mRNA_M-pyrifera_M_contig117809.3682.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig117809.3682.1 vs. uniprot
Match: A0A7Y5FB54_9BACT (Flagellar biosynthesis anti-sigma factor FlgM n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Y5FB54_9BACT) HSP 1 Score: 77.0 bits (188), Expect = 2.430e-16 Identity = 45/99 (45.45%), Postives = 67/99 (67.68%), Query Frame = 1
Query: 1 MVNIHGLGGVPEPTSDRPSGSREKRRDNNVNADNRR-DGVDISSQGRQAADISRIKAIADQEPDIRPERVEQAKQAIENGAHKNESVIVEIAKRLEDLL 294
MV +HG+GGVPEP +RP R+KRRD V + + D V ISS+ + AA ++ + A+A Q D+R +RV+QAKQA+E G +K+ V+ E+A+R+ L
Sbjct: 1 MVGVHGVGGVPEPAPERPVNVRDKRRDEAVASSSAETDDVLISSEAQAAAKLTALVALAKQS-DVRQDRVDQAKQALEQGTYKHPDVVSELAQRISKFL 98
BLAST of mRNA_M-pyrifera_M_contig117809.3682.1 vs. uniprot
Match: A0A7V7EEC0_9BACT (FlgM domain-containing protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7V7EEC0_9BACT) HSP 1 Score: 65.1 bits (157), Expect = 1.190e-11 Identity = 38/98 (38.78%), Postives = 61/98 (62.24%), Query Frame = 1
Query: 1 MVNIHGLGGVPEPTSDRPSGSREKRRDNNVNADNRRDGVDISSQGRQAADISRIKAIADQEPDIRPERVEQAKQAIENGAHKNESVIVEIAKRLEDLL 294
MV I G+GG+ EPT +RP+ R+ R+ ++ + +D + ISS+ + AA ++R IA P +RPE+V QAK+ +E +K V+ E+AKR+ L
Sbjct: 1 MVGIKGIGGIQEPTPERPANVRD-RKTSDTKSPEAKDDLLISSEAQAAATLARTIQIAKSAPQVRPEKVAQAKERLEREDYKRPEVVREVAKRVAKYL 97
BLAST of mRNA_M-pyrifera_M_contig117809.3682.1 vs. uniprot
Match: A0A831XQE7_9BACT (FlgM domain-containing protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A831XQE7_9BACT) HSP 1 Score: 62.4 bits (150), Expect = 1.380e-10 Identity = 36/98 (36.73%), Postives = 58/98 (59.18%), Query Frame = 1
Query: 1 MVNIHGLGGVPEPTSDRPSGSREKRRDNNVNADNRRDGVDISSQGRQAADISRIKAIADQEPDIRPERVEQAKQAIENGAHKNESVIVEIAKRLEDLL 294
MV I GLG +PEP DRP+ RE + D +D V ISS+ + AA ++RI + P +R +RV+ A++ +E G ++ VI ++A+R++ L
Sbjct: 1 MVGIEGLGEIPEPKPDRPAKVREVKAGKAPRVDKPKDDVLISSEAQAAASVARIISETKSIPTVRTDRVDAARERLEQGDYQRPEVIAKVAERIDKYL 98
BLAST of mRNA_M-pyrifera_M_contig117809.3682.1 vs. uniprot
Match: A0A7V5STC5_9BACT (Flagellar biosynthesis anti-sigma factor FlgM n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7V5STC5_9BACT) HSP 1 Score: 60.8 bits (146), Expect = 5.040e-10 Identity = 36/97 (37.11%), Postives = 59/97 (60.82%), Query Frame = 1
Query: 4 VNIHGLGGVPEPTSDRPSGSREKRRDNNVNADNRRDGVDISSQGRQAADISRIKAIADQEPDIRPERVEQAKQAIENGAHKNESVIVEIAKRLEDLL 294
+ I GL G+ + + K+ DN N+D ++IS + +Q AD+S+IK I +Q PDIR +++ + KQ IE+GA+ +E VI +A+RL +L
Sbjct: 1 MEIRGLNGINKIDNSNNLNRVSKKLDNKANSDV----IEISEEAKQLADLSKIKEIVNQTPDIRLDKINEVKQKIESGAYNSEEVINTVAERLMKIL 93
BLAST of mRNA_M-pyrifera_M_contig117809.3682.1 vs. uniprot
Match: A0A7C7J2Z5_9BACT (FlgM domain-containing protein n=2 Tax=Bacteria TaxID=2 RepID=A0A7C7J2Z5_9BACT) HSP 1 Score: 59.7 bits (143), Expect = 3.020e-9 Identity = 42/103 (40.78%), Postives = 60/103 (58.25%), Query Frame = 1
Query: 1 MVNIHGLGGVPEPTS-DRPSGSREKRR----DNNVNADNRRDGVDISSQGRQAADISRIKAIADQEPDIRPERVEQAKQAIENGAHKNESVIVEIAKRLEDLL 294
MV I G+ GVP+P+ +RPSG+R + D NA N D V IS+Q + AA + + A+ +PDIR +RV AK AIE +KN V+ +A+R+ L
Sbjct: 27 MVGIQGIAGVPDPSKPERPSGTRSNSKSEAADAGSNAANS-DDVVISNQAQAAAQVIDALSSAENQPDIRADRVAAAKAAIERADYKNPDVVEVVAQRISKFL 128
BLAST of mRNA_M-pyrifera_M_contig117809.3682.1 vs. uniprot
Match: A0A2A5DKX3_9BACT (FlgM domain-containing protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A2A5DKX3_9BACT) HSP 1 Score: 52.8 bits (125), Expect = 7.750e-7 Identity = 33/98 (33.67%), Postives = 51/98 (52.04%), Query Frame = 1
Query: 1 MVNIHGLGGVPEPTSDRPSGSREKRRDNNVNADNRRDGVDISSQGRQAADISRIKAIADQEPDIRPERVEQAKQAIENGAHKNESVIVEIAKRLEDLL 294
M I G+GG+PEP SDRPSG+R+ R + A +++ + DIR +RVE AK A+++G ++N V+ +A+RL L
Sbjct: 1 MGGIQGIGGIPEPRSDRPSGARDTDRTASXXXXXXXXXXXXXXXXXXXAVVAQALQATSTQSDIRLDRVEAAKAALDSGDYQNPDVVATVAERLSKFL 98
BLAST of mRNA_M-pyrifera_M_contig117809.3682.1 vs. uniprot
Match: A0A7V3RLN3_9SPIR (Flagellar biosynthesis anti-sigma factor FlgM n=1 Tax=Spirochaetes bacterium TaxID=2202144 RepID=A0A7V3RLN3_9SPIR) HSP 1 Score: 49.3 bits (116), Expect = 1.650e-5 Identity = 23/62 (37.10%), Postives = 45/62 (72.58%), Query Frame = 1
Query: 109 DGVDISSQGRQAADISRIKAIADQEPDIRPERVEQAKQAIENGAHKNESVIVEIAKRLEDLL 294
D DIS + RQ A+ ++I+ + ++ PD+R ++V++A++ ++NGA++ E VI +A+RL +L
Sbjct: 33 DSADISLEARQLAEEAKIREMLEKTPDVREDKVQEAREKLQNGAYEKEEVINTVAERLMKVL 94 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117809.3682.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig117809.3682.1 >prot_M-pyrifera_M_contig117809.3682.1 ID=prot_M-pyrifera_M_contig117809.3682.1|Name=mRNA_M-pyrifera_M_contig117809.3682.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=100bp MVNIHGLGGVPEPTSDRPSGSREKRRDNNVNADNRRDGVDISSQGRQAADback to top mRNA from alignment at M-pyrifera_M_contig117809:41..340- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig117809.3682.1 ID=mRNA_M-pyrifera_M_contig117809.3682.1|Name=mRNA_M-pyrifera_M_contig117809.3682.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=300bp|location=Sequence derived from alignment at M-pyrifera_M_contig117809:41..340- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig117809:41..340- >mRNA_M-pyrifera_M_contig117809.3682.1 ID=mRNA_M-pyrifera_M_contig117809.3682.1|Name=mRNA_M-pyrifera_M_contig117809.3682.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=600bp|location=Sequence derived from alignment at M-pyrifera_M_contig117809:41..340- (Macrocystis pyrifera P11B4 male)back to top |