mRNA_M-pyrifera_M_contig117418.3595.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig117418.3595.1
Unique NamemRNA_M-pyrifera_M_contig117418.3595.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig117418.3595.1 vs. uniprot
Match: A0A7L4NQ84_9AVES (Esterase OVCA2 (Fragment) n=1 Tax=Ceyx cyanopectus TaxID=390723 RepID=A0A7L4NQ84_9AVES)

HSP 1 Score: 70.1 bits (170), Expect = 1.350e-12
Identity = 40/119 (33.61%), Postives = 61/119 (51.26%), Query Frame = 1
Query:   22 LQTALDTIRAALRDHGPFCSVVGFSQGAALAALLLTNRVAEYLDWSPSHVVLLCGFLTRLPAHDSCFASGLRPGATAVTATGKADRITPPELARALGDVLVDSGVRVQHYVHSGGHLPP 378
            L+ +L  + AAL++HGPF  ++GFSQGAALAA++   R      +  +  +L+ GF +R PAH   +   +  G   +   G+ D +    L+R L    V+  V      H GGH  P
Sbjct:    7 LEESLSAVAAALKEHGPFDGLLGFSQGAALAAMVCALRARGDPRFPVAFAILVAGFASRAPAHGHFYREPI--GLPTLHVVGETDAVIAASLSRELAQRFVEPVV----LTHPGGHFVP 119          
BLAST of mRNA_M-pyrifera_M_contig117418.3595.1 vs. uniprot
Match: A0A8C3EXQ8_CHRPI (Esterase OVCA2 n=3 Tax=Emydidae TaxID=8476 RepID=A0A8C3EXQ8_CHRPI)

HSP 1 Score: 70.5 bits (171), Expect = 4.570e-12
Identity = 42/119 (35.29%), Postives = 59/119 (49.58%), Query Frame = 1
Query:   22 LQTALDTIRAALRDHGPFCSVVGFSQGAALAALLLTNRVAEYLDWSPSHVVLLCGFLTRLPAHDSCFASGLRPGATAVTATGKADRITPPELARALGDVLVDSGVRVQHYVHSGGHLPP 378
            L  +LDT+  AL +HGPF  ++GFSQGAALAAL+   +      +     +L+ GF +R   H S +   +     ++   G  DR+ PP L+R L    V   V      H GGH  P
Sbjct:   94 LDESLDTVARALAEHGPFDGLLGFSQGAALAALVCALQQRGDARFPFEFAILVAGFKSRAAPHSSYYREPI--AVPSLHVLGDTDRVIPPGLSRELASHFVGPAV----LTHPGGHFVP 206          
BLAST of mRNA_M-pyrifera_M_contig117418.3595.1 vs. uniprot
Match: A0A7L0MW57_9PASS (Esterase OVCA2 (Fragment) n=1 Tax=Formicarius rufipectus TaxID=1118560 RepID=A0A7L0MW57_9PASS)

HSP 1 Score: 69.3 bits (168), Expect = 8.540e-12
Identity = 42/135 (31.11%), Postives = 64/135 (47.41%), Query Frame = 1
Query:   16 IELQTALDTIRAALRDHGPFCSVVGFSQGAALAALLLTNRVAEYLDWSPSHVVLLCGFLTRLPAHDSCFASGLRPGATAVTATGKADRITPPELARALGDVLVDSGVRVQHYVHSGGHLPPTPTADILAFDRIMQ 420
            + L+ AL  + AAL +HGPF  ++GFSQGAALAA++   R      +  +  VL+ GF +R PAH   +   +      +   G  D +    L+R L    V+  +      H GGH  P   A   A+   ++
Sbjct:   64 VGLEEALSVVAAALAEHGPFDGLLGFSQGAALAAMVCALRARGDSRFPVAFAVLVAGFASRAPAHGHFYRDPI--ALPTLHVVGDTDAVIAAPLSRELAQCFVEPVL----LAHPGGHFIPAAAAQKKAYLEFLE 192          
BLAST of mRNA_M-pyrifera_M_contig117418.3595.1 vs. uniprot
Match: A0A851T6D5_9AVES (Esterase OVCA2 (Fragment) n=5 Tax=Tinamidae TaxID=8803 RepID=A0A851T6D5_9AVES)

HSP 1 Score: 68.9 bits (167), Expect = 1.660e-11
Identity = 42/119 (35.29%), Postives = 60/119 (50.42%), Query Frame = 1
Query:   22 LQTALDTIRAALRDHGPFCSVVGFSQGAALAALLLTNRVAEYLDWSPSHVVLLCGFLTRLPAHDSCFASGLRPGATAVTATGKADRITPPELARALGDVLVDSGVRVQHYVHSGGHLPP 378
            L  +L  + AAL +HGPF  ++GFSQGAALAA++   R A    +  +  VL+ GF +R PAH   +   +      +   G+AD +  P L+  L    V+  V      H GGH  P
Sbjct:   87 LDESLSAVAAALAEHGPFDGLLGFSQGAALAAMVCALRAAGDSRFPVAFAVLVAGFASRAPAHAGFYRQPI--ALPTLHVVGQADAVIAPHLSWELARSFVEPVV----LEHPGGHFVP 199          
BLAST of mRNA_M-pyrifera_M_contig117418.3595.1 vs. uniprot
Match: A0A3M0KC70_HIRRU (2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 n=1 Tax=Hirundo rustica rustica TaxID=333673 RepID=A0A3M0KC70_HIRRU)

HSP 1 Score: 70.5 bits (171), Expect = 1.890e-11
Identity = 43/133 (32.33%), Postives = 64/133 (48.12%), Query Frame = 1
Query:   22 LQTALDTIRAALRDHGPFCSVVGFSQGAALAALLLTNRVAEYLDWSPSHVVLLCGFLTRLPAHDSCFASGLRPGATAVTATGKADRITPPELARALGDVLVDSGVRVQHYVHSGGHLPPTPTADILAFDRIMQ 420
            L+ +L T+ AAL +HGPF  ++GFSQGAALAA++   R      +  +  VL+ GF +R PAH   +   +      +   G  D +    L+R L    V+  V      H GGH  P   A   A+   ++
Sbjct:  394 LEESLSTVAAALAEHGPFDGLLGFSQGAALAAMVCALRARGDPRFPVAFAVLVAGFASRAPAHGHFYREPI--ALPTLHVVGDTDAVIAAPLSRELAQCFVEPVV----LTHPGGHFIPAAAAQKKAYLEFLE 520          
BLAST of mRNA_M-pyrifera_M_contig117418.3595.1 vs. uniprot
Match: A0A7L2SR95_9PASS (Esterase OVCA2 (Fragment) n=1 Tax=Mystacornis crossleyi TaxID=98133 RepID=A0A7L2SR95_9PASS)

HSP 1 Score: 67.4 bits (163), Expect = 2.080e-11
Identity = 42/133 (31.58%), Postives = 63/133 (47.37%), Query Frame = 1
Query:   22 LQTALDTIRAALRDHGPFCSVVGFSQGAALAALLLTNRVAEYLDWSPSHVVLLCGFLTRLPAHDSCFASGLRPGATAVTATGKADRITPPELARALGDVLVDSGVRVQHYVHSGGHLPPTPTADILAFDRIMQ 420
            L+ +L  + AAL +HGPF  ++GFSQGAALAA++   R      +  +  VL+ GF +R PAH   +   +      +   G  D +    L+R L    V+  V      H GGH  P   A   A+   ++
Sbjct:   23 LEESLSAVAAALAEHGPFDGLLGFSQGAALAAMVCALRARGDPRFPVAFAVLVAGFASRAPAHGHFYREPI--ALPTLHIVGDTDAVIAAPLSRELARCFVEPVV----LTHPGGHFIPAAAAQKKAYLEFLE 149          
BLAST of mRNA_M-pyrifera_M_contig117418.3595.1 vs. uniprot
Match: A0A7L3INS7_9PASS (Esterase OVCA2 (Fragment) n=1 Tax=Pardalotus punctatus TaxID=254575 RepID=A0A7L3INS7_9PASS)

HSP 1 Score: 68.2 bits (165), Expect = 3.180e-11
Identity = 41/133 (30.83%), Postives = 63/133 (47.37%), Query Frame = 1
Query:   22 LQTALDTIRAALRDHGPFCSVVGFSQGAALAALLLTNRVAEYLDWSPSHVVLLCGFLTRLPAHDSCFASGLRPGATAVTATGKADRITPPELARALGDVLVDSGVRVQHYVHSGGHLPPTPTADILAFDRIMQ 420
            L+ +L  + AAL +HGPF  ++GFSQGAALAA++   R      +  +  VL+ GF +R PAH   +   +      +   G  D +    L+R L    V+  +      H GGH  P   A   A+   ++
Sbjct:   86 LEESLSAVAAALAEHGPFDGLLGFSQGAALAAMVCALRARGDPRFPVAFAVLVAGFASRAPAHGHFYREPI--ALPTLHVVGDTDAVIAAPLSRELAQCFVEPVI----LTHPGGHFIPAAAAQKKAYLEFLE 212          
BLAST of mRNA_M-pyrifera_M_contig117418.3595.1 vs. uniprot
Match: A0A7L1X7Y2_9AVES (Esterase OVCA2 (Fragment) n=1 Tax=Thinocorus orbignyianus TaxID=161742 RepID=A0A7L1X7Y2_9AVES)

HSP 1 Score: 67.4 bits (163), Expect = 5.590e-11
Identity = 39/119 (32.77%), Postives = 60/119 (50.42%), Query Frame = 1
Query:   22 LQTALDTIRAALRDHGPFCSVVGFSQGAALAALLLTNRVAEYLDWSPSHVVLLCGFLTRLPAHDSCFASGLRPGATAVTATGKADRITPPELARALGDVLVDSGVRVQHYVHSGGHLPP 378
            L+ +L  + AA+ +HGPF  ++GFSQGAALAA++   R      +  +  +L+ GF +R PAH   +   +      +   G AD +    L+R L    V+  V      H+GGH  P
Sbjct:   79 LEESLSAVEAAMAEHGPFDGLLGFSQGAALAAMVCALRARGDPRFPVAFAILVAGFASRAPAHAHFYRDPI--SLPTLHVVGDADAVIAAPLSRELAQHFVEPTV----LTHTGGHFVP 191          
BLAST of mRNA_M-pyrifera_M_contig117418.3595.1 vs. uniprot
Match: A0A7K9BX85_9PICI (Esterase OVCA2 (Fragment) n=65 Tax=Neognathae TaxID=8825 RepID=A0A7K9BX85_9PICI)

HSP 1 Score: 67.4 bits (163), Expect = 6.440e-11
Identity = 40/119 (33.61%), Postives = 60/119 (50.42%), Query Frame = 1
Query:   22 LQTALDTIRAALRDHGPFCSVVGFSQGAALAALLLTNRVAEYLDWSPSHVVLLCGFLTRLPAHDSCFASGLRPGATAVTATGKADRITPPELARALGDVLVDSGVRVQHYVHSGGHLPP 378
            L+ +L  + AAL++HGPF  ++GFSQGAALAA++   R      +  +  +L+ GF +R PAH   +   +      +   G AD +    L+R L    V+  V      H GGH  P
Sbjct:   90 LEESLSAVAAALKEHGPFDGLLGFSQGAALAAMVCALRARGDPRFPVAFAILVAGFASRAPAHRHFYREPI--ALPTLHVVGDADAVIAASLSRELAQHFVEPVV----LSHPGGHFVP 202          
BLAST of mRNA_M-pyrifera_M_contig117418.3595.1 vs. uniprot
Match: UPI0013631806 (esterase OVCA2 n=2 Tax=Corvus TaxID=30420 RepID=UPI0013631806)

HSP 1 Score: 68.2 bits (165), Expect = 8.580e-11
Identity = 42/133 (31.58%), Postives = 63/133 (47.37%), Query Frame = 1
Query:   22 LQTALDTIRAALRDHGPFCSVVGFSQGAALAALLLTNRVAEYLDWSPSHVVLLCGFLTRLPAHDSCFASGLRPGATAVTATGKADRITPPELARALGDVLVDSGVRVQHYVHSGGHLPPTPTADILAFDRIMQ 420
            L+ +L  + AAL +HGPF  ++GFSQGAALAA++   R      +  +  VL+ GF +R PAH   +   +      +   G  D +    L+R L    V+  V      H GGH  P   A   A+   ++
Sbjct:  182 LEESLSAVAAALAEHGPFDGLLGFSQGAALAAMVCALRARGDPRFPVAFAVLVAGFASRAPAHGHFYREPI--ALPTLHIVGDTDAVIAAPLSRELAQCFVEPVV----LTHPGGHFIPAAAAQKKAYLEFLE 308          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117418.3595.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7L4NQ84_9AVES1.350e-1233.61Esterase OVCA2 (Fragment) n=1 Tax=Ceyx cyanopectus... [more]
A0A8C3EXQ8_CHRPI4.570e-1235.29Esterase OVCA2 n=3 Tax=Emydidae TaxID=8476 RepID=A... [more]
A0A7L0MW57_9PASS8.540e-1231.11Esterase OVCA2 (Fragment) n=1 Tax=Formicarius rufi... [more]
A0A851T6D5_9AVES1.660e-1135.29Esterase OVCA2 (Fragment) n=5 Tax=Tinamidae TaxID=... [more]
A0A3M0KC70_HIRRU1.890e-1132.332-(3-amino-3-carboxypropyl)histidine synthase subu... [more]
A0A7L2SR95_9PASS2.080e-1131.58Esterase OVCA2 (Fragment) n=1 Tax=Mystacornis cros... [more]
A0A7L3INS7_9PASS3.180e-1130.83Esterase OVCA2 (Fragment) n=1 Tax=Pardalotus punct... [more]
A0A7L1X7Y2_9AVES5.590e-1132.77Esterase OVCA2 (Fragment) n=1 Tax=Thinocorus orbig... [more]
A0A7K9BX85_9PICI6.440e-1133.61Esterase OVCA2 (Fragment) n=65 Tax=Neognathae TaxI... [more]
UPI00136318068.580e-1131.58esterase OVCA2 n=2 Tax=Corvus TaxID=30420 RepID=UP... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig117418contigM-pyrifera_M_contig117418:133..552 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score73.2
Seed ortholog evalue1.1e-10
Seed eggNOG ortholog157072.XP_008872378.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.polyketide biosynthetic process
EggNOG OGsKOG2551@1,KOG2551@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size420
Cds size420
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815691.8334723-CDS-M-pyrifera_M_contig117418:132..5521622815691.8334723-CDS-M-pyrifera_M_contig117418:132..552Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig117418 133..552 -
1692277524.116272-CDS-M-pyrifera_M_contig117418:132..5521692277524.116272-CDS-M-pyrifera_M_contig117418:132..552Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig117418 133..552 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig117418.3595.1prot_M-pyrifera_M_contig117418.3595.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig117418 133..552 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig117418.3595.1

>prot_M-pyrifera_M_contig117418.3595.1 ID=prot_M-pyrifera_M_contig117418.3595.1|Name=mRNA_M-pyrifera_M_contig117418.3595.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=140bp
PVTDDIELQTALDTIRAALRDHGPFCSVVGFSQGAALAALLLTNRVAEYL
DWSPSHVVLLCGFLTRLPAHDSCFASGLRPGATAVTATGKADRITPPELA
RALGDVLVDSGVRVQHYVHSGGHLPPTPTADILAFDRIMQ
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mRNA from alignment at M-pyrifera_M_contig117418:133..552-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig117418.3595.1 ID=mRNA_M-pyrifera_M_contig117418.3595.1|Name=mRNA_M-pyrifera_M_contig117418.3595.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=420bp|location=Sequence derived from alignment at M-pyrifera_M_contig117418:133..552- (Macrocystis pyrifera P11B4 male)
CCCGTCACTGATGACATCGAGCTGCAAACTGCTCTGGATACCATCCGGGC CGCCCTACGGGACCATGGACCTTTCTGTAGTGTTGTTGGATTCTCCCAAG GCGCTGCGCTTGCCGCCCTCCTCCTCACCAATCGCGTCGCCGAGTACCTC GACTGGTCCCCTTCACACGTCGTCCTGCTCTGCGGCTTCCTCACCCGCCT GCCTGCACACGACAGCTGTTTTGCTTCCGGCCTCCGCCCGGGTGCTACAG CTGTCACGGCCACCGGCAAGGCAGACCGTATCACCCCTCCAGAGCTTGCA CGCGCTCTTGGTGATGTGCTCGTCGACTCTGGCGTTCGCGTGCAACACTA TGTACACAGTGGAGGCCACCTGCCGCCGACTCCTACTGCAGACATCCTCG CCTTTGACCGGATCATGCAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig117418:133..552-

>mRNA_M-pyrifera_M_contig117418.3595.1 ID=mRNA_M-pyrifera_M_contig117418.3595.1|Name=mRNA_M-pyrifera_M_contig117418.3595.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=840bp|location=Sequence derived from alignment at M-pyrifera_M_contig117418:133..552- (Macrocystis pyrifera P11B4 male)
CCCGTCACTGATGACATCGAGCTGCAAACTGCTCTGGATACCATCCGGGC
CGCCCTACGGGACCATGGACCTTTCTGTAGTGTTGTTGGATTCTCCCAAG
GCGCTGCGCTTGCCGCCCTCCTCCTCACCAATCGCGTCGCCGAGTACCTC
GACTGGTCCCCTTCACACGTCGTCCTGCTCTGCGGCTTCCTCACCCGCCT
GCCTGCACACGACAGCTGTTTTGCTTCCGGCCTCCGCCCGGGTGCTACAG
CTGTCACGGCCACCGGCAAGGCAGACCGTATCACCCCTCCAGAGCTTGCA
CGCGCTCTTGGTGATGTGCTCGTCGACTCTGGCGTTCGCGTGCAACACTA
TGTACACAGTGGAGGCCACCTGCCGCCGACTCCTACTGCAGACATCCTCG
CCTTTGACCGGATCATGCAACCCGTCACTGATGACATCGAGCTGCAAACT
GCTCTGGATACCATCCGGGCCGCCCTACGGGACCATGGACCTTTCTGTAG
TGTTGTTGGATTCTCCCAAGGCGCTGCGCTTGCCGCCCTCCTCCTCACCA
ATCGCGTCGCCGAGTACCTCGACTGGTCCCCTTCACACGTCGTCCTGCTC
TGCGGCTTCCTCACCCGCCTGCCTGCACACGACAGCTGTTTTGCTTCCGG
CCTCCGCCCGGGTGCTACAGCTGTCACGGCCACCGGCAAGGCAGACCGTA
TCACCCCTCCAGAGCTTGCACGCGCTCTTGGTGATGTGCTCGTCGACTCT
GGCGTTCGCGTGCAACACTATGTACACAGTGGAGGCCACCTGCCGCCGAC
TCCTACTGCAGACATCCTCGCCTTTGACCGGATCATGCAA
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