mRNA_M-pyrifera_M_contig117758.3662.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig117758.3662.1 vs. uniprot
Match: A0A7S4MKX5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MKX5_9EUKA) HSP 1 Score: 160 bits (404), Expect = 3.840e-44 Identity = 75/138 (54.35%), Postives = 106/138 (76.81%), Query Frame = 1
Query: 1 YLPMAVLGYWAYGDSALSPIYRNICTDGD--DCTYWQLLGIWLAVLALTVHVILAYAVILHPTERLLEQLLGVDKLRQPKGKIASVCLRTAIMAATVIVACLVPDFTDFMNLVSSLSSTFTSFVFPCFFHAVIFWKDV 408
Y+PMAV+GY+A+GD LSPIY N+CTDG CTY + LG WLA+ A+T+HV+L++A++++PTE LE+L+G+ K PK K+ V LRT ++ TV++A ++PDF DF+NLVSS ++T TSFVFPC FH V+FW +
Sbjct: 333 YIPMAVVGYYAFGDETLSPIYDNLCTDGSGSSCTYGEQLGKWLAIFAVTLHVMLSFAIVINPTELALERLVGIKKWENPKRKLIGVSLRTCLVVLTVLIAEVIPDFGDFLNLVSSCTNTATSFVFPCLFHLVLFWPTL 470
BLAST of mRNA_M-pyrifera_M_contig117758.3662.1 vs. uniprot
Match: A0A2P6NW86_9EUKA (Aa_trans domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NW86_9EUKA) HSP 1 Score: 74.7 bits (182), Expect = 5.880e-13 Identity = 45/136 (33.09%), Postives = 77/136 (56.62%), Query Frame = 1
Query: 1 YLPMAVLGYWAYGDSALSPIYRNICTDGDDCTYWQLLGIWLAVLALTVHVILAYAVILHPTERLLEQLLGVDKLRQPKGKIASVCLRTAIMAATVIVACLVPDFTDFMNLVSSLSSTFTSFVFPCFFHAVIFWKDV 408
YLP A+L Y +GD+ SP+ ++ T + + I LA++A+T+H+ L ++ +P E++ +DK + + + RTAI+A V+VAC+V DF DFM+L+ S + T F FPC + + W ++
Sbjct: 670 YLPPAILPYIYFGDAVKSPVLESLSTAVAGLSRSYTVPIDLALVAITLHLWLTIPILNNPVFLYFEEVTRLDKAKA--APVYRILYRTAILALQVLVACVVKDFGDFMDLLGSTVISATVFFFPCLMYLKLNWNNI 803
BLAST of mRNA_M-pyrifera_M_contig117758.3662.1 vs. uniprot
Match: A0A6T2CKH0_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A6T2CKH0_9EUGL) HSP 1 Score: 70.5 bits (171), Expect = 1.600e-11 Identity = 47/138 (34.06%), Postives = 76/138 (55.07%), Query Frame = 1
Query: 1 YLPMAVLGYWAYGDSALSPIYRNICTDGDDCTYWQLLGIWLAVLALTVHVILAYAVILHPTERLLE-QLLGVDKLRQP----KGKIAS-----VCLRTAIMAATVIVACLVPDFTDFMNLVSSLSSTFTSFVFPCFFH 384
YLP+AV+GYWA+GD PI++N + + + V+ L HV+++YA+I++P E E Q++ K+R K + + + LR + TV +A VP F ++LVSS++ T TSF+FP F+
Sbjct: 285 YLPVAVIGYWAFGDKVQDPIFKN----------FDSAAVNVVVVLLLAHVVMSYAIIMNPPELAFEDQVVDCIKVRSSSALQKALVGNRWPLRLVLRLCLTGLTVFIAKAVPCFPVLLSLVSSVTGTTTSFIFPVLFY 412
BLAST of mRNA_M-pyrifera_M_contig117758.3662.1 vs. uniprot
Match: A0A7S1NFX0_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NFX0_9EUGL) HSP 1 Score: 67.8 bits (164), Expect = 1.400e-10 Identity = 50/146 (34.25%), Postives = 79/146 (54.11%), Query Frame = 1
Query: 1 YLPMAVLGYWAYGDSALSPIYRNICTDGDDCTYWQLLGIWLAVLALTVHVILAYAVILHPTERLLE-QLLGVDKLRQPKGKI---------ASVCLRTAIMAATVIVACLVPDFTDFMNLVSSLSSTFTSFVFPCFFHAVIFWKDV 408
YLP+AV+GYWA+GD PI++N + I + +L L VHV+++YA+I++P E LE Q++ + Q + + LR + T+ +A VP F ++LVSS++ T TSF+FP F+ + KDV
Sbjct: 282 YLPVAVIGYWAFGDKVADPIFKN----------FDSAAINIVILLLLVHVMMSYAIIMNPPELALEDQVVKMINGSQHAQLLHFASHHRWSLRMLLRIGLTLLTMGIARAVPCFPILLSLVSSVTGTTTSFIFPVLFYRRVV-KDV 416
BLAST of mRNA_M-pyrifera_M_contig117758.3662.1 vs. uniprot
Match: A0A4Y2NH25_ARAVE (Aa_trans domain-containing protein n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2NH25_ARAVE) HSP 1 Score: 57.0 bits (136), Expect = 8.140e-7 Identity = 41/128 (32.03%), Postives = 69/128 (53.91%), Query Frame = 1
Query: 1 YLPMAVLGYWAYGDSALSPIYRNICTDGDDCTYWQLLGIWLAVLALTVHVILAYAVILHPTERLLEQLLGVDKLRQPKGKIASVCLRTAIMAATVIVACLVPDFTDFMNLVSSLSSTFTSFVFPCFFH 384
Y+P+AVLGY+ YGD ++ + D + + ++V+ L +H+ A+ ++++ + LE+ + K K V LRTA+M A V VA +P F +NLV ++T TS +FPC F+
Sbjct: 271 YMPVAVLGYYVYGDHLVANVL--------DSLPFSIAKSAISVM-LALHMFFAFLLVINAPVQDLEEFFKLPKTFGWKR----VTLRTAVMVAAVFVALSIPRFGKVLNLVGGSATTLTSVIFPCVFY 385
BLAST of mRNA_M-pyrifera_M_contig117758.3662.1 vs. uniprot
Match: A0A367KV43_RHIST (Aa_trans domain-containing protein n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367KV43_RHIST) HSP 1 Score: 56.6 bits (135), Expect = 1.100e-6 Identity = 41/128 (32.03%), Postives = 67/128 (52.34%), Query Frame = 1
Query: 1 YLPMAVLGYWAYGDSALSPIYRNICTDGDDCTYWQLLGIWLAVLALTVHVILAYAVILHPTERLLEQLLGVDKLRQPKGKIASVCLRTAIMAAT----VIVACLVPDFTDFMNLVSSLSSTFTSFVFP 372
Y A+ GY+++G S SP+Y+++ +G G L+++ +T+HVILA + EQ + R GKI + +R+ I A T V++AC +P F DFM L+ +LS+ F+ P
Sbjct: 273 YFLAAISGYYSFGSSVQSPVYKSL-PEGS--------GKLLSMIVMTIHVILAIPIFSTSFSLEFEQFVNCTDERY--GKIGAWAIRSTIRACTMTILVVLACFIPYFDDFMGLIGALSTCGLVFLLP 389
BLAST of mRNA_M-pyrifera_M_contig117758.3662.1 vs. uniprot
Match: UPI001FB0CB0E (amino acid transporter AVT1C-like n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB0CB0E) HSP 1 Score: 55.5 bits (132), Expect = 2.900e-6 Identity = 38/125 (30.40%), Postives = 68/125 (54.40%), Query Frame = 1
Query: 1 YLPMAVLGYWAYGDSALSPIYRNICTDGDDCTYWQLLGIWLAVLALTVHVILAYAVILHPTERLLEQLLGVDKLRQPKGKIASVCLRTAIMAATVIVACLVPDFTDFMNLVSSLSSTFTSFVFPC 375
Y +AV+GY +G+S LS N+ + L+ +AV V+ + YA+ + P LE+L+ ++L K + ++C+RTA++ +T++VA +P F M L+ SL + + +FPC
Sbjct: 390 YASVAVMGYMMFGESTLSQFTLNMPQN--------LVSSKVAVWTTVVNPLTKYALTMTPVALALEELIPSNQL---KSHVYAICIRTALVISTLLVALSIPFFGLVMALIGSLLTMLVTLIFPC 503
BLAST of mRNA_M-pyrifera_M_contig117758.3662.1 vs. uniprot
Match: UPI0008F9B9E9 (lysine histidine transporter-like 2 n=1 Tax=Bemisia tabaci TaxID=7038 RepID=UPI0008F9B9E9) HSP 1 Score: 55.1 bits (131), Expect = 3.830e-6 Identity = 40/128 (31.25%), Postives = 69/128 (53.91%), Query Frame = 1
Query: 1 YLPMAVLGYWAYGDSALSPIYRNICTDGDDCTYWQLLGIWLAVLALTVHVILAYAVILHPTERLLEQLLGVDKLRQPKGKIASVCLRTAIMAATVIVACLVPDFTDFMNLVSSLSSTFTSFVFPCFFH 384
Y P+ + GY+ YGDS I N+ T + LA +A+ +H+ILA+ +I++P + LE++L V P+ + +RT ++ +IV VP F+ ++LV + T T+FV P +F+
Sbjct: 289 YSPLVIGGYYIYGDS----IQPNVVMSLSHTTL-----VSLANIAMAIHLILAFLIIINPVCQDLEEMLQVP----PEFCLKRCIVRTCMIMLMIIVGATVPRFSKILSLVGGSTITLTTFVLPNYFY 403
BLAST of mRNA_M-pyrifera_M_contig117758.3662.1 vs. uniprot
Match: A9SV11_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9SV11_PHYPA) HSP 1 Score: 53.5 bits (127), Expect = 1.320e-5 Identity = 44/138 (31.88%), Postives = 70/138 (50.72%), Query Frame = 1
Query: 1 YLPMAVLGYWAYGDSALSPIYRNICTD-GDDCTYWQLLGIW-LAVLALTVHVILAYAVILHPTERLLEQLLGVDKLRQPKGKIASVC----LRTAIMAATVIVACLVPDFTDFMNLVSSLSSTFTSFVFPCFFHAVIF 396
+ P+A+ GYWA+G+ A I N+ D G D LLGI +A++A + + L Y L P +LE G K Q K I +V R+ +A ++A ++P F D ++L+ + T FV P F+ ++F
Sbjct: 283 FYPVAISGYWAFGNQASGNIVDNLAPDKGPDLLPTWLLGILSIAIVAQLLAIGLVY---LQPISEVLESKTGDAK--QGKYSIRNVMPRLVFRSLYLAVVTLLAAMLPFFGDIISLIGAFGYTPLDFVLPMLFYQIVF 415
BLAST of mRNA_M-pyrifera_M_contig117758.3662.1 vs. uniprot
Match: UPI001CFA188A (amino acid transporter AVT1C-like n=1 Tax=Mangifera indica TaxID=29780 RepID=UPI001CFA188A) HSP 1 Score: 52.0 bits (123), Expect = 4.670e-5 Identity = 37/125 (29.60%), Postives = 65/125 (52.00%), Query Frame = 1
Query: 1 YLPMAVLGYWAYGDSALSPIYRNICTDGDDCTYWQLLGIWLAVLALTVHVILAYAVILHPTERLLEQLLGVDKLRQPKGKIASVCLRTAIMAATVIVACLVPDFTDFMNLVSSLSSTFTSFVFPC 375
Y +AV+GY +G+S +S N+ D L+ +AV V+ YA+ + P LE+L+ + L K + ++C+RTA++ +T++VA VP F M+L+ S + + + PC
Sbjct: 390 YAGVAVMGYTMFGESTMSQFTLNMPKD--------LVASKIAVWTTVVNPFTKYALTMSPVALSLEELIPSNHL---KSHVYAICIRTALVLSTLLVALTVPFFGLVMSLIGSSLTMLVTLILPC 503 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117758.3662.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig117758.3662.1 >prot_M-pyrifera_M_contig117758.3662.1 ID=prot_M-pyrifera_M_contig117758.3662.1|Name=mRNA_M-pyrifera_M_contig117758.3662.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=133bp MAVLGYWAYGDSALSPIYRNICTDGDDCTYWQLLGIWLAVLALTVHVILAback to top mRNA from alignment at M-pyrifera_M_contig117758:3..547+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig117758.3662.1 ID=mRNA_M-pyrifera_M_contig117758.3662.1|Name=mRNA_M-pyrifera_M_contig117758.3662.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=545bp|location=Sequence derived from alignment at M-pyrifera_M_contig117758:3..547+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig117758:3..547+ >mRNA_M-pyrifera_M_contig117758.3662.1 ID=mRNA_M-pyrifera_M_contig117758.3662.1|Name=mRNA_M-pyrifera_M_contig117758.3662.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=798bp|location=Sequence derived from alignment at M-pyrifera_M_contig117758:3..547+ (Macrocystis pyrifera P11B4 male)back to top |