mRNA_M-pyrifera_M_contig11687.3488.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11687.3488.1 vs. uniprot
Match: A0A6H5JHK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHK5_9PHAE) HSP 1 Score: 176 bits (445), Expect = 3.240e-47 Identity = 152/326 (46.63%), Postives = 180/326 (55.21%), Query Frame = 1
Query: 4 DIHEENMSRVSAMSPDEIAEAQMEIRSILTPASLEMLKRRGRAK--GTTDVSATKS------------------------RKSASALKPAAAAVAVTAPDTTAAAT----EISSGA------------------------------QAGAPTRAQRAATAAGGVDSEEALEAALLTLPPGERAKSSWTLSXXXXXXXXXXXXXXXXXXXXXSDGAEFM-EGDAAARAEARVDLDGVVVAVAAGKGPGA----------LHHHGDDPERAGYTPSELVRLARSTVAGQRQLALRALAGVLRGRAACIARGETPPHPRLPEMLPVAIR 768
DIHEEN+SR+SAMSPDEIA+AQ EIR+ L P +LEML RRGR + G T + ++ A + + +A T+ + A T + S+G +GAPT AQR G+DS+EALEAALLTLPP ER KS WTL+ XXXXXXXXXX GD EARVDL+G VV +A LHHHGDDP++AGYTPSELVRLARSTV+GQRQLALRALAG+L+ RAACIARG+TPPH RLPEMLPVAIR
Sbjct: 273 DIHEENLSRISAMSPDEIADAQQEIRAALPPGALEMLLRRGRGRAGGGKTAGCTSAPXXXXXXXXXXXXXXXXXXXXXXXEENHRAGRRRSPVLATTSHGESTAPTGDEGDRSNGGGPSRXXXXXXXXXXXXXXXXXAGXSPSRKTTSGAPTGAQRXXXXXXGIDSKEALEAALLTLPPEEREKSRWTLTAGGDAAVTAAEXXXXXXXXXXXXXXXXXGAGD-----EARVDLNGAVVVLAGXXXXXXXXXXXXXXXXLHHHGDDPDKAGYTPSELVRLARSTVSGQRQLALRALAGLLKVRAACIARGQTPPHRRLPEMLPVAIR 593
BLAST of mRNA_M-pyrifera_M_contig11687.3488.1 vs. uniprot
Match: D8LHI7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHI7_ECTSI) HSP 1 Score: 147 bits (372), Expect = 1.430e-36 Identity = 129/265 (48.68%), Postives = 140/265 (52.83%), Query Frame = 1
Query: 4 DIHEENMSRVSAMSPDEIAEAQMEIRSILTPASLEMLKRRGRAKGTTDVSATKSRKSASALKPAAAAVAVTAPDTTAAATEISSGAQAGAPTRAQRAATAAGGVDSEEALEAALLTLPPGERAKSSWTLSXXXXXXXXXXXXXXXXXXXXXSDGAEFMEGDAAARAEARVDLDGVVVAVA----------AGKGPGALHHHGDDPERAGYTPSELVRLARSTVAGQRQLALRALAGVLRGRAACIARGETPPHPRLPEMLPVAIR 768
DIHEEN+SR+SAMSPDEIA+AQ EIR+ L P +LEML RRGR AKS WTL+ XXXXXXXXXXXXXXXXX EARVDLDG V G+G ALHHHGDDP++AGYTPSELVRLARSTV+GQRQLALRALAGVLR RAACIARG+TPPH RLPEMLPVAIR
Sbjct: 268 DIHEENLSRISAMSPDEIADAQQEIRAALPPGALEMLLRRGRGXX-----------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKSRWTLTVSGDXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXEARVDLDGAVXXXXXXXXXXXXXXGGEGLEALHHHGDDPDKAGYTPSELVRLARSTVSGQRQLALRALAGVLRFRAACIARGQTPPHRRLPEMLPVAIR 483
BLAST of mRNA_M-pyrifera_M_contig11687.3488.1 vs. uniprot
Match: A0A835YNX8_9STRA (RPAP1_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNX8_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 2.460e-11 Identity = 48/87 (55.17%), Postives = 51/87 (58.62%), Query Frame = 1
Query: 508 RVDLDGVVVAVAAGKGPGALHHHGDDPERAGYTPSELVRLARSTVAGQRQLALRALAGVLRGRAACIARGETPPHPRLPEMLPVAIR 768
RVD G V A P HGD TP ELV LARS V QR+ ALRALAG+LR R A IA G PPH RLPEMLP A+R
Sbjct: 176 RVDERGAAVPPRAS--PAEAPRHGDPHH---LTPDELVALARSDVPAQRRAALRALAGLLRARRAAIAAGAPPPHARLPEMLPAALR 257
BLAST of mRNA_M-pyrifera_M_contig11687.3488.1 vs. uniprot
Match: A0A813BUX8_9DINO (Rpap1 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813BUX8_9DINO) HSP 1 Score: 73.6 bits (179), Expect = 2.500e-11 Identity = 42/80 (52.50%), Postives = 49/80 (61.25%), Query Frame = 1
Query: 565 LHHHGDDPERAGYTPSELVRLARSTVAGQRQLALRALAGVLRGRAACIARGETPPH------------PRLPEMLPVAIR 768
LHHHGD PE AGYT ELV LARSTV GQR LAL A+ G+L+ R A I R PP P +P++LPV +R
Sbjct: 250 LHHHGDAPEEAGYTLRELVGLARSTVGGQRTLALTAITGILQRRRAAIVRTYAPPGAAAPGPPADISPPLIPKVLPVILR 329
BLAST of mRNA_M-pyrifera_M_contig11687.3488.1 vs. uniprot
Match: K3X1P0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1P0_GLOUD) HSP 1 Score: 64.3 bits (155), Expect = 5.650e-8 Identity = 90/277 (32.49%), Postives = 119/277 (42.96%), Query Frame = 1
Query: 1 ADIHEENMSRVSAMSPDEIAEAQMEIRSILTPASLE-MLKRRGRAKGTTDV---SATKSRKSASALKPAAAAVAVTAPDTTAAATEISSGAQAGAPTRAQRAATAAGGVDSEEALEAALLTLPPGERAKSSWTLSXXXXXXXXXXXXXXXXXXXXXSDGAEFMEGDAA---ARAEA------RVDLDGVVVAVAAGKGP------GALHHHGDDPERAGYTPSELVRLARSTVAGQRQLALRALAGVLRGRAACIARGE-TPPHPR-LPEMLPVAIR 768
A+I N +R+ MS DEI EAQ E+ L P LE + +R +A SA K+R +A+ A VT D E +S AP + + SEE L LPP ERAK W + + + +GDA AR E R D +G + V+ G G L HHGDDP+ AGYT SEL+ LARSTV+ QR +AL + +L+ R T PR LP LP+ +R
Sbjct: 166 AEIDRTNNARLQEMSLDEIREAQQELMRSLDPTLLEKFMNKRKKAPAAVKKPAESAAKTRTNAAGTTVAIGKSVVTNNDEGEQKEEAASDQPPAAPIDLAK-------IKSEEQLFETAKLLPPEERAKHEWMQAVPDASASA-------------APSSATTKGDATKANARKEKLTATTERFDFNGDRI-VSGGDGGVQHATHSGLFHHGDDPDAAGYTMSELIHLARSTVSSQRAMALTTITKILQKRIVYQQEQNLTNVFPRVLPTNLPITLR 421
BLAST of mRNA_M-pyrifera_M_contig11687.3488.1 vs. uniprot
Match: A0A0R3TWG1_RODNA (Uncharacterized protein n=1 Tax=Rodentolepis nana TaxID=102285 RepID=A0A0R3TWG1_RODNA) HSP 1 Score: 60.5 bits (145), Expect = 8.330e-7 Identity = 42/91 (46.15%), Postives = 50/91 (54.95%), Query Frame = 1
Query: 505 ARVDLDGVVVAVAAGKGPGA-------LHHHGDDPERAGYTPSELVRLARSTVAGQRQLALRALAGVLRGRAACIARGETPPHPRLPEMLP 756
AR DL+G VV PGA LHHHG++PER GYT SEL LA ST QR++AL +LA L A RG H +P +LP
Sbjct: 310 ARFDLEGRVVP------PGANIPMHLGLHHHGEEPERGGYTISELFHLASSTHPNQRRIALSSLAAAL----AASRRGYHATHLAIPSLLP 390
BLAST of mRNA_M-pyrifera_M_contig11687.3488.1 vs. uniprot
Match: T0PPP8_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0PPP8_SAPDV) HSP 1 Score: 59.3 bits (142), Expect = 2.490e-6 Identity = 36/64 (56.25%), Postives = 40/64 (62.50%), Query Frame = 1
Query: 508 RVDLDGVVVAVAAGKGP---GALHHHGDDPERAGYTPSELVRLARSTVAGQRQLALRALAGVLR 690
RVD DG V+ G P L+HHGDDP+R GYT ELV LARSTVA QR +A L VLR
Sbjct: 221 RVDFDGHVLPATDGLLPPSHSGLYHHGDDPDRPGYTIEELVLLARSTVASQRVVACTVLGKVLR 284
BLAST of mRNA_M-pyrifera_M_contig11687.3488.1 vs. uniprot
Match: A0A820S0L4_9BILA (Hypothetical protein (Fragment) n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A820S0L4_9BILA) HSP 1 Score: 54.3 bits (129), Expect = 6.080e-6 Identity = 30/71 (42.25%), Postives = 44/71 (61.97%), Query Frame = 1
Query: 562 ALHHHGDDPERAGYTPSELVRLARSTVAGQRQLALRALAGVLRGRAACIARGETPPHPRLPEMLPVAIRYL 774
ALHHHG++PE AGYT EL L+RSTV QR +AL+ L+ ++R I + P +P+++ I +L
Sbjct: 12 ALHHHGEEPEAAGYTLDELFHLSRSTVLQQRVIALQTLSNIIRQAHTGIYDHDLQ-IPLIPKLIEAGILFL 81
BLAST of mRNA_M-pyrifera_M_contig11687.3488.1 vs. uniprot
Match: A0A2H1C6V7_FASHE (RPAP1-like protein n=1 Tax=Fasciola hepatica TaxID=6192 RepID=A0A2H1C6V7_FASHE) HSP 1 Score: 57.0 bits (136), Expect = 1.170e-5 Identity = 37/78 (47.44%), Postives = 45/78 (57.69%), Query Frame = 1
Query: 502 EARVDLDGVVVAVAAGKGPG-ALHHHGDDPERAGYTPSELVRLARSTVAGQRQLALRALAGVLRGRAACIARGETPPH 732
+AR DL+G V+ A LHHHG++PERAGYT EL LARS+V QR+LAL +L A RG PH
Sbjct: 58 QARFDLNGFVIPPEAVLDVHLGLHHHGEEPERAGYTVGELFHLARSSVPAQRRLAL----AILTSSLAQSRRGRHVPH 131
BLAST of mRNA_M-pyrifera_M_contig11687.3488.1 vs. uniprot
Match: A0A183AV85_9TREM (RPAP1_C domain-containing protein n=1 Tax=Echinostoma caproni TaxID=27848 RepID=A0A183AV85_9TREM) HSP 1 Score: 57.0 bits (136), Expect = 1.330e-5 Identity = 35/63 (55.56%), Postives = 41/63 (65.08%), Query Frame = 1
Query: 502 EARVDLDGVVVAVAAGKGPG-ALHHHGDDPERAGYTPSELVRLARSTVAGQRQLALRALAGVL 687
+AR DL+G VV A LHHHG++PERAGYT EL LARS+V QR+LAL LA L
Sbjct: 27 QARFDLNGFVVPPEAVLDVHLGLHHHGEEPERAGYTVGELFHLARSSVPAQRRLALSGLAASL 89 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11687.3488.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11687.3488.1 >prot_M-pyrifera_M_contig11687.3488.1 ID=prot_M-pyrifera_M_contig11687.3488.1|Name=mRNA_M-pyrifera_M_contig11687.3488.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=258bp MSRVSAMSPDEIAEAQMEIRSILTPASLEMLKRRGRAKGTTDVSATKSRKback to top mRNA from alignment at M-pyrifera_M_contig11687:697..2167- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11687.3488.1 ID=mRNA_M-pyrifera_M_contig11687.3488.1|Name=mRNA_M-pyrifera_M_contig11687.3488.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1471bp|location=Sequence derived from alignment at M-pyrifera_M_contig11687:697..2167- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11687:697..2167- >mRNA_M-pyrifera_M_contig11687.3488.1 ID=mRNA_M-pyrifera_M_contig11687.3488.1|Name=mRNA_M-pyrifera_M_contig11687.3488.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1548bp|location=Sequence derived from alignment at M-pyrifera_M_contig11687:697..2167- (Macrocystis pyrifera P11B4 male)back to top |