mRNA_M-pyrifera_M_contig117061.3521.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig117061.3521.1 vs. uniprot
Match: A0A6I3F8J5_9ACTN (UPF0182 protein F2585_06265 n=2 Tax=root TaxID=1 RepID=A0A6I3F8J5_9ACTN) HSP 1 Score: 195 bits (496), Expect = 8.670e-55 Identity = 90/166 (54.22%), Postives = 116/166 (69.88%), Query Frame = 1
Query: 1 TGDSEVIFNRDIVSRARTVAPFLEFDSDPYPIVADGRIQWIVDAYTTTNRFPYAQANRVSSLSASSDLSSRQINYVRNSVKVVVDAYDGDVKLYITDPDDPLVAAYAKAFPDLLTSVDEAPTSISDHFRYAPDMFSVQSEMLATYHVTDPVQFLQGNNSWEVANEP 498
T DS ++F RD+ R TVAPFL FD+DPYP+++ GR+ +I DAYTTT+R+P AQ S L S L + NY+RNSVK VVD YDG VKLYI +PDDP++AAYAKAFP L ++VDE T + DH+RY DMF VQ+ M YH+ +P F + +SW VA +P
Sbjct: 550 TSDSRIVFQRDVRQRVETVAPFLHFDADPYPVISGGRVVYIFDAYTTTDRYPNAQRADASGLPGGSGLQGERFNYIRNSVKGVVDTYDGTVKLYIVNPDDPIIAAYAKAFPALFSNVDEMSTDLKDHWRYPEDMFRVQTNMFGRYHIGEPAAFYEKTSSWSVAQDP 715
BLAST of mRNA_M-pyrifera_M_contig117061.3521.1 vs. uniprot
Match: A0A7K1EA13_9ACTN (Uncharacterized protein n=3 Tax=root TaxID=1 RepID=A0A7K1EA13_9ACTN) HSP 1 Score: 188 bits (477), Expect = 4.660e-54 Identity = 88/166 (53.01%), Postives = 112/166 (67.47%), Query Frame = 1
Query: 1 TGDSEVIFNRDIVSRARTVAPFLEFDSDPYPIVADGRIQWIVDAYTTTNRFPYAQANRVSSLSASSDLSSRQINYVRNSVKVVVDAYDGDVKLYITDPDDPLVAAYAKAFPDLLTSVDEAPTSISDHFRYAPDMFSVQSEMLATYHVTDPVQFLQGNNSWEVANEP 498
T DS +++ RDI R VAPF++FDSDPYP++ DGR+ +I D YTTT+R+P AQ S L A SDL + NYVRNSVK VVD YDG VKLYI DP DP+V AY +AFP L VDE P + H+RY D+F VQ+ M YH++D F + ++SW VA +P
Sbjct: 74 TSDSRIVYQRDIRQRVEAVAPFMQFDSDPYPVIQDGRVVYIFDGYTTTDRYPNAQRADSSGLPAGSDLGGNRFNYVRNSVKGVVDTYDGTVKLYIVDPSDPIVNAYQQAFPALFAGVDEMPAELKAHWRYPEDLFRVQTNMFGRYHISDAKSFYEKSSSWSVAQDP 239
BLAST of mRNA_M-pyrifera_M_contig117061.3521.1 vs. uniprot
Match: UPI001AA04CA2 (UPF0182 family protein n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001AA04CA2) HSP 1 Score: 191 bits (485), Expect = 2.720e-53 Identity = 89/166 (53.61%), Postives = 113/166 (68.07%), Query Frame = 1
Query: 1 TGDSEVIFNRDIVSRARTVAPFLEFDSDPYPIVADGRIQWIVDAYTTTNRFPYAQANRVSSLSASSDLSSRQINYVRNSVKVVVDAYDGDVKLYITDPDDPLVAAYAKAFPDLLTSVDEAPTSISDHFRYAPDMFSVQSEMLATYHVTDPVQFLQGNNSWEVANEP 498
T DS +++ RD+ R + VAPFL+FD+DPYP+V G I +++DAYTTT+R+P AQ S LS S L + NYVRNSVK VVDAYDG VKLY+ DP DP++ AY KAFPDL VD P+ + DH+RY D+F VQ+ M YH+TDP F N W VA +P
Sbjct: 555 TSDSRILYLRDVRERVQEVAPFLQFDADPYPVVIGGHIVYLIDAYTTTDRYPNAQRADASGLSRGSGLEGHRFNYVRNSVKAVVDAYDGTVKLYVVDPQDPIIKAYDKAFPDLFEPVDAMPSELRDHWRYPEDLFRVQTNMWGQYHITDPRSFYDKTNGWAVAQDP 720
BLAST of mRNA_M-pyrifera_M_contig117061.3521.1 vs. uniprot
Match: A0A7K1A2G4_9ACTN (UPF0182 protein F2584_00660 n=6 Tax=root TaxID=1 RepID=A0A7K1A2G4_9ACTN) HSP 1 Score: 191 bits (484), Expect = 3.710e-53 Identity = 87/166 (52.41%), Postives = 114/166 (68.67%), Query Frame = 1
Query: 1 TGDSEVIFNRDIVSRARTVAPFLEFDSDPYPIVADGRIQWIVDAYTTTNRFPYAQANRVSSLSASSDLSSRQINYVRNSVKVVVDAYDGDVKLYITDPDDPLVAAYAKAFPDLLTSVDEAPTSISDHFRYAPDMFSVQSEMLATYHVTDPVQFLQGNNSWEVANEP 498
T DS +++ RDI R VAPF++FD+DPYP++ DGR+ +I D YTTT+R+P AQ + L A SDL ++ NY+RNSVK VVD YDG VKLYI DP DP+V AY KAFP L VDE P + H+RY D+F VQ+ M YH++DP F + ++SW VA +P
Sbjct: 549 TSDSRIVYQRDIRQRVEAVAPFMQFDNDPYPVIQDGRVVYIFDGYTTTDRYPNAQRADSTGLPAGSDLGGKRFNYIRNSVKGVVDTYDGTVKLYIVDPSDPIVNAYQKAFPALFAGVDEMPAELKAHWRYPEDLFRVQTNMFGRYHISDPKSFYEKSSSWSVAQDP 714
BLAST of mRNA_M-pyrifera_M_contig117061.3521.1 vs. uniprot
Match: UPI001E35EA06 (UPF0182 family protein n=1 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI001E35EA06) HSP 1 Score: 189 bits (480), Expect = 1.310e-52 Identity = 87/166 (52.41%), Postives = 115/166 (69.28%), Query Frame = 1
Query: 1 TGDSEVIFNRDIVSRARTVAPFLEFDSDPYPIVADGRIQWIVDAYTTTNRFPYAQANRVSSLSASSDLSSRQINYVRNSVKVVVDAYDGDVKLYITDPDDPLVAAYAKAFPDLLTSVDEAPTSISDHFRYAPDMFSVQSEMLATYHVTDPVQFLQGNNSWEVANEP 498
T +S ++F RD+ R RT+APFLEFD DPYP++ DGR+ ++ DA+TTT+R+P +Q V +L A S LS + NYVRNSVK VVD YDG V Y+ DPDDPL AAY +AFPDL DE P + H+RY D++ VQ+ M A YH+TDP +F + +W VA +P
Sbjct: 554 TEESRIVFQRDVAERVRTLAPFLEFDGDPYPVIHDGRVVYLFDAFTTTDRYPNSQRAEVGTLVADSTLSGTRFNYVRNSVKGVVDTYDGSVTFYVIDPDDPLAAAYQQAFPDLFADGDEFPQGLRAHWRYPEDIYKVQTNMWARYHITDPDEFYERTTAWSVAPDP 719
BLAST of mRNA_M-pyrifera_M_contig117061.3521.1 vs. uniprot
Match: A0A6I3CXT7_9ACTN (UPF0182 protein F2617_00340 n=8 Tax=root TaxID=1 RepID=A0A6I3CXT7_9ACTN) HSP 1 Score: 189 bits (480), Expect = 1.310e-52 Identity = 88/166 (53.01%), Postives = 112/166 (67.47%), Query Frame = 1
Query: 1 TGDSEVIFNRDIVSRARTVAPFLEFDSDPYPIVADGRIQWIVDAYTTTNRFPYAQANRVSSLSASSDLSSRQINYVRNSVKVVVDAYDGDVKLYITDPDDPLVAAYAKAFPDLLTSVDEAPTSISDHFRYAPDMFSVQSEMLATYHVTDPVQFLQGNNSWEVANEP 498
T DS +++ RDI R VAPF++FDSDPYP++ DGR+ +I D YTTT+R+P AQ S L A SDL + NYVRNSVK VVD YDG VKLY+ DP DP+V AY KAFP L VDE P + H+RY D+F VQ+ M YH++D F + ++SW VA +P
Sbjct: 549 TSDSRIVYQRDIRQRVEAVAPFMQFDSDPYPVIQDGRVVYIFDGYTTTDRYPNAQRADSSGLPAGSDLGGNRFNYVRNSVKGVVDTYDGTVKLYVVDPSDPIVNAYQKAFPALFAGVDEMPAELKAHWRYPEDLFRVQTNMFGRYHISDAKSFYEKSSSWSVAQDP 714
BLAST of mRNA_M-pyrifera_M_contig117061.3521.1 vs. uniprot
Match: A0A6J6ASV4_9ZZZZ (Unannotated protein n=1 Tax=freshwater metagenome TaxID=449393 RepID=A0A6J6ASV4_9ZZZZ) HSP 1 Score: 187 bits (476), Expect = 1.900e-52 Identity = 87/164 (53.05%), Postives = 111/164 (67.68%), Query Frame = 1
Query: 7 DSEVIFNRDIVSRARTVAPFLEFDSDPYPIVADGRIQWIVDAYTTTNRFPYAQANRVSSLSASSDLSSRQINYVRNSVKVVVDAYDGDVKLYITDPDDPLVAAYAKAFPDLLTSVDEAPTSISDHFRYAPDMFSVQSEMLATYHVTDPVQFLQGNNSWEVANEP 498
DS +++ RDI R VAPF++FDSDPYP++ DGR+ +I D YTTT+R+P AQ S L A SDL ++ NY+RNSVK VVD YDG VKLYI DP DP+V AY KAFP L VDE P + H+RY D+F Q+ M YH++DP F + +SW VA +P
Sbjct: 342 DSRIVYQRDIRQRIEAVAPFMQFDSDPYPVIQDGRVVYIFDGYTTTDRYPNAQRADSSGLPAGSDLGGKRFNYIRNSVKGVVDTYDGTVKLYIVDPSDPIVNAYQKAFPALFAGVDEMPAVLKAHWRYPEDLFRTQTNMFGRYHISDPKAFYEKTSSWSVAQDP 505
BLAST of mRNA_M-pyrifera_M_contig117061.3521.1 vs. uniprot
Match: A0A7V9T182_9ACTN (UPF0182 protein H0U89_08865 n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V9T182_9ACTN) HSP 1 Score: 186 bits (471), Expect = 2.070e-51 Identity = 89/166 (53.61%), Postives = 113/166 (68.07%), Query Frame = 1
Query: 1 TGDSEVIFNRDIVSRARTVAPFLEFDSDPYPIVADGRIQWIVDAYTTTNRFPYAQANRVSSLSASSDLSSRQINYVRNSVKVVVDAYDGDVKLYITDPDDPLVAAYAKAFPDLLTSVDEAPTSISDHFRYAPDMFSVQSEMLATYHVTDPVQFLQGNNSWEVANEP 498
T DS+++F RDI RA TVAPFLEFD+DPY +V DGR+Q+++DAYTT++ +PYAQ S L S L R NY+RNSVKVVVDAYDG LY+ D DDPL AAY AFPDL + P + HFRY D+F VQ+ M YH++DP F G +W++A +P
Sbjct: 543 TDDSKILFQRDIRERAETVAPFLEFDADPYAVVIDGRLQYVLDAYTTSSNYPYAQRADASGLPDESGLQGR-FNYIRNSVKVVVDAYDGTTDLYVVDEDDPLAAAYEDAFPDLFRPKADVPAELEAHFRYPEDLFRVQTNMWGRYHLSDPDDFYTGAGAWDIAQDP 707
BLAST of mRNA_M-pyrifera_M_contig117061.3521.1 vs. uniprot
Match: A0A7W0LTF0_9ACTN (UPF0182 family protein (Fragment) n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0LTF0_9ACTN) HSP 1 Score: 184 bits (467), Expect = 2.890e-51 Identity = 85/165 (51.52%), Postives = 114/165 (69.09%), Query Frame = 1
Query: 4 GDSEVIFNRDIVSRARTVAPFLEFDSDPYPIVADGRIQWIVDAYTTTNRFPYAQANRVSSLSASSDLSSRQINYVRNSVKVVVDAYDGDVKLYITDPDDPLVAAYAKAFPDLLTSVDEAPTSISDHFRYAPDMFSVQSEMLATYHVTDPVQFLQGNNSWEVANEP 498
GDS+++F RD+ R VAPFL FD+DPYP++ DGRI++++DAYTT++R+PYA+ V+ LS S L NYVRNSVK VVDAY+G Y+ D DPL+AAY +AFPDL T DE P + HFRY D+F VQ+ M YH++DP F N++W V+ +P
Sbjct: 543 GDSKILFQRDVRERVEAVAPFLSFDADPYPVIVDGRIKYVLDAYTTSDRYPYAEDANVTGLSGGSGLGGG-FNYVRNSVKAVVDAYEGTTTFYVVDDTDPLIAAYVEAFPDLFTPGDEVPDELRAHFRYPEDLFRVQTNMWGRYHISDPEGFYDQNDAWNVSPDP 706
BLAST of mRNA_M-pyrifera_M_contig117061.3521.1 vs. uniprot
Match: A0A7V8YLK4_9ACTN (UPF0182 protein H0V95_00360 n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V8YLK4_9ACTN) HSP 1 Score: 185 bits (469), Expect = 3.760e-51 Identity = 84/166 (50.60%), Postives = 116/166 (69.88%), Query Frame = 1
Query: 1 TGDSEVIFNRDIVSRARTVAPFLEFDSDPYPIVADGRIQWIVDAYTTTNRFPYAQANRVSSLSASSDLSSRQINYVRNSVKVVVDAYDGDVKLYITDPDDPLVAAYAKAFPDLLTSVDEAPTSISDHFRYAPDMFSVQSEMLATYHVTDPVQFLQGNNSWEVANEP 498
TGD+++++ RDI R +APFL+FD+DPYP+V DG++ W++D YTTTNR+PY++ S S L+ NYVRNSVK +DAYDG V LY+ D +DPL+ AY KAFPDL T +DE P + H RY D+F VQ+++ A+YHVTD +F QGN W ++ +P
Sbjct: 539 TGDTKILYQRDIADRVDKLAPFLDFDADPYPVVIDGKVVWVLDGYTTTNRYPYSE-----SFSGQGGLA-HDFNYVRNSVKATIDAYDGTVTLYVIDEEDPLIRAYGKAFPDLFTDIDEMPEELRAHLRYPEDLFRVQADVYASYHVTDERRFYQGNAKWLLSPDP 698 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117061.3521.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig117061.3521.1 >prot_M-pyrifera_M_contig117061.3521.1 ID=prot_M-pyrifera_M_contig117061.3521.1|Name=mRNA_M-pyrifera_M_contig117061.3521.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=168bp TGDSEVIFNRDIVSRARTVAPFLEFDSDPYPIVADGRIQWIVDAYTTTNRback to top mRNA from alignment at M-pyrifera_M_contig117061:2..505+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig117061.3521.1 ID=mRNA_M-pyrifera_M_contig117061.3521.1|Name=mRNA_M-pyrifera_M_contig117061.3521.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=504bp|location=Sequence derived from alignment at M-pyrifera_M_contig117061:2..505+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig117061:2..505+ >mRNA_M-pyrifera_M_contig117061.3521.1 ID=mRNA_M-pyrifera_M_contig117061.3521.1|Name=mRNA_M-pyrifera_M_contig117061.3521.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1008bp|location=Sequence derived from alignment at M-pyrifera_M_contig117061:2..505+ (Macrocystis pyrifera P11B4 male)back to top |