mRNA_M-pyrifera_M_contig1178.3675.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig1178.3675.1
Unique NamemRNA_M-pyrifera_M_contig1178.3675.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig1178.3675.1 vs. uniprot
Match: D7FVQ4_ECTSI (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ4_ECTSI)

HSP 1 Score: 422 bits (1085), Expect = 8.870e-135
Identity = 213/237 (89.87%), Postives = 224/237 (94.51%), Query Frame = 1
Query:    1 RGVNFRALAELFALSSQDEGKEFQFRVSMLEVYNESIKDLLVEPGRPITSANKHDIRLDKRGKVYVEGLVECVVETLEEVEELAILGGRNRTVGNNNVNEHSSRSHLVLQVQIASTDLTTGYVQHGRLNLIDLAGSERIKSTAAEGQQLKEAQNINRSLSALGDVINALGSGNKHVPYRNSKLTFLLQDSLSSNAKVLMFVNINPAPQSQGESSCSLNFAKRCRSVQLGISRRLGAR 711
            RGVNFRAL ELF+LS+QD  KEFQFRVSMLEVYNESIKDL VEPGRP  +ANKHD+RLDK+G+VYVEGLVEC VETLEEVEEL +LGGRNRTVGNNNVNEHSSRSHLVLQV I STD+ TGYVQHG+LNLIDLAGSERIKSTAAEGQQLKEAQNINRSLSALGDVIN+LGSG+KHVPYRNSKLTFLLQDSLSSNAKVLMFVNINPAPQSQGESSCSLNFAKRCRSVQLG SRRLG R
Sbjct:  912 RGVNFRALGELFSLSNQDHTKEFQFRVSMLEVYNESIKDLFVEPGRPAAAANKHDVRLDKKGRVYVEGLVECEVETLEEVEELVVLGGRNRTVGNNNVNEHSSRSHLVLQVHITSTDVATGYVQHGKLNLIDLAGSERIKSTAAEGQQLKEAQNINRSLSALGDVINSLGSGSKHVPYRNSKLTFLLQDSLSSNAKVLMFVNINPAPQSQGESSCSLNFAKRCRSVQLGTSRRLGGR 1148          
BLAST of mRNA_M-pyrifera_M_contig1178.3675.1 vs. uniprot
Match: A0A835Z6H9_9STRA (Kinesin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6H9_9STRA)

HSP 1 Score: 332 bits (850), Expect = 4.360e-103
Identity = 170/235 (72.34%), Postives = 195/235 (82.98%), Query Frame = 1
Query:    1 RGVNFRALAELFALSSQDEGKEFQFRVSMLEVYNESIKDLLVEPGRPITSANKHDIRLDKRGKVYVEGLVECVVETLEEVEELAILGGRNRTVGNNNVNEHSSRSHLVLQVQIASTDLTTGYVQHGRLNLIDLAGSERIKSTAAEGQQLKEAQNINRSLSALGDVINALGSGNKHVPYRNSKLTFLLQDSLSSNAKVLMFVNINPAPQSQGESSCSLNFAKRCRSVQLGISRRLG 705
            RGVNFRALAELF  +  D  + + F VSMLEVYNE I+DLL        + N+H+IRLD+RG+VYVEGLVEC V  L+EVE L  LGGRNRTVGNNNVN HSSRSHLVLQV +A+T   +G VQ GRL+LIDLAGSER+KSTAAEGQ+LKEAQNINRSLSALGDVI ALG+G++HVPYRNSKLTFLLQDSL + AKVLMFVN++P P SQGES CSLNFAKRCR+VQLG ++RL 
Sbjct:  581 RGVNFRALAELFGRARDDATRSYAFTVSMLEVYNEEIRDLLAPASAAAAAENRHEIRLDRRGQVYVEGLVECAVTALDEVERLVELGGRNRTVGNNNVNLHSSRSHLVLQVAVAATYSASGAVQAGRLSLIDLAGSERLKSTAAEGQRLKEAQNINRSLSALGDVIAALGAGSRHVPYRNSKLTFLLQDSLGAGAKVLMFVNVSPHPASQGESVCSLNFAKRCRAVQLGQAKRLS 815          
BLAST of mRNA_M-pyrifera_M_contig1178.3675.1 vs. uniprot
Match: A0A7S1TQ83_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQ83_9STRA)

HSP 1 Score: 273 bits (697), Expect = 1.410e-78
Identity = 156/247 (63.16%), Postives = 184/247 (74.49%), Query Frame = 1
Query:    1 RGVNFRALAELFALSSQ-DEGKEFQFRVSMLEVYNESIKDLLVEPGRPIT-----------SANKHDIRLDKRGKVYVEGLVECVVETLEEVEELAILGGRNRTVGNNNVNEHSSRSHLVLQVQIASTDLTTGYVQHGRLNLIDLAGSERIKSTAAEGQQLKEAQNINRSLSALGDVINALGSGNKHVPYRNSKLTFLLQDSLSSNAKVLMFVNINPAPQSQGESSCSLNFAKRCRSVQLGISRRLG 705
            RGVNFRAL  LF L+    E  E  F+VSMLEVYNE I+DLL  PG P +           S+     R  K+G V+VEGL+EC V  ++EVEE+  LGG +R+  +NNVNEHSSRSHLVLQV++    L  G  QHG L+LIDLAGSER+K+T+A+GQ+LKEAQNIN+SLSALGDVI ALGS   HVPYRNSKLTFLLQDSL  ++KVLMFVNINPA  S GES+CSLNFA RCRSVQLG +RR+G
Sbjct: 1051 RGVNFRALKHLFDLAPVVGEEDEISFKVSMLEVYNEKIRDLLAPPGTPGSDDLSVRVLGGGSSGGSKRRGAKKG-VFVEGLLECEVNNVDEVEEIMSLGGEHRSTASNNVNEHSSRSHLVLQVKV----LRRGS-QHGLLSLIDLAGSERLKNTSAQGQRLKEAQNINKSLSALGDVIAALGSSQGHVPYRNSKLTFLLQDSLGPSSKVLMFVNINPAFNSAGESTCSLNFASRCRSVQLGPARRVG 1291          
BLAST of mRNA_M-pyrifera_M_contig1178.3675.1 vs. uniprot
Match: A0A7S2PFW9_9STRA (Kinesin-like protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PFW9_9STRA)

HSP 1 Score: 264 bits (674), Expect = 9.290e-77
Identity = 142/233 (60.94%), Postives = 170/233 (72.96%), Query Frame = 1
Query:    1 RGVNFRALAELFALSSQDEGKEFQFRVSMLEVYNESIKDLLVEPGRPITSANKHDIRLDKRGKVYVEGLVECVVETLEEVEELAILGGRNRTVGNNNVNEHSSRSHLVLQVQIASTDLTTGYVQHGRLNLIDLAGSERIKSTAAEGQQLKEAQNINRSLSALGDVINALGSGNKHVPYRNSKLTFLLQDSLSSNAKVLMFVNINPAPQSQGESSCSLNFAKRCRSVQLGISRR 699
            RGVN RAL  LF +    +  ++ F VS+LEVYNES++DLL           K D+R+   G VYVEGL +  VE+  +VE+L  L   NR   NNN+N+ SSRSHLVL   I  T   TG   HG+LNLIDLAGSER+K+T AEG +LKEAQNINRSLSALGDV+ ALG+ +KHVPYRNSKLTFLLQ+SL +NAKVLMFVNINP+  + GES CSLNFAKRCRSVQLG +R+
Sbjct:  664 RGVNVRALESLFEIGKSSQDIDYTFSVSILEVYNESVRDLLSRENH-----TKLDVRMGSNG-VYVEGLTKHDVESGSDVEQLIALASSNRVTANNNINDLSSRSHLVLTCYITGTKTITGATIHGKLNLIDLAGSERLKNTEAEGLRLKEAQNINRSLSALGDVVAALGNNSKHVPYRNSKLTFLLQESLRTNAKVLMFVNINPSTDNAGESICSLNFAKRCRSVQLGKARK 890          
BLAST of mRNA_M-pyrifera_M_contig1178.3675.1 vs. uniprot
Match: A0A7S2WM98_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WM98_9STRA)

HSP 1 Score: 233 bits (595), Expect = 1.420e-72
Identity = 122/170 (71.76%), Postives = 143/170 (84.12%), Query Frame = 1
Query:  190 VYVEGLVECVVETLEEVEELAILGGRNRTVGNNNVNEHSSRSHLVLQVQIASTDLTTGYVQHGRLNLIDLAGSERIKSTAAEGQQLKEAQNINRSLSALGDVINALGSGNKHVPYRNSKLTFLLQDSLSSNAKVLMFVNINPAPQSQGESSCSLNFAKRCRSVQLGISRR 699
            VYVEGL EC V++L  VE+L   GGRNR+VG+NNVN HSSRSHLVL V+I  T   +G   HG+LNLIDLAGSER+KST AEGQ+LKEAQNIN+SLSALGDVINALG  + HVPYRNSKL+FLLQDSLS++A+VLMFVNI PA +S GES CSLNFA RCR+VQLG +++
Sbjct:   10 VYVEGLTECQVDSLAAVEKLMSEGGRNRSVGSNNVNLHSSRSHLVLCVKIQGTS-HSGSTVHGKLNLIDLAGSERLKSTNAEGQRLKEAQNINKSLSALGDVINALGKNSTHVPYRNSKLSFLLQDSLSAHARVLMFVNITPALESAGESQCSLNFAGRCRAVQLGTAKK 178          
BLAST of mRNA_M-pyrifera_M_contig1178.3675.1 vs. uniprot
Match: A0A2P4XLZ0_9STRA (Kinesin-like protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XLZ0_9STRA)

HSP 1 Score: 239 bits (609), Expect = 2.410e-71
Identity = 138/244 (56.56%), Postives = 176/244 (72.13%), Query Frame = 1
Query:    1 RGVNFRALAELFAL-SSQDEGKEFQ--FRVSMLEVYNESIKDLLVEPGRPITSANKH-----DIRLDKRGKVYVEGLVECVVETLEEVEELAILGGRNRTVGNNNVNEHSSRSHLVLQVQIASTDLTTGYVQHGRLNLIDLAGSERIKSTAAEGQQLKEAQNINRSLSALGDVINALGSGNKHVPYRNSKLTFLLQDSLSSNAKVLMFVNINPAPQSQGESSCSLNFAKRCRSVQLGISRRLGA 708
            RGVNFRAL ELF++   +  G  F+   ++S+LEVYNE+I DLL   GR I+ A+       D+R+ K G VYVE L+E  V    +V +L  LG  +R+VG+++ NEHSSRSHLVL ++I +   + G  +  +L+LIDLAGSER+  TAA GQ+LKEAQNINRSLSALGDVI ALG+ +KHVPYRNSKLTFLLQDSLS N+KVLMFVN++P   +  E+ CSLNFA RCRSV LG ++   A
Sbjct:  159 RGVNFRALRELFSIRDDRMAGGNFECSMKLSILEVYNETIVDLLEGGGRTISGASPAVAKGLDVRVGKNG-VYVENLIEVEVFNEGDVLDLMRLGHSHRSVGSHDFNEHSSRSHLVLSIKIETGIKSDGRRRTSKLHLIDLAGSERVSKTAASGQRLKEAQNINRSLSALGDVIAALGANSKHVPYRNSKLTFLLQDSLSGNSKVLMFVNVSPVQWNAWETLCSLNFASRCRSVALGQAKAATA 401          
BLAST of mRNA_M-pyrifera_M_contig1178.3675.1 vs. uniprot
Match: A0A7S2GFV3_9STRA (Kinesin-like protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GFV3_9STRA)

HSP 1 Score: 237 bits (604), Expect = 3.300e-70
Identity = 130/233 (55.79%), Postives = 163/233 (69.96%), Query Frame = 1
Query:    1 RGVNFRALAELFALSSQDEGKEFQFRVSMLEVYNESIKDLLVEPGRPITSANKHDIRLDKRGKVYVEGLVECVVETLEEVEELAILGGRNRTVGNNNVNEHSSRSHLVLQVQIASTDLTTGYVQHGRLNLIDLAGSERIKSTAAEGQQLKEAQNINRSLSALGDVINALGSGNKHVPYRNSKLTFLLQDSLSSNAKVLMFVNINPAPQSQGESSCSLNFAKRCRSVQLGISRR 699
            RGVN R +  LF  +  +      F +SMLEVYNE I DLL E           ++R  ++ ++YVEGLVE  V ++ EVEE+   G   R VGNN+VNEHSSRSHLVL V+I   D T+     G+LNLIDLAGSER+K+T  EG + +E ++INRSLSALGDV+ ALG G  HVPYRNSKLTFLLQDSL +NA+VLMFVN+ P+  S  ES+CSL FA+RCRSV+LG ++R
Sbjct:  234 RGVNMRTVQHLFDYADTNADSTCSFTISMLEVYNERIVDLLAEKE---DFPPDLEVRQGEKKQIYVEGLVELDVSSVAEVEEMTSRGMAQRHVGNNSVNEHSSRSHLVLTVKIKVKDKTSNKSHQGKLNLIDLAGSERLKNT--EGARAEETKHINRSLSALGDVVAALGRGGNHVPYRNSKLTFLLQDSLKANARVLMFVNVTPSAASANESACSLKFAERCRSVKLGSAKR 461          
BLAST of mRNA_M-pyrifera_M_contig1178.3675.1 vs. uniprot
Match: A0A7S2W0I4_9STRA (Kinesin-like protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0I4_9STRA)

HSP 1 Score: 243 bits (620), Expect = 5.180e-70
Identity = 144/261 (55.17%), Postives = 175/261 (67.05%), Query Frame = 1
Query:    1 RGVNFRALAELFAL-SSQDEGKEFQFRVSMLEVYNESIKDLLVEPGR--PITSANKHDIRLDKRGKVYVEGLVECVVETLEEVEELAILGGRNRTVGNNNVNEHSSRSHLVLQVQIASTDLTTGYVQHGRLNLIDLAGSERIKSTAAEGQQLKEAQNINRSLSALGDVINALGSGNK--HVPYRNSKLTFLLQDSLSSNAKVLMFVNINPAPQSQGESSCSLNFAKRCRSVQLGISRRLGAR*SLA*YTWLDRIIYVYLAD 768
            RGVNFR+L ELF+L  ++ E  EF F +S LE+YNE I+DLLV+P R       +K DIR    G V V GL E  V + +EV  L   G   RTVG++++NEHSSRSH +L +      LT G     RLNLIDLAGSER+  T A G++LKEAQNINRSLSALGDVINALG   K  HVP+RNSKLT LLQDSLS N+KVLMF NI+PA  + GE+ CSLNFA RCRSV+LG +R+ G    L  Y  + + +   LA 
Sbjct:  468 RGVNFRSLEELFSLRDARAEEIEFSFVLSYLEIYNEQIRDLLVDPRRNGSADGKSKLDIRQSATGNV-VPGLTEVPVASTDEVAALMTRGAECRTVGSHDMNEHSSRSHSILTITAHGRSLTDGSTLTSRLNLIDLAGSERVSKTDATGERLKEAQNINRSLSALGDVINALGKKGKGGHVPFRNSKLTHLLQDSLSGNSKVLMFCNISPASYNVGETMCSLNFAARCRSVELGQARKGGESAELRKYKHMIQKLQDQLAS 727          
BLAST of mRNA_M-pyrifera_M_contig1178.3675.1 vs. uniprot
Match: A0A7S2WAZ0_9STRA (Kinesin-like protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WAZ0_9STRA)

HSP 1 Score: 231 bits (589), Expect = 5.220e-67
Identity = 132/247 (53.44%), Postives = 169/247 (68.42%), Query Frame = 1
Query:    1 RGVNFRALAELFAL-SSQDEGKEFQFRVSMLEVYNESIKDLLVEPGRPITSANKHDIRLDKRGKVYVEGLVECVVETLEEVEELAILGGRNRTVGNNNVNEHSSRSHLVLQVQIASTDLTTGYVQHGRLNLIDLAGSERIKSTAAEGQQLKEAQNINRSLSALGDVINALGSGNK---HVPYRNSKLTFLLQDSLSSNAKVLMFVNINPAPQSQGESSCSLNFAKRCRSVQLGISRRLGAR*SLA*Y 729
            RGVNFRAL  +F + + + + +E    VS+LE+YNE+++DLL E        +K D+R++K GKV+V+GL E    ++ +V     +   NR VG +N+NEHSSRSHLVL V I +T+  +G   +G LNLIDLAGSERI  T A G +LKEAQNIN+SLSALGDVI ALG G K   HVPYRNSKLT LLQ+SL  ++KV MFVNI+P   +  ES CSLNFA RCR VQLG +++ G    L  Y
Sbjct:  303 RGVNFRALERMFQIRNDRRDEEECSMTVSILEIYNETVRDLLGE------CRDKLDLRVNKEGKVFVQGLEENSANSMADVLNSMKIAQGNRAVGAHNMNEHSSRSHLVLTVHIETTNKVSGIKCNGSLNLIDLAGSERISKTDATGSRLKEAQNINKSLSALGDVIAALGEGGKKGQHVPYRNSKLTHLLQNSLGGDSKVAMFVNISPVRWNVSESICSLNFAARCRKVQLGQAKKNGDNQQLLKY 543          
BLAST of mRNA_M-pyrifera_M_contig1178.3675.1 vs. uniprot
Match: A0A3R7H6X9_9STRA (Kinesin-like protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H6X9_9STRA)

HSP 1 Score: 231 bits (589), Expect = 2.590e-66
Identity = 135/236 (57.20%), Postives = 168/236 (71.19%), Query Frame = 1
Query:    1 RGVNFRALAELFAL-SSQDEGKEF--QFRVSMLEVYNESIKDLLVEPGR----PITSANKHDIRLDKRGKVYVEGLVECVVETLEEVEELAILGGRNRTVGNNNVNEHSSRSHLVLQVQIASTDLTTGYVQHGRLNLIDLAGSERIKSTAAEGQQLKEAQNINRSLSALGDVINALGSGNKHVPYRNSKLTFLLQDSLSSNAKVLMFVNINPAPQSQGESSCSLNFAKRCRSVQLG 687
            RGVNFRAL ELF++   +  G  F    ++S+LEVYNE+I DLL   GR      + A   D+R+ K G VYV+ L+E  V    +V +L  LG  +R+VG+++ NEHSSRSHLVL + I +     G  +  +L+LIDLAGSER+  TAA GQ+LKEAQNINRSLSALGDVI ALG+ +KHVPYRNSKLTFLLQDSLS N+KVLMFVN++P   +  E+ CSLNFA RCRSV LG
Sbjct:  369 RGVNFRALRELFSIRDDRMAGGNFACSMKLSILEVYNETIMDLLEGGGRGTGQAASPAKGLDVRVGKTG-VYVDNLIEVEVFNEGDVLDLMRLGHSHRSVGSHDFNEHSSRSHLVLSILIETGLKAEGRRRVSKLHLIDLAGSERVSKTAASGQRLKEAQNINRSLSALGDVIAALGASSKHVPYRNSKLTFLLQDSLSGNSKVLMFVNVSPVQWNAWETLCSLNFASRCRSVALG 603          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1178.3675.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVQ4_ECTSI8.870e-13589.87Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
A0A835Z6H9_9STRA4.360e-10372.34Kinesin-like protein n=1 Tax=Tribonema minus TaxID... [more]
A0A7S1TQ83_9STRA1.410e-7863.16Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2PFW9_9STRA9.290e-7760.94Kinesin-like protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2WM98_9STRA1.420e-7271.76Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A2P4XLZ0_9STRA2.410e-7156.56Kinesin-like protein n=1 Tax=Phytophthora palmivor... [more]
A0A7S2GFV3_9STRA3.300e-7055.79Kinesin-like protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2W0I4_9STRA5.180e-7055.17Kinesin-like protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2WAZ0_9STRA5.220e-6753.44Kinesin-like protein n=1 Tax=labyrinthulid quahog ... [more]
A0A3R7H6X9_9STRA2.590e-6657.20Kinesin-like protein n=2 Tax=Phytophthora kernovia... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1178contigM-pyrifera_M_contig1178:9350..12948 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score378.3
Seed ortholog evalue2.4e-102
Seed eggNOG ortholog2880.D7FVQ4
KEGG koko:K10406
Hectar predicted targeting categoryother localisation
EggNOG free text desc.microtubule motor activity
EggNOG OGsCOG5059@1,KOG0239@2759
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04812
Exons5
Model size1149
Cds size630
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815695.4633942-UTR-M-pyrifera_M_contig1178:9349..97841622815695.4633942-UTR-M-pyrifera_M_contig1178:9349..9784Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig1178 9350..9784 -
1692277525.7492507-UTR-M-pyrifera_M_contig1178:9349..97841692277525.7492507-UTR-M-pyrifera_M_contig1178:9349..9784Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig1178 9350..9784 -
1622815695.53941-UTR-M-pyrifera_M_contig1178:12864..129481622815695.53941-UTR-M-pyrifera_M_contig1178:12864..12948Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig1178 12865..12948 -
1692277525.8293529-UTR-M-pyrifera_M_contig1178:12864..129481692277525.8293529-UTR-M-pyrifera_M_contig1178:12864..12948Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig1178 12865..12948 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815695.4746606-CDS-M-pyrifera_M_contig1178:9784..99101622815695.4746606-CDS-M-pyrifera_M_contig1178:9784..9910Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1178 9785..9910 -
1692277525.768232-CDS-M-pyrifera_M_contig1178:9784..99101692277525.768232-CDS-M-pyrifera_M_contig1178:9784..9910Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1178 9785..9910 -
1622815695.4895728-CDS-M-pyrifera_M_contig1178:10151..103191622815695.4895728-CDS-M-pyrifera_M_contig1178:10151..10319Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1178 10152..10319 -
1692277525.7834823-CDS-M-pyrifera_M_contig1178:10151..103191692277525.7834823-CDS-M-pyrifera_M_contig1178:10151..10319Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1178 10152..10319 -
1622815695.502917-CDS-M-pyrifera_M_contig1178:10534..107351622815695.502917-CDS-M-pyrifera_M_contig1178:10534..10735Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1178 10535..10735 -
1692277525.8004882-CDS-M-pyrifera_M_contig1178:10534..107351692277525.8004882-CDS-M-pyrifera_M_contig1178:10534..10735Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1178 10535..10735 -
1622815695.5147622-CDS-M-pyrifera_M_contig1178:12346..124721622815695.5147622-CDS-M-pyrifera_M_contig1178:12346..12472Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1178 12347..12472 -
1692277525.8110297-CDS-M-pyrifera_M_contig1178:12346..124721692277525.8110297-CDS-M-pyrifera_M_contig1178:12346..12472Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1178 12347..12472 -
1622815695.524868-CDS-M-pyrifera_M_contig1178:12855..128641622815695.524868-CDS-M-pyrifera_M_contig1178:12855..12864Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1178 12856..12864 -
1692277525.8201628-CDS-M-pyrifera_M_contig1178:12855..128641692277525.8201628-CDS-M-pyrifera_M_contig1178:12855..12864Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1178 12856..12864 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1178.3675.1prot_M-pyrifera_M_contig1178.3675.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig1178 9785..12864 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig1178.3675.1

>prot_M-pyrifera_M_contig1178.3675.1 ID=prot_M-pyrifera_M_contig1178.3675.1|Name=mRNA_M-pyrifera_M_contig1178.3675.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=210bp
MLEVYNESIKDLLVEPGRPITSANKHDIRLDKRGKVYVEGLVECVVETLE
EVEELAILGGRNRTVGNNNVNEHSSRSHLVLQVQIASTDLTTGYVQHGRL
NLIDLAGSERIKSTAAEGQQLKEAQNINRSLSALGDVINALGSGNKHVPY
RNSKLTFLLQDSLSSNAKVLMFVNINPAPQSQGESSCSLNFAKRCRSVQL
GISRRLGAR*
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mRNA from alignment at M-pyrifera_M_contig1178:9350..12948-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig1178.3675.1 ID=mRNA_M-pyrifera_M_contig1178.3675.1|Name=mRNA_M-pyrifera_M_contig1178.3675.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3599bp|location=Sequence derived from alignment at M-pyrifera_M_contig1178:9350..12948- (Macrocystis pyrifera P11B4 male)
AGGGGTGTAAATTTTCGAGCCTTGGCTGAGCTCTTCGCGCTATCATCGCA AGACGAGGGCAAGGAGTTCCAGTTTCGGGTCAGCATGCTCGAGGTAACAA ACACCTCGCTACAGGAAGAACAAGCTAGCGCCTTCGAGGTGTACGCTGAC TGTCTGTTGTTGAATACGTTAAATAAGTTTTAGACCAGAAAACACTACAG TAACGATACCCCCTTCGATGGCAGCGGTGTTACACAGCAGGCCTGTACGG TCGATACGACCCCCTGAACGTTCATGATACGTGTTATACGCTAGTGAGGA TTCACATTCCTTTCCCGTATGCGATGCTTGGGGTTGCAGCGCTTGGTGGA AGATGCATCGTCGACGCCAAGCGATGCAAATGTTTCGGGCAAGAAAGGGA AAACAAGGTCGCCCTGTATTACGCCAGTGGGGTCCGAACTAGCTGATGTG CACGCTGGCCCTATCCGATATCACAGGTGTATAACGAGTCCATCAAGGAC CTGTTGGTGGAGCCAGGCCGTCCAATAACATCTGCAAATAAACACGACAT ACGCTTGGATAAGAGGGGCAAGGTGTACGTCGAAGGGCTGGTTGAGTGTG TGGTAAGTGCTGAATCGATCCGAGCGCGCGCCACCCGTCTCGTAGTACCA TCTTGTGCCAGCGAGTGATATACTTATGGCAACATGTTTGCCGAGAAAAC CTGCCTATAGCCACTTTGCCAGCTTTAGGTGTTTTTAGGCACAGACCTTG CTTGGCGGCTTTGTTAGCTTAATATTCAAGAGTCGTTACATAGCAAGTAT CAACATACTGAACACTTTTAAAGGCGATCTTTCTTGAACACTCCTGTGCT GTGGTGTCGGAGCACTACTTCCGTGACCGATCGGGCGTTCTTGTGCACAA AGTTGTGTGATACCTGGCCATACGCAGTTACGAGTAGTGCGGGCACTCCC TTTTTTTGGTATGCCCCGTATTGAGCGAAAATTCGTCGTGTGCTCCTGTG CTGTATTCTATACCTAGTAGTGTGTAGCAGGGTCTGACGGATGACGGATG ATTACGCACACATAAAATACACCACGAAAACAGACGTTGCGTTTTCGCGA ACCTTTCAAAAATGAAGTTGTGCGAGACTCGCTGGTTATGACACAACACC ACGAGGGTTGTGTGACAAGACTACACCACATGTTGCCGCCGCTCGTACGC CATTCTGAACATGTTATTCTGGTGCAAGTTCGAACATCTTACATGGTTCT CTAGCAACTGGTCTTCAGCAAGGGGCTTGTTGGGTCATGGATTCTGAAGT CCTTGATATTATAGTTGATGGACAGTCACTACGCACGAGTACGAGTATCC ACCGAAGGCAATATGCAGCGAGAGTACAACTTCAGTAGCTCATCTTCGTT ATTCGGTAAATTGTGAGTTCAGCTCACATTTATCGTGACGTCGACAATGT CGTACGCCAGCTGTTGTCACCATGGGTACTAGGGAGTGTTTCTGTTTGAC GGACAGTCGGCCCGTAGACCACATGCATTTATACCCGTAGATTTTGCATC GTACCGAGATGACAAGACAATGGCTTACACCTGGCTTGATACTTTTTTCC CATTTAATATTTCTTTTCTCGGCTAGAAAGACGGCTGTCGCAGCTGGCCA GGAAGACGGCTGTTGCAGCTAGCACCCCCGTAAACGAAATGTACCATGGC GTCTGTCCACCGCATCCGCCTCTTTGCAGAATCTTTGCTTGAATCTCCCA TGAAAAGGGTGGTGCTGCCGTGGTAGACGGAGCTTGAATACTATTTTTGA ACAAACTCCTTCGCACTTGAAATATTAGGGATCGTTTCTCGAAGTTCTTG GCAGAACTTGACGAACTCAGCGAGACGTGGTGCTAGTCGATGCTATTCCA CGGCTCAGAACCTGTTGGAATGATGCGTGTCGTTTGATATTCTACAGGCT GCACAAAGCATTTGCGTAGCGGTGGTGCAGTGACTACACATCAACTACGT ATGTATGGACTTCAGACTCCACACTACAACAGTCTGTCTCACTTTGCAGA CTGTACCCGTCCTGTACTCTTAACCTAGCTTCTTCGATCGGATTTGTCTG TTGACCTCAGTAAGAAACTAGGGTAATCACGCACGCAACAGTACGATGGT GCACCGCAAAAATGACAATCCATGCGTGTGCATGCATGTTATGTCCTGAT GCGCTTGCCGAAGGTGGAAACCCTGGAAGAGGTGGAAGAGCTCGCTATTT TAGGTGGAAGAAATCGCACCGTAGGAAACAACAATGTCAACGAGCATTCC TCGCGCAGCCATCTTGTACTTCAGGTGCAGATCGCGAGCACAGATTTAAC GACTGGATACGTGCAGCACGGCAGGCTGAATCTCATCGACCTGGCCGGCA GTGAGCGAATTAAGGCAAGACACGCTTGCAGAAAACATTTTCACGTCTCC CCGTTTGTCAGGCACCATAAACTAGTATTGCCCCCCGAGGGATAGGTTAT CGCAAGATATATGCATGTGTTGTAGTGTGCAGTTTTTGCTGCAACACACT ATATAACCCACAAACGGAGAACAAAATATGTTTATGCTTACCCCCAGCAC CCTTGTTCGATCCCGACACCGTCCTAAAGTCGACCGCGGCAGAGGGCCAG CAGCTGAAAGAGGCCCAAAACATCAACCGGTCGCTAAGTGCGCTCGGCGA TGTCATCAACGCGCTAGGGTCGGGCAACAAACACGTCCCCTACAGGAACT CGAAGCTGACGTTCTTGCTCCAGGACTCTTTGTCGTCCAATGCTAAGGCG AGTGAAAAGTCCTGTTTCCGGTTTCCCAATCTGCGTTGAGAAGTACCTCG TCCTCGTGCTATGTATGTCTATGGATGATAACGCAACGGTTAGGGCTCTC GCTCATATCTAGGTGTGTGGTCGATGTGTTTATGATCGATGAGTTCAAGG TAGGGACGCGCGATTAGCATTGCTATAGTGCCTGGGGCGGAAAATAATTT CGTCCCCTGCAACCCCTCGCGTATGCTTTTTCGAACAGGTGTTGATGTTT GTCAACATTAATCCCGCGCCGCAGAGCCAAGGAGAGTCCTCGTGTAGTCT CAATTTCGCGAAGCGGTGTCGTTCTGTCCAGCTTGGAATCTCAAGGCGGC TCGGGGCACGGTGAAGCCTTGCTTAGTACACATGGTTAGATAGGATCATC TATGTTTATTTAGCTGACGTGCTGATGTGCGAGTACTGTTGTATCACCAT GGTGCCATGAGGCAGTAGACGTAAATATGCTGGATGCAAAGCATTACCAC AGTTTCACCGGGTACAATACTGCAATGTGCCGTCGTAGTAGATATGGTCC TGTGAGCAAATCGTTCGAAGATAGGACGGCATGGGCAGCGGGCAGCATCA GATAGGACGGTGGCGTACTTCACGACAGGGAGTGTCAAAATCATGTTGTG TAACGCCCCTTCAACGAGTATATTGTATCCTGTCATGATAAGGAACACCC TATTTGAGGGTATGTTGACGTTGCAACTTTCTACTTTCTCCGGCAGCCGG TAGTATCCACGGATTGGCGTCATATTTCTGTTGTATCAATACCAATATT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig1178:9350..12948-

>mRNA_M-pyrifera_M_contig1178.3675.1 ID=mRNA_M-pyrifera_M_contig1178.3675.1|Name=mRNA_M-pyrifera_M_contig1178.3675.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1260bp|location=Sequence derived from alignment at M-pyrifera_M_contig1178:9350..12948- (Macrocystis pyrifera P11B4 male)
ATGCTCGAGATGCTCGAGGTGTATAACGAGTCCATCAAGGACCTGTTGGT
GGAGCCAGGCCGTCCAATAACATCTGCAAATAAACACGACATACGCTTGG
ATAAGAGGGGCAAGGTGTACGTCGAAGGGCTGGTTGAGTGTGTGGTGTAT
AACGAGTCCATCAAGGACCTGTTGGTGGAGCCAGGCCGTCCAATAACATC
TGCAAATAAACACGACATACGCTTGGATAAGAGGGGCAAGGTGTACGTCG
AAGGGCTGGTTGAGTGTGTGGTGGAAACCCTGGAAGAGGTGGAAGAGCTC
GCTATTTTAGGTGGAAGAAATCGCACCGTAGGAAACAACAATGTCAACGA
GCATTCCTCGCGCAGCCATCTTGTACTTCAGGTGCAGATCGCGAGCACAG
ATTTAACGACTGGATACGTGCAGCACGGCAGGCTGAATCTCATCGACCTG
GCCGGCAGTGAGCGAATTAAGGTGGAAACCCTGGAAGAGGTGGAAGAGCT
CGCTATTTTAGGTGGAAGAAATCGCACCGTAGGAAACAACAATGTCAACG
AGCATTCCTCGCGCAGCCATCTTGTACTTCAGGTGCAGATCGCGAGCACA
GATTTAACGACTGGATACGTGCAGCACGGCAGGCTGAATCTCATCGACCT
GGCCGGCAGTGAGCGAATTAAGTCGACCGCGGCAGAGGGCCAGCAGCTGA
AAGAGGCCCAAAACATCAACCGGTCGCTAAGTGCGCTCGGCGATGTCATC
AACGCGCTAGGGTCGGGCAACAAACACGTCCCCTACAGGAACTCGAAGCT
GACGTTCTTGCTCCAGGACTCTTTGTCGTCCAATGCTAAGTCGACCGCGG
CAGAGGGCCAGCAGCTGAAAGAGGCCCAAAACATCAACCGGTCGCTAAGT
GCGCTCGGCGATGTCATCAACGCGCTAGGGTCGGGCAACAAACACGTCCC
CTACAGGAACTCGAAGCTGACGTTCTTGCTCCAGGACTCTTTGTCGTCCA
ATGCTAAGGTGTTGATGTTTGTCAACATTAATCCCGCGCCGCAGAGCCAA
GGAGAGTCCTCGTGTAGTCTCAATTTCGCGAAGCGGTGTCGTTCTGTCCA
GCTTGGAATCTCAAGGCGGCTCGGGGCACGGTGAGTGTTGATGTTTGTCA
ACATTAATCCCGCGCCGCAGAGCCAAGGAGAGTCCTCGTGTAGTCTCAAT
TTCGCGAAGCGGTGTCGTTCTGTCCAGCTTGGAATCTCAAGGCGGCTCGG
GGCACGGTGA
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