++A DLRWYVDTIL+LI+ +GD+V+D IW
Sbjct:  260 ILTETDVSDSINKSNADHAVLFEAVNLIVVWGSSGPVQLRDGAMKLLGKFISVREPNIRYLGLMTMAKLAQLDGSAESIKKHQATVLVSLKDADISVRRRALDLLFVMCDTDNAERIVDELVAHLVLADAAIREEMVLKIAILAEKYATDLRWYVDTILKLISISGDHVSDPIW 433
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BLAST of mRNA_M-pyrifera_M_contig117829.3690.1 vs. uniprot
Match: A0A7S1BCA8_9STRA (AP-2 complex subunit alpha n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BCA8_9STRA)

HSP 1 Score: 200 bits (508), Expect = 2.760e-56
Identity = 100/174 (57.47%), Postives = 136/174 (78.16%), Query Frame = 1 
Query:   16 ILSNIQVTRSLNRNNAEHAILFEAMGLILKWGPRADPALRDQAAQHLARFVSIKEANIRYLGLVNMTKLAALPGTRETILKQQKFIFISFKEADISLRRAALDLLFVICGKDNAMEIVGELLRFLVLADVAIKEEMVLKIAILAERFAPDLRWYVDTILELIAHAGDYVTDDIW 537
            IL+   V+ S+N++NA+HAILFEA+ LI+ WG     ALRD A + L +F+S++E NIRYLGL+ M +LA L G+ E++ K Q  + +S K+ADIS+RR ALDLLFV+C  DNA +IV EL+ +L +AD AI+EEMVLKIAILAE++A DL+WYVDTIL+LI+ +GD+V+D IW
Sbjct:  289 ILTETDVSDSINKSNADHAILFEAVNLIVIWGAAGPTALRDGAMRLLGKFISVREPNIRYLGLMTMARLAQLEGSAESVKKHQATVLVSLKDADISVRRRALDLLFVMCDTDNAEKIVNELVVYLTVADAAIREEMVLKIAILAEKYATDLKWYVDTILKLISISGDHVSDSIW 462
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BLAST of mRNA_M-pyrifera_M_contig117829.3690.1 vs. uniprot
Match: A0A7S2WLX7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WLX7_9STRA)

HSP 1 Score: 198 bits (503), Expect = 3.040e-56
Identity = 101/174 (58.05%), Postives = 133/174 (76.44%), Query Frame = 1 
Query:   16 ILSNIQVTRSLNRNNAEHAILFEAMGLILKWGPRADPALRDQAAQHLARFVSIKEANIRYLGLVNMTKLAALPGTRETILKQQKFIFISFKEADISLRRAALDLLFVICGKDNAMEIVGELLRFLVLADVAIKEEMVLKIAILAERFAPDLRWYVDTILELIAHAGDYVTDDIW 537
            IL+   V+ S+N++NA+HA+LFEA+ LI+ WG      LRD A + L +F+S++E NIRYLGL+ M KLA L G+ E + K Q  + +S K+ADIS+RR ALDLLFV+C  DN+  IV EL+  LVLAD AI+EEMVLKIAILAE++A DLRWYVDTIL+LI+ +GD+V+D IW
Sbjct:  338 ILTETDVSDSINKSNADHAVLFEAVNLIVCWGESGPVQLRDGAMKLLGKFISVREPNIRYLGLMTMAKLAQLEGSAEGVKKHQATVLVSLKDADISVRRRALDLLFVMCDTDNSERIVDELVAHLVLADAAIREEMVLKIAILAEKYATDLRWYVDTILKLISISGDHVSDPIW 511
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BLAST of mRNA_M-pyrifera_M_contig117829.3690.1 vs. uniprot
Match: A0A7S2XJT4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XJT4_9STRA)

HSP 1 Score: 195 bits (496), Expect = 8.030e-56
Identity = 102/174 (58.62%), Postives = 132/174 (75.86%), Query Frame = 1 
Query:   16 ILSNIQVTRSLNRNNAEHAILFEAMGLILKWGPRADPALRDQAAQHLARFVSIKEANIRYLGLVNMTKLAALPGTRETILKQQKFIFISFKEADISLRRAALDLLFVICGKDNAMEIVGELLRFLVLADVAIKEEMVLKIAILAERFAPDLRWYVDTILELIAHAGDYVTDDIW 537
            IL+   V+ S+N++NA+HAILFEA+ LI+ WG  A   LR+ A Q L +F+S++E NIRYLGL+ M KLA + G+ E + K Q  + +S K+ADIS+RR ALDLLFV+C  DNA  IV EL+  LVLAD AI+EEMVLKIAILAE++A DLRWYVDTI++LI  +GD V+D IW
Sbjct:  325 ILTETDVSDSINKSNADHAILFEAVNLIVIWGINAPIQLREGAMQLLGKFISVREPNIRYLGLMTMAKLAQIEGSGEGVKKHQATVLVSLKDADISVRRRALDLLFVMCDTDNAERIVDELVANLVLADAAIREEMVLKIAILAEKYATDLRWYVDTIIKLITISGDNVSDAIW 498
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BLAST of mRNA_M-pyrifera_M_contig117829.3690.1 vs. uniprot
Match: A0A1E7FR64_9STRA (AP-2 complex subunit alpha n=2 Tax=Bacillariaceae TaxID=33852 RepID=A0A1E7FR64_9STRA)

HSP 1 Score: 198 bits (503), Expect = 1.310e-55
Identity = 102/174 (58.62%), Postives = 132/174 (75.86%), Query Frame = 1 
Query:   16 ILSNIQVTRSLNRNNAEHAILFEAMGLILKWGPRADPALRDQAAQHLARFVSIKEANIRYLGLVNMTKLAALPGTRETILKQQKFIFISFKEADISLRRAALDLLFVICGKDNAMEIVGELLRFLVLADVAIKEEMVLKIAILAERFAPDLRWYVDTILELIAHAGDYVTDDIW 537
            IL+   V+ S+N++NA+HAILFEA+ LI+ WG      LR+ A + L +F+S++E NIRYLGL+ M KLA L GT E+I K Q  + +S K+ADIS+RR AL LLFV+C  DNA  IV EL+  L LAD AI+EEMVLKIAILAE++A DLRWYVDTIL+LI+ +GD+V+D IW
Sbjct:  312 ILTETDVSDSINKSNADHAILFEAVNLIVTWGSSGPSQLREGAMKLLGKFISVREPNIRYLGLLTMAKLAQLEGTAESIKKHQSTVLVSLKDADISVRRRALGLLFVMCDTDNAERIVDELVAHLALADAAIREEMVLKIAILAEKYATDLRWYVDTILKLISISGDHVSDAIW 485
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BLAST of mRNA_M-pyrifera_M_contig117829.3690.1 vs. uniprot
Match: K0R582_THAOC (AP-2 complex subunit alpha n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R582_THAOC)

HSP 1 Score: 198 bits (503), Expect = 1.530e-55
Identity = 102/174 (58.62%), Postives = 131/174 (75.29%), Query Frame = 1 
Query:   16 ILSNIQVTRSLNRNNAEHAILFEAMGLILKWGPRADPALRDQAAQHLARFVSIKEANIRYLGLVNMTKLAALPGTRETILKQQKFIFISFKEADISLRRAALDLLFVICGKDNAMEIVGELLRFLVLADVAIKEEMVLKIAILAERFAPDLRWYVDTILELIAHAGDYVTDDIW 537
            IL    V+ S+N++NA+HAILFEA+ LI+ WG      LR+ A Q L +F+S++E NIRYLGL+ M KLA + G+ E   K Q  + +S K+ADIS+RR ALDLLFVIC  DNA  +V EL+  LV+AD +I+EEMVLKIAILAE++A DLRWYVDTIL+LI+ AGDYV+D IW
Sbjct:  312 ILMETDVSDSINKSNADHAILFEAVQLIVAWGTTCPVTLREGAMQLLGKFISVREPNIRYLGLMTMAKLAQIEGSVEGAKKHQATVLVSLKDADISVRRRALDLLFVICDTDNAERVVDELVAHLVVADASIREEMVLKIAILAEKYATDLRWYVDTILKLISIAGDYVSDSIW 485
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BLAST of mRNA_M-pyrifera_M_contig117829.3690.1 vs. uniprot
Match: A0A7S2L0R2_9STRA (Hypothetical protein (Fragment) n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L0R2_9STRA)

HSP 1 Score: 196 bits (499), Expect = 1.720e-55
Identity = 100/177 (56.50%), Postives = 133/177 (75.14%), Query Frame = 1 
Query:    7 LTAILSNIQVTRSLNRNNAEHAILFEAMGLILKWGPRADPALRDQAAQHLARFVSIKEANIRYLGLVNMTKLAALPGTRETILKQQKFIFISFKEADISLRRAALDLLFVICGKDNAMEIVGELLRFLVLADVAIKEEMVLKIAILAERFAPDLRWYVDTILELIAHAGDYVTDDIW 537
            +T I+   +V+ S+N++NA+HAILFEA+ LI+ WG    P +R+ A   L +F+S++E NIRYLGL  M +LA + G+ E   K Q  + +S K+ADIS+RR ALDLLFVIC  DNA  IV EL+  LV+AD +I+EEMVLKIAILAE++A DLRWYVDTIL+LI+ +GDYV+D IW
Sbjct:  315 VTRIMFETEVSDSINKSNADHAILFEAVNLIVAWGTTCPPEMREGAMNILGKFISVREPNIRYLGLSTMAQLAQIDGSVEGAKKHQATVLVSLKDADISVRRRALDLLFVICDTDNAERIVDELVAHLVVADASIREEMVLKIAILAEKYATDLRWYVDTILKLISISGDYVSDPIW 491
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BLAST of mRNA_M-pyrifera_M_contig117829.3690.1 vs. uniprot
Match: A0A7S2ULM5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2ULM5_9STRA)

HSP 1 Score: 192 bits (487), Expect = 1.810e-55
Identity = 98/174 (56.32%), Postives = 131/174 (75.29%), Query Frame = 1 
Query:   16 ILSNIQVTRSLNRNNAEHAILFEAMGLILKWGPRADPALRDQAAQHLARFVSIKEANIRYLGLVNMTKLAALPGTRETILKQQKFIFISFKEADISLRRAALDLLFVICGKDNAMEIVGELLRFLVLADVAIKEEMVLKIAILAERFAPDLRWYVDTILELIAHAGDYVTDDIW 537
            IL+   V+ S+N++NA+HA+LFEA+ LI+ WG      LR+ A + L +F+S++E NIRYLGL+ M +LA +  + E I K Q  + +S K+ADIS+RR ALDLLFV+C  DNA  IV EL+  LV+AD AI+EEMVLKIAILAE++A DLRWYVDTIL+LI+ +GD+V D IW
Sbjct:  315 ILTETDVSDSINKSNADHAVLFEALNLIVVWGGSGPQQLREAAMKLLGKFISVREPNIRYLGLMTMARLAQIETSGEGIKKHQATVLVSLKDADISVRRRALDLLFVMCDTDNAERIVDELVAHLVVADAAIREEMVLKIAILAEKYATDLRWYVDTILKLISISGDHVNDAIW 488
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117829.3690.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8DMH1_CAFRO2.710e-6763.28AP-2 complex subunit alpha n=3 Tax=Cafeteria roenb... [more]
A0A1Z5K119_FISSO2.570e-5758.19AP-2 complex subunit alpha n=2 Tax=Fistulifera sol... [more]
A0A7S1Y9P9_9STRA8.490e-5759.20AP-2 complex subunit alpha n=1 Tax=Grammatophora o... [more]
A0A7S1BCA8_9STRA2.760e-5657.47AP-2 complex subunit alpha n=1 Tax=Corethron hystr... [more]
A0A7S2WLX7_9STRA3.040e-5658.05Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A7S2XJT4_9STRA8.030e-5658.62Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A1E7FR64_9STRA1.310e-5558.62AP-2 complex subunit alpha n=2 Tax=Bacillariaceae ... [more]
K0R582_THAOC1.530e-5558.62AP-2 complex subunit alpha n=1 Tax=Thalassiosira o... [more]
A0A7S2L0R2_9STRA1.720e-5556.50Hypothetical protein (Fragment) n=2 Tax=Skeletonem... [more]
A0A7S2ULM5_9STRA1.810e-5556.32Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig117829contigM-pyrifera_M_contig117829:15..551 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score196.8
Seed ortholog evalue8.5e-48
Seed eggNOG ortholog159749.K0R582
Preferred nameAP2A2
KEGG koko:K11824
KEGG Pathwayko04144,ko04721,ko04961,ko05016,map04144,map04721,map04961,map05016
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000278,GO:0000281,GO:0000323,GO:0000331,GO:0000910,GO:0001775,GO:0002064,GO:0002065,GO:0002066,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0002478,GO:0002495,GO:0002504,GO:0002682,GO:0003006,GO:0003674,GO:0005102,GO:0005215,GO:0005488,GO:0005515,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005768,GO:0005773,GO:0005774,GO:0005794,GO:0005798,GO:0005829,GO:0005886,GO:0005905,GO:0005938,GO:0006109,GO:0006807,GO:0006810,GO:0006884,GO:0006886,GO:0006887,GO:0006892,GO:0006895,GO:0006897,GO:0006898,GO:0006950,GO:0006955,GO:0006970,GO:0006971,GO:0007049,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007267,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007399,GO:0008021,GO:0008022,GO:0008104,GO:0008150,GO:0008152,GO:0008289,GO:0008356,GO:0008361,GO:0008565,GO:0009056,GO:0009057,GO:0009628,GO:0009790,GO:0009792,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0009992,GO:0010008,GO:0010324,GO:0010556,GO:0010558,GO:0010605,GO:0010720,GO:0010975,GO:0010976,GO:0012505,GO:0012506,GO:0012510,GO:0015031,GO:0015833,GO:0016020,GO:0016032,GO:0016043,GO:0016055,GO:0016192,GO:0016323,GO:0016324,GO:0016482,GO:0019222,GO:0019538,GO:0019725,GO:0019882,GO:0019884,GO:0019886,GO:0019899,GO:0019900,GO:0019901,GO:0019904,GO:0019953,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0022607,GO:0023052,GO:0030100,GO:0030104,GO:0030117,GO:0030118,GO:0030119,GO:0030120,GO:0030122,GO:0030125,GO:0030128,GO:0030130,GO:0030131,GO:0030132,GO:0030133,GO:0030135,GO:0030136,GO:0030139,GO:0030140,GO:0030141,GO:0030154,GO:0030163,GO:0030175,GO:0030276,GO:0030658,GO:0030659,GO:0030660,GO:0030662,GO:0030665,GO:0030666,GO:0030667,GO:0030669,GO:0030674,GO:0030707,GO:0030855,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031344,GO:0031346,GO:0031410,GO:0031982,GO:0032153,GO:0032433,GO:0032501,GO:0032502,GO:0032504,GO:0032506,GO:0032535,GO:0032794,GO:0032799,GO:0032801,GO:0032802,GO:0032879,GO:0032881,GO:0032885,GO:0032940,GO:0032991,GO:0033036,GO:0034381,GO:0034383,GO:0034613,GO:0034622,GO:0035091,GO:0035567,GO:0035615,GO:0036019,GO:0036020,GO:0036062,GO:0036090,GO:0036230,GO:0036465,GO:0038024,GO:0042119,GO:0042592,GO:0042734,GO:0042886,GO:0042995,GO:0043112,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043255,GO:0043299,GO:0043312,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044448,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0044703,GO:0044877,GO:0045055,GO:0045177,GO:0045184,GO:0045202,GO:0045321,GO:0045334,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045807,GO:0045912,GO:0046903,GO:0046907,GO:0048002,GO:0048013,GO:0048193,GO:0048259,GO:0048260,GO:0048268,GO:0048468,GO:0048475,GO:0048477,GO:0048488,GO:0048489,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048609,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0048878,GO:0050690,GO:0050750,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051049,GO:0051050,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051285,GO:0051286,GO:0051301,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051704,GO:0051716,GO:0051960,GO:0051962,GO:0055082,GO:0060071,GO:0060090,GO:0060255,GO:0060284,GO:0060429,GO:0060627,GO:0061024,GO:0061640,GO:0062012,GO:0062014,GO:0065003,GO:0065007,GO:0065008,GO:0070325,GO:0070382,GO:0070727,GO:0070820,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072583,GO:0080090,GO:0090066,GO:0090175,GO:0097006,GO:0097060,GO:0097458,GO:0097479,GO:0097480,GO:0097708,GO:0097718,GO:0098588,GO:0098590,GO:0098657,GO:0098748,GO:0098793,GO:0098796,GO:0098797,GO:0098805,GO:0098852,GO:0098858,GO:0099003,GO:0099024,GO:0099503,GO:0099504,GO:0099568,GO:0099738,GO:0101002,GO:0101003,GO:0120025,GO:0120035,GO:0120038,GO:0198738,GO:1900125,GO:1900126,GO:1901532,GO:1901564,GO:1901565,GO:1901575,GO:1902036,GO:1902410,GO:1903047,GO:1903706,GO:1905114,GO:1905330,GO:1990386,GO:2000026,GO:2000027,GO:2000736
EggNOG free text desc.Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration
EggNOG OGs2XBK2@2836,COG4354@1,KOG1077@2759
COG Functional cat.U
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131,ko04147
Exons1
Model size537
Cds size537
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815696.3904228-CDS-M-pyrifera_M_contig117829:14..5511622815696.3904228-CDS-M-pyrifera_M_contig117829:14..551Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig117829 15..551 +
1692277526.288585-CDS-M-pyrifera_M_contig117829:14..5511692277526.288585-CDS-M-pyrifera_M_contig117829:14..551Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig117829 15..551 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig117829.3690.1prot_M-pyrifera_M_contig117829.3690.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig117829 15..551 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig117829.3690.1

>prot_M-pyrifera_M_contig117829.3690.1 ID=prot_M-pyrifera_M_contig117829.3690.1|Name=mRNA_M-pyrifera_M_contig117829.3690.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=179bp
TALTAILSNIQVTRSLNRNNAEHAILFEAMGLILKWGPRADPALRDQAAQ
HLARFVSIKEANIRYLGLVNMTKLAALPGTRETILKQQKFIFISFKEADI
SLRRAALDLLFVICGKDNAMEIVGELLRFLVLADVAIKEEMVLKIAILAE
RFAPDLRWYVDTILELIAHAGDYVTDDIW
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mRNA from alignment at M-pyrifera_M_contig117829:15..551+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig117829.3690.1 ID=mRNA_M-pyrifera_M_contig117829.3690.1|Name=mRNA_M-pyrifera_M_contig117829.3690.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=537bp|location=Sequence derived from alignment at M-pyrifera_M_contig117829:15..551+ (Macrocystis pyrifera P11B4 male)
ACTGCATTGACTGCAATCCTCTCCAACATTCAAGTCACGCGATCTCTCAA
CCGCAACAATGCGGAACATGCCATTCTCTTTGAAGCAATGGGATTGATTC
TCAAGTGGGGTCCACGTGCCGACCCTGCACTGCGTGATCAAGCTGCACAA
CATCTTGCACGTTTCGTGTCCATCAAGGAAGCCAACATTCGCTACCTTGG
GCTCGTGAACATGACGAAACTTGCTGCATTGCCTGGAACAAGAGAAACTA
TCCTCAAGCAACAAAAGTTTATCTTCATTTCCTTCAAGGAAGCAGATATT
TCCCTTCGACGTGCAGCTCTTGACTTGCTCTTTGTGATTTGTGGCAAAGA
CAATGCGATGGAAATCGTTGGTGAACTTCTTCGTTTCTTGGTCCTCGCTG
ATGTGGCAATCAAGGAAGAAATGGTGTTGAAGATTGCTATTCTTGCAGAA
CGATTTGCACCAGATCTTCGCTGGTATGTGGATACAATTTTGGAATTGAT
TGCACATGCTGGAGATTATGTCACCGATGACATTTGG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig117829:15..551+

>mRNA_M-pyrifera_M_contig117829.3690.1 ID=mRNA_M-pyrifera_M_contig117829.3690.1|Name=mRNA_M-pyrifera_M_contig117829.3690.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1074bp|location=Sequence derived from alignment at M-pyrifera_M_contig117829:15..551+ (Macrocystis pyrifera P11B4 male)
ACTGCATTGACTGCAATCCTCTCCAACATTCAAGTCACGCGATCTCTCAA
CCGCAACAATGCGGAACATGCCATTCTCTTTGAAGCAATGGGATTGATTC
TCAAGTGGGGTCCACGTGCCGACCCTGCACTGCGTGATCAAGCTGCACAA
CATCTTGCACGTTTCGTGTCCATCAAGGAAGCCAACATTCGCTACCTTGG
GCTCGTGAACATGACGAAACTTGCTGCATTGCCTGGAACAAGAGAAACTA
TCCTCAAGCAACAAAAGTTTATCTTCATTTCCTTCAAGGAAGCAGATATT
TCCCTTCGACGTGCAGCTCTTGACTTGCTCTTTGTGATTTGTGGCAAAGA
CAATGCGATGGAAATCGTTGGTGAACTTCTTCGTTTCTTGGTCCTCGCTG
ATGTGGCAATCAAGGAAGAAATGGTGTTGAAGATTGCTATTCTTGCAGAA
CGATTTGCACCAGATCTTCGCTGGTATGTGGATACAATTTTGGAATTGAT
TGCACATGCTGGAGATTATGTCACCGATGACATTTGGACTGCATTGACTG
CAATCCTCTCCAACATTCAAGTCACGCGATCTCTCAACCGCAACAATGCG
GAACATGCCATTCTCTTTGAAGCAATGGGATTGATTCTCAAGTGGGGTCC
ACGTGCCGACCCTGCACTGCGTGATCAAGCTGCACAACATCTTGCACGTT
TCGTGTCCATCAAGGAAGCCAACATTCGCTACCTTGGGCTCGTGAACATG
ACGAAACTTGCTGCATTGCCTGGAACAAGAGAAACTATCCTCAAGCAACA
AAAGTTTATCTTCATTTCCTTCAAGGAAGCAGATATTTCCCTTCGACGTG
CAGCTCTTGACTTGCTCTTTGTGATTTGTGGCAAAGACAATGCGATGGAA
ATCGTTGGTGAACTTCTTCGTTTCTTGGTCCTCGCTGATGTGGCAATCAA
GGAAGAAATGGTGTTGAAGATTGCTATTCTTGCAGAACGATTTGCACCAG
ATCTTCGCTGGTATGTGGATACAATTTTGGAATTGATTGCACATGCTGGA
GATTATGTCACCGATGACATTTGG
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