mRNA_M-pyrifera_M_contig117069.3523.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig117069.3523.1 vs. uniprot
Match: A0A6A5BPR9_NAEFO (USP domain-containing protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5BPR9_NAEFO) HSP 1 Score: 129 bits (325), Expect = 1.340e-31 Identity = 71/179 (39.66%), Postives = 116/179 (64.80%), Query Frame = 1
Query: 1 ALRGYSLVSLPPILTLQLKRFDYNFETWTRIKLNHRMSFPMALKMNRWAQLEPGSEEYQLHSVLVHKGGAMGGHYYAFIRS-AEEKWLRFDDDRVSEATEENVVESFGSGDGTGT---AFSGTAYMLVYRRKDLQSDGHKIE--LVSALLKQEIEQKNVEFLKEKKEFDIRKDTINLQI 519
A++G L +LP ILTL LKRFDY+ +TWTRIKL + ++FP L M ++ + GS Y L +VL+H G A+GGHYYA+I+S + KW F+D VSE + V +G+ D + T + S AYML+YR++D + + +E ++ L++E+E+ N + ++E ++ + + ++NL+I
Sbjct: 298 AIKGLKLKTLPYILTLHLKRFDYDLQTWTRIKLGNMVTFPFELDMTKYVTNQSGSYIYDLFAVLIHSGSALGGHYYAYIKSFSTGKWYNFNDSNVSEIDAQQVKLMYGTNDASATGRYSSSTNAYMLLYRKRDEILNINHVEENMIPDDLREEVEKDNEQIVEELRKAEEARQSLNLRI 476
BLAST of mRNA_M-pyrifera_M_contig117069.3523.1 vs. uniprot
Match: A0A6B2KXQ2_9EUKA (Ubiquitin carboxyl-terminal hydrolase 47 n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KXQ2_9EUKA) HSP 1 Score: 120 bits (300), Expect = 2.960e-28 Identity = 72/183 (39.34%), Postives = 107/183 (58.47%), Query Frame = 1
Query: 7 RGYSLVSLPPILTLQLKRFDYNFETWTRIKLNHRMSFPMALKMNRWAQLEP--GSEEYQLHSVLVHKGGAMGGHYYAFIRSAE-EKWLRFDDDRVSEATEENVVESFGSG--DGTGTA-------FSGTAYMLVYRRKDLQSDGHKIELVSALLKQEIEQKNVEFLKEKKEFDIRKDTINLQI 519
+G L S P LTLQLKRFDY+++TW RIKLN+R++FP+ + W + S +YQL SVL+H+GGA GGHYYA I +KW +F+D V+E +++ +G D TG +S AY+L YRR+ + + +K+ IE++N +F K K+EF R+D + L +
Sbjct: 168 KGLRLKSTPLFLTLQLKRFDYDYQTWQRIKLNNRVTFPLEFDVKPWLSQDSDANSTKYQLFSVLIHQGGAQGGHYYAIISDVHSKKWYKFNDSSVTEIEAKDIELMYGEQPKDETGPKKIVQGKLYSSNAYLLFYRREGDPIPPERS--IPEYIKKYIEEENEKFTKAKEEFIQRRDNLPLDL 348
BLAST of mRNA_M-pyrifera_M_contig117069.3523.1 vs. uniprot
Match: D2V7T5_NAEGR (Peptidase C19 family ubiquitinyl hydrolase n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2V7T5_NAEGR) HSP 1 Score: 119 bits (299), Expect = 4.160e-28 Identity = 66/179 (36.87%), Postives = 109/179 (60.89%), Query Frame = 1
Query: 1 ALRGYSLVSLPPILTLQLKRFDYNFETWTRIKLNHRMSFPMALKMNRWAQLEPGSEEYQLHSVLVHKGGAMGGHYYAFIRS-AEEKWLRFDDDRVSEATEENVVESFGSGDGTGT---AFSGTAYMLVYRRKD--LQSDGHKIELVSALLKQEIEQKNVEFLKEKKEFDIRKDTINLQI 519
A++G ++P I TL LKRFDY++ TW RIKL + ++FP L ++++ + + Y+L VLVH G + GGHYYA+I+S + +KW F+D VSE E V FG+ D + T A S AYML+YR++D L + + ++ LK+E+E+ N + +E ++ + + I +++
Sbjct: 291 AVKGLKFKTIPYIFTLHLKRFDYDYTTWNRIKLGNMVTFPFELDVSKYLEDNTQNAIYELFGVLVHSGTSSGGHYYAYIKSFSSDKWYNFNDSNVSEIDREQVKVMFGNNDSSSTGRFASSTNAYMLLYRKRDEKLNINSVDMSIIPEDLKEEVEKDNEQIEEEVRKSEELRSNITIRV 469
BLAST of mRNA_M-pyrifera_M_contig117069.3523.1 vs. uniprot
Match: A0A1V9Y287_9ACAR (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Tropilaelaps mercedesae TaxID=418985 RepID=A0A1V9Y287_9ACAR) HSP 1 Score: 117 bits (292), Expect = 3.530e-27 Identity = 75/186 (40.32%), Postives = 110/186 (59.14%), Query Frame = 1
Query: 1 ALRGYSLVSLPPILTLQLKRFDYNFETWTRIKLNHRMSFPMALKMNRWAQLEPGSEEY--QLHSVLVHKGGAMGGHYYAFIRSAEEKWLRFDDDRVSEATEENVVESFGSGDGTGT----AFSGTAYMLVYRRK---------DLQSDGHKIELVSALLKQEIEQKNVEFLKEKKEFDIRKDTINL 513
AL+G V+ P ILTLQLKRFD+++ T RIKLN R+ FP L +N + + +P EY L +VLVH G A GGHYYA+IR + + W F+D++V + + E+V ++G G T T + S AYML+YR+K D + H ++L +L +++ EFLK+K E D + T+ L
Sbjct: 196 ALKGLKFVTFPKILTLQLKRFDFDYLTMRRIKLNDRVVFPEELDLNGFIESKPPKSEYVYDLFAVLVHSGSANGGHYYAYIRHSGD-WFCFNDNQVHKVSSEDVKRTYGGGGSTETRSPFSSSTNAYMLIYRQKSEAGALALTDAEFAEHLLKLRQSLNEED------EFLKDKAEKDSKLITVKL 374
BLAST of mRNA_M-pyrifera_M_contig117069.3523.1 vs. uniprot
Match: UPI00026585D9 (ubiquitin carboxyl-terminal hydrolase 47 n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI00026585D9) HSP 1 Score: 115 bits (288), Expect = 1.220e-26 Identity = 63/134 (47.01%), Postives = 86/134 (64.18%), Query Frame = 1
Query: 1 ALRGYSLVSLPPILTLQLKRFDYNFETWTRIKLNHRMSFPMALKMNRWAQLEPGSEEY--QLHSVLVHKGGAMGGHYYAFIRSAEEKWLRFDDDRVSEATEENVVESFGSGDGTGT----AFSGTAYMLVYRRK 384
AL+G VS P ILTLQLKRFD+++ T RIKLN R+ FP L +N + + +P EY L +VL+H G A GGHYYA+IR+ + W F+D++V T E+V +FG G T T + S AYML+YR++
Sbjct: 195 ALKGLKFVSFPKILTLQLKRFDFDYLTMRRIKLNDRVEFPEVLDLNGFIESKPPKTEYVYDLFAVLIHSGSANGGHYYAYIRNKTD-WFCFNDNQVHRVTLEDVQRTFGGGGSTDTRSPFSSSTNAYMLIYRQQ 327
BLAST of mRNA_M-pyrifera_M_contig117069.3523.1 vs. uniprot
Match: A0A7S1KS34_9EUKA (Hypothetical protein n=1 Tax=Percolomonas cosmopolitus TaxID=63605 RepID=A0A7S1KS34_9EUKA) HSP 1 Score: 111 bits (277), Expect = 3.780e-25 Identity = 61/178 (34.27%), Postives = 101/178 (56.74%), Query Frame = 1
Query: 1 ALRGYSLVSLPPILTLQLKRFDYNFETWTRIKLNHRMSFPMALKMNRWAQLEPGSE-EYQLHSVLVHKGGAMGGHYYAFIRS-AEEKWLRFDDDRVSEATEENVVESFGSGDGTGTAFSGTAYMLVYRRKDLQSDGHKI---ELVSALLKQEIEQKNVEFLKEKKEFDIRKDTINLQI 519
A +G+ + P ILTL LKRFDY+ TW +KL+HR+ FP L + + E Y+L S L+H G GHYYA+I++ A KW F+D V E + E+V + +G + + S AYML+YRR D D + + E + L+Q + N ++ ++++ ++R++T+ ++
Sbjct: 302 ATKGFRFENFPSILTLHLKRFDYDRRTWQPVKLSHRIEFPFELDLKGYVPENYSQETRYELFSCLIHSGSVRSGHYYAYIKNMANNKWYEFNDSNVREISIEDVQKMYGRDEDISSYSSTNAYMLMYRRVDSMRDNNTVFHSEFIPEDLQQWVSDLNEKWEEDRQREELRRNTLTFRV 479
BLAST of mRNA_M-pyrifera_M_contig117069.3523.1 vs. uniprot
Match: A0A7M7JGW3_VARDE (USP domain-containing protein n=2 Tax=Varroa TaxID=62624 RepID=A0A7M7JGW3_VARDE) HSP 1 Score: 110 bits (276), Expect = 5.170e-25 Identity = 61/134 (45.52%), Postives = 85/134 (63.43%), Query Frame = 1
Query: 1 ALRGYSLVSLPPILTLQLKRFDYNFETWTRIKLNHRMSFPMALKMNRWAQLEPGSEEY--QLHSVLVHKGGAMGGHYYAFIRSAEEKWLRFDDDRVSEATEENVVESFGSGDGTGT----AFSGTAYMLVYRRK 384
AL+G ++ P ILTLQLKRFD+++ T RIKLN R+ FP L +N + + +P EY L +VLVH G A GGHYYA+IR + W F+D++V + E+V ++G G T T + S AYML+YR+K
Sbjct: 196 ALKGLKFLTFPKILTLQLKRFDFDYLTMRRIKLNDRVEFPEELDLNAFIESKPPKSEYVYNLFAVLVHSGSANGGHYYAYIRHKSD-WFCFNDNQVHKVGSEDVWRTYGGGGYTETRSPFSSSTNAYMLIYRQK 328
BLAST of mRNA_M-pyrifera_M_contig117069.3523.1 vs. uniprot
Match: A0A670HS80_PODMU (Ubiquitin carboxyl-terminal hydrolase 47 n=7 Tax=Episquamata TaxID=1329912 RepID=A0A670HS80_PODMU) HSP 1 Score: 110 bits (274), Expect = 9.590e-25 Identity = 62/147 (42.18%), Postives = 92/147 (62.59%), Query Frame = 1
Query: 1 ALRGYSLVSLPPILTLQLKRFDYNFETWTRIKLNHRMSFPMALKMNRWAQLEP-GSEEYQLHSVLVHKGGAMGGHYYAFIRS-AEEKWLRFDDDRVSEATEENVVESFGSGDGT----GTAFSGT--AYMLVYRRKDLQSDGHKIEL 417
A +G + P +LTLQLKRFD+++ T RIKLN RM+FP L M + +E S Y+L SV+VH G A GGHYYA I+S +++W F+D VS+ T E++ +++G G+ +AF+ + AYML+YR KD + +E+
Sbjct: 373 ARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMGSFIDIEDENSLLYELFSVMVHSGSAAGGHYYACIKSFTDDQWYSFNDQHVSKITHEDIKKTYGGTSGSRGYYSSAFASSTNAYMLIYRLKDTTRNAKFLEV 519
BLAST of mRNA_M-pyrifera_M_contig117069.3523.1 vs. uniprot
Match: UPI001CDB781B (ubiquitin carboxyl-terminal hydrolase 47 isoform X2 n=1 Tax=Gambusia affinis TaxID=33528 RepID=UPI001CDB781B) HSP 1 Score: 108 bits (270), Expect = 3.300e-24 Identity = 59/137 (43.07%), Postives = 91/137 (66.42%), Query Frame = 1
Query: 1 ALRGYSLVSLPPILTLQLKRFDYNFETWTRIKLNHRMSFPMALKMNRWAQLEPGSE-EYQLHSVLVHKGGAMGGHYYAFIRS-AEEKWLRFDDDRVSEATEENVVESFGSGDGT----GTAFSGT--AYMLVYRRKD 387
A +G + P +LTLQLKRFD+++ T RIKLN RM+FP L M+ + +E S ++L SV+VH G A GGHYYA+I+S ++ +W F+D VS+ T++++ +++G G+ +AF+ + AYML+YR KD
Sbjct: 357 ARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSPFIDVEDESLLTFELFSVMVHSGSAAGGHYYAYIKSFSDGQWYSFNDQHVSKITQDDIRKTYGGSSGSRGYYSSAFASSTNAYMLIYRLKD 493
BLAST of mRNA_M-pyrifera_M_contig117069.3523.1 vs. uniprot
Match: A0A2K3DKA3_CHLRE (Ubiquitinyl hydrolase 1 n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DKA3_CHLRE) HSP 1 Score: 108 bits (269), Expect = 4.500e-24 Identity = 65/149 (43.62%), Postives = 87/149 (58.39%), Query Frame = 1
Query: 1 ALRGYSLVSLPPILTLQLKRFDYNFETWTRIKLNHRMSFPMALKMNRWA----------QLEPGS-----EEYQLHSVLVHKGGAMGGHYYAFIRSAEEKWLRFDDDRVSEATEENVVES-FGSGDGTGT------AFSGTAYMLVYRR 381
A +G S PP+L LQLKRF+Y+F+ + +K+N R F L ++R A QL GS Y+LHSVLVH GG GGHYYA+IR ++WL+FDDDRV++A + +E +G+GD +G A AYMLVY R
Sbjct: 364 ARKGILFESFPPVLQLQLKRFEYDFQRDSMVKINDRYEFYDELDLDREAGKFLSPTGAQQLSTGSLSAPRNTYKLHSVLVHSGGVHGGHYYAYIRPDGQQWLKFDDDRVTKAEPHDALEGQYGTGDDSGYGSNLKFAKCSNAYMLVYVR 512 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117069.3523.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig117069.3523.1 >prot_M-pyrifera_M_contig117069.3523.1 ID=prot_M-pyrifera_M_contig117069.3523.1|Name=mRNA_M-pyrifera_M_contig117069.3523.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=174bp ALRGYSLVSLPPILTLQLKRFDYNFETWTRIKLNHRMSFPMALKMNRWAQback to top mRNA from alignment at M-pyrifera_M_contig117069:32..553- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig117069.3523.1 ID=mRNA_M-pyrifera_M_contig117069.3523.1|Name=mRNA_M-pyrifera_M_contig117069.3523.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=522bp|location=Sequence derived from alignment at M-pyrifera_M_contig117069:32..553- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig117069:32..553- >mRNA_M-pyrifera_M_contig117069.3523.1 ID=mRNA_M-pyrifera_M_contig117069.3523.1|Name=mRNA_M-pyrifera_M_contig117069.3523.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1044bp|location=Sequence derived from alignment at M-pyrifera_M_contig117069:32..553- (Macrocystis pyrifera P11B4 male)back to top |