mRNA_M-pyrifera_M_contig117755.3661.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig117755.3661.1 vs. uniprot
Match: A0A349B1S4_9ACTN (VanY domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349B1S4_9ACTN) HSP 1 Score: 171 bits (433), Expect = 3.200e-48 Identity = 111/212 (52.36%), Postives = 136/212 (64.15%), Query Frame = 1
Query: 1 DELGVLAEARDAQAALTAEAEDRLDHELSELASIQELDAQLASQEQAEVDRLAAELAKKRAAEAAPTAAPSTSXXXXXXG----------------------------VGTGEITSVRGIQIHQSIAGNLESMLAAASADGVQLSGGGYRNPAGQIAVRKNNCGTSYYAIYEMPSSSCSPPTARPGRSMHEQGKAIDFTYGGRIIGSRSSPA 552
++L + +A Q A+ AE +DRLDH LSE S+ ELD +LA+Q + E RLAAEL +++ A XXXXXX G+G I SVRGI++H SIA ++ MLAAA A G+ L+GGGYR+PAGQIAVR+NNCGTS YAIY+MP+SSC PPTARPG SMHE+G AIDFTYGGRII SRSS A
Sbjct: 192 EQLQEVQQATSQQEAVVAEVQDRLDHRLSEAQSLAELDRELAAQIEEEQARLAAELERQQRAREQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRTIAITGSGSIVSVRGIRVHNSIASSVADMLAAADAAGISLAGGGYRDPAGQIAVRRNNCGTSSYAIYQMPASSCRPPTARPGTSMHERGLAIDFTYGGRIISSRSSAA 403
BLAST of mRNA_M-pyrifera_M_contig117755.3661.1 vs. uniprot
Match: A0A7X6P342_9ACTN (VanY domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6P342_9ACTN) HSP 1 Score: 168 bits (426), Expect = 3.000e-47 Identity = 101/187 (54.01%), Postives = 128/187 (68.45%), Query Frame = 1
Query: 1 DELGVLAEARDAQAALTAEAEDRLDHELSELASIQELDAQLASQEQAEVDRLAAELAKKRAAEAAPTAAPSTSXXXXXXG-----VGTGEITSVRGIQIHQSIAGNLESMLAAASADGVQLSGGGYRNPAGQIAVRKNNCGTSYYAIYEMPSSSCSPPTARPGRSMHEQGKAIDFTYGGRIIGSRSS 546
+ L L A+D L AE E R++ ++E AS++ LD+ LA Q ++ LA +AK+RAA AA A + G +GEIT+V GI++H SIAGNL+S+L AASADG+ GGGYR+ AGQIA R+NNCG+S YAIYEMPSSSCSPPTARPG SMHE+G AIDFT GGR + +RSS
Sbjct: 209 ERLTKLESAQDEHERLAAEVESRIERAMAEAASLESLDSTLAGQISSQQTVLANAVAKERAAAAARARAVGATTRPSSGGSAGPVASSGEITTVGGIRVHNSIAGNLQSLLNAASADGINFGGGGYRDSAGQIATRRNNCGSSSYAIYEMPSSSCSPPTARPGSSMHERGLAIDFTQGGRTL-TRSS 394
BLAST of mRNA_M-pyrifera_M_contig117755.3661.1 vs. uniprot
Match: UPI001D0FAA8D (D-alanyl-D-alanine carboxypeptidase family protein n=1 Tax=Aquihabitans sp. Kera 3 TaxID=2884263 RepID=UPI001D0FAA8D) HSP 1 Score: 161 bits (408), Expect = 1.940e-44 Identity = 100/196 (51.02%), Postives = 127/196 (64.80%), Query Frame = 1
Query: 1 DELGVLAEARDAQAALTAEAEDRLDHELSELASIQELDAQLASQEQAEVDRLAAELAKKRAAEAAPTAAPSTSXXXXXXG--------------VGTGEITSVRGIQIHQSIAGNLESMLAAASADGVQLSGGGYRNPAGQIAVRKNNCGTSYYAIYEMPSSSCSPPTARPGRSMHEQGKAIDFTYGGRIIGSRSS 546
D LG L A + Q A A+ + R+D LSE S+ +DA L+S ++ +A LA +RAA A + A + G G+GEI SV GI++HQSIAGNL+ +L+AASA G+ SGGGYR+P+GQIAVRK+NCGTS YAIYEMP+SSCSPPTARPG+SMHE+G AIDFT GG + SS
Sbjct: 220 DRLGDLNAAYEKQQAFAAQVDARIDRALSEADSLASVDANLSSSISSKQAEIAKALAAQRAA--AESRAKAARVTLKGSGXXXXXXXXXVPPTITGSGEIVSVGGIRVHQSIAGNLQRLLSAASAAGINFSGGGYRDPSGQIAVRKSNCGTSNYAIYEMPASSCSPPTARPGQSMHERGLAIDFTQGGSTLSRGSS 413
BLAST of mRNA_M-pyrifera_M_contig117755.3661.1 vs. uniprot
Match: A0A431IC34_9ACTN (VanY domain-containing protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A431IC34_9ACTN) HSP 1 Score: 159 bits (403), Expect = 1.010e-43 Identity = 103/198 (52.02%), Postives = 126/198 (63.64%), Query Frame = 1
Query: 1 DELGVLAEARDAQAALTAEAEDRLDHELSELASIQELDAQLASQEQAEVDRLAAELAKKRAA-EAAPTAAPSTSXXXXXXG---------------VGTGEITSVRGIQIHQSIAGNLESMLAAASADGVQLSGGGYRNPAGQIAVRKNNCGTSYYAIYEMPSSSCSPPTARPGRSMHEQGKAIDFTYGGRIIGSRSS 546
D LG L A Q A A+ + RLD LSE S+ +D+ L+S A+ +A LA +RAA E+ AA T X G+GEI SV GI++HQSIAGNL+ +L AASA G+ LSGGGYR+PAGQIAVR+NNCG+S+YAIYE P+SSCSPPTARPG SMHE+G AIDFT GG + SS
Sbjct: 214 DRLGDLNAAFQKQQAFAAQVDSRLDRALSEADSLASIDSNLSSTISAKQAEIARALAAQRAAAESRARAARVTLKAPSGXXXXXXXXXXXXVPATITGSGEIVSVGGIRVHQSIAGNLQGLLNAASAAGINLSGGGYRDPAGQIAVRRNNCGSSHYAIYEAPASSCSPPTARPGSSMHERGLAIDFTQGGSTLSRGSS 411
BLAST of mRNA_M-pyrifera_M_contig117755.3661.1 vs. uniprot
Match: A0A6L5ZFV2_9ACTN (VanY domain-containing protein n=7 Tax=root TaxID=1 RepID=A0A6L5ZFV2_9ACTN) HSP 1 Score: 155 bits (393), Expect = 4.180e-42 Identity = 95/200 (47.50%), Postives = 124/200 (62.00%), Query Frame = 1
Query: 37 QAALTAEAEDRLDHELSELASIQELDAQLASQEQAEVDRLAAELAKKRAAEAAPTAAPSTSXXXXXXG------------------------------VGTGEITSVRGIQIHQSIAGNLESMLAAASADGVQLSGGGYRNPAGQIAVRKNNCGTSYYAIYEMPSSSCSPPTARPGRSMHEQGKAIDFTYGGRIIGSRSS 546
Q A A+ E+RL+ L+E S+ DAQL+S ++ +A +A +RAA++A A ++ G G+GEI +V GI+IHQS+AGNL+S+LAAASA G+ GGGYR+PAGQIAVR+NNCG+S YAIYEMP+SSCSPPTARPG SMHE+G A+DFT GGR + SS
Sbjct: 231 QQAFAAKVEERLNSALAEADSLAATDAQLSSSITSKQAEIAKAVAAQRAADSARAAQRASQSKPAVSGXXXXXXXXXXXXXXXXXXXXXXXXXTPPNITGSGEIVNVGGIRIHQSMAGNLQSLLAAASAAGINFGGGGYRDPAGQIAVRRNNCGSSNYAIYEMPASSCSPPTARPGTSMHERGLAVDFTQGGRTLSRGSS 430
BLAST of mRNA_M-pyrifera_M_contig117755.3661.1 vs. uniprot
Match: A0A7V9EXD0_9ACTN (D-alanyl-D-alanine carboxypeptidase family protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V9EXD0_9ACTN) HSP 1 Score: 150 bits (378), Expect = 3.720e-40 Identity = 94/202 (46.53%), Postives = 121/202 (59.90%), Query Frame = 1
Query: 22 EARDAQAALTAEAEDRLDHELSELASIQELDAQLASQEQAEVDRLAAELAKKRAAEAAPT----AAP----------------------STSXXXXXXGVGTGEITSVRGIQIHQSIAGNLESMLAAASADGVQLSGGGYRNPAGQIAVRKNNCGTSYYAIYEMPSSSCSPPTARPGRSMHEQGKAIDFTYGGRIIGSRSSP 549
+ARD QA A E RLD L+E A++ +LDA LA Q A+ +RLAA L +AA A PT ++P ST G+G I SV GI++ IA L ++L A+ADG SGGGYR+P+ Q+A+R++NCG+S YA+Y MP+S CSPPTARPG SMHEQG A+DFTY G +I SRS P
Sbjct: 197 QARDQQADFAASVEQRLDATLAEAAALADLDADLAGQIAADEERLAARLRAAQAARARPTPDAASSPAXXXXXXXXXXXXXXXXXXXXRSTPAPPPASIAGSGPIVSVSGIRVSSQIADQLRALLDDAAADGHAFSGGGYRDPSAQVALRRSNCGSSDYAVYSMPASQCSPPTARPGASMHEQGLAVDFTYNGSLITSRSDP 398
BLAST of mRNA_M-pyrifera_M_contig117755.3661.1 vs. uniprot
Match: A0A349B4W1_9ACTN (VanY domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349B4W1_9ACTN) HSP 1 Score: 137 bits (346), Expect = 4.430e-38 Identity = 79/146 (54.11%), Postives = 99/146 (67.81%), Query Frame = 1
Query: 115 AQLASQEQAEVDRLAAELAKKRAAEAAPTAAPSTSXXXXXXGVGTGEITSVRGIQIHQSIAGNLESMLAAASADGVQLSGGGYRNPAGQIAVRKNNCGTSYYAIYEMPSSSCSPPTARPGRSMHEQGKAIDFTYGGRIIGSRSSPA 552
AQLA+++ A RLAA+ AA AA +S G+G I SVRGI+IHQSIA NL +L+AA +DG+ LSG GYR+ QI +R+ NCG+S Y +Y+M S+CSPPTARPG S HE+G A+DFTYGG I SRSSPA
Sbjct: 3 AQLAAEQAALAKRLAAQ-------RAAAAAAQRSSGPVTISITGSGSIVSVRGIRIHQSIADNLAGLLSAAQSDGISLSGWGYRDSQRQIQLRRQNCGSSNYQVYQMSPSACSPPTARPGASNHERGLAVDFTYGGSTIKSRSSPA 141
BLAST of mRNA_M-pyrifera_M_contig117755.3661.1 vs. uniprot
Match: UPI001F1BB9B9 (D-alanyl-D-alanine carboxypeptidase family protein n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001F1BB9B9) HSP 1 Score: 136 bits (343), Expect = 3.930e-35 Identity = 90/182 (49.45%), Postives = 118/182 (64.84%), Query Frame = 1
Query: 4 ELGVLAEARDAQAALTAEAEDRLDHELSELASIQELDAQLASQEQAEVDRLAAELAKK-RAAEAAPTAAPSTSXXXXXXGVGTGEITSVRGIQIHQSIAGNLESMLAAASADGVQLSGGGYRNPAGQIAVRKNNCGTSYYAIYEMPSSSCSPPTARPGRSMHEQGKAIDFTYGGRIIGSRSS 546
+LG + AR QA A+ + RLD L E A+++E D +L+ AE+ R AELA++ R A+P A XX G + +VRGI + SIAG ESMLAAA+ADG+ LSG GYR+ + QI +R+ +CG+S YA+Y+MP+ C PPTARPG S HEQG AIDFT GGR + SRSS
Sbjct: 209 QLGEVQAARAQQAQFAAQVQQRLDARLGEAAALEETDRELS----AEISRREAELAERLRRMSASPAAGXXXXXXPPIPVSGPIALANVRGIVVAASIAGQTESMLAAAAADGIVLSGTGYRDISRQIELRRQHCGSSEYALYQMPAEQCRPPTARPGASKHEQGLAIDFTEGGRTL-SRSS 385
BLAST of mRNA_M-pyrifera_M_contig117755.3661.1 vs. uniprot
Match: A0A7Y2N7I0_9ACTN (VanY domain-containing protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2N7I0_9ACTN) HSP 1 Score: 131 bits (329), Expect = 2.790e-33 Identity = 85/183 (46.45%), Postives = 110/183 (60.11%), Query Frame = 1
Query: 4 ELGVLAEARDAQAALTAEAEDRLDHELSELASIQELDAQLASQEQAEVDRLAAELAKKRAAEAAPTAAPSTSXXXXXXGVGTGEITSVR-GIQIHQSIAGNLESMLAAASADGVQLSGGGYRNPAGQIAVRKNNCGTSYYAIYEMPSSSCSPPTARPGRSMHEQGKAIDFTYGGRIIGSRSSP 549
+L L A + A + A AE+RLDH L+E S+ ELDA ++++ A + L +L A P + P VG G+I G+ +H SIA ++ ++ AA ADG+ L GGGYR+ QI +R+ +CGTS YAIYEM S C PPTARPG SMHEQGKAIDFTY G II RS P
Sbjct: 189 DLATLQGASEEHAVVLAAAEERLDHLLAERQSLAELDASVSTRLSA-AEALLVDLLS--GANGLPGSRPVL--------VGAGDIVHAGFGVMVHVSIAADVTALFEAAHADGINLGGGGYRDSEAQIRLRRKHCGTSDYAIYEMSPSKCRPPTARPGSSMHEQGKAIDFTYNGSIIKRRSGP 360
BLAST of mRNA_M-pyrifera_M_contig117755.3661.1 vs. uniprot
Match: A0A6N7FQI5_9ACTN (VanY domain-containing protein (Fragment) n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6N7FQI5_9ACTN) HSP 1 Score: 124 bits (310), Expect = 5.940e-33 Identity = 68/120 (56.67%), Postives = 82/120 (68.33%), Query Frame = 1
Query: 193 APTAAPSTSXXXXXXGVGTGEITSVRGIQIHQSIAGNLESMLAAASADGVQLSGGGYRNPAGQIAVRKNNCGTSYYAIYEMPSSSCSPPTARPGRSMHEQGKAIDFTYGGRIIGSRSSPA 552
AP+ AP+ S V + +VRGI++ IA L +MLAAA DG+ L GGG+R+P QIA+R + CGTS YAI+EMPS CSPP ARPGRSMHEQG AIDFT G +I SRS PA
Sbjct: 1 APSEAPTVSASRSGGNVA---LATVRGIEVAAEIADQLAAMLAAADVDGIVLEGGGWRSPDDQIAIRMDVCGTSEYAIWEMPSWECSPPVARPGRSMHEQGLAIDFTADGDLIRSRSHPA 117 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117755.3661.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig117755.3661.1 >prot_M-pyrifera_M_contig117755.3661.1 ID=prot_M-pyrifera_M_contig117755.3661.1|Name=mRNA_M-pyrifera_M_contig117755.3661.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=184bp DELGVLAEARDAQAALTAEAEDRLDHELSELASIQELDAQLASQEQAEVDback to top mRNA from alignment at M-pyrifera_M_contig117755:2..553+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig117755.3661.1 ID=mRNA_M-pyrifera_M_contig117755.3661.1|Name=mRNA_M-pyrifera_M_contig117755.3661.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=552bp|location=Sequence derived from alignment at M-pyrifera_M_contig117755:2..553+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig117755:2..553+ >mRNA_M-pyrifera_M_contig117755.3661.1 ID=mRNA_M-pyrifera_M_contig117755.3661.1|Name=mRNA_M-pyrifera_M_contig117755.3661.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1104bp|location=Sequence derived from alignment at M-pyrifera_M_contig117755:2..553+ (Macrocystis pyrifera P11B4 male)back to top |