mRNA_M-pyrifera_M_contig116868.3486.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig116868.3486.1
Unique NamemRNA_M-pyrifera_M_contig116868.3486.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig116868.3486.1 vs. uniprot
Match: A0A2P6N766_9EUKA (Kinase n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N766_9EUKA)

HSP 1 Score: 80.9 bits (198), Expect = 2.090e-15
Identity = 49/132 (37.12%), Postives = 73/132 (55.30%), Query Frame = 1
Query:    4 VYHPSAG-YKFMHKYEGRKLTEKMFPLAVQQFFFDGERVRTDIIEDFLPKLQEVRETTASN-GFNLYSTSLLLVYEGSQCASAAYSGPIEEPRERTRLCMIDFAHAFQADDTDEIDDGYQFGIGNFIDILES 393
            V+ PS   Y  + KY+GR ++ ++    +  FF++G+   T I+  F+ KL+ + +   +   + LYSTSLLL+YEGS+  S    G          + MIDFAHAF        DDGY +G+GN I ILE+
Sbjct:  198 VWQPSTRTYTRVDKYQGRSMSIEVLKKTISNFFWNGKVYNTSILLSFIQKLKILHKIAQTELNYRLYSTSLLLLYEGSENPSYKDVG--------VDIKMIDFAHAFPKSGKTNNDDGYAYGLGNLIQILEN 321          
BLAST of mRNA_M-pyrifera_M_contig116868.3486.1 vs. uniprot
Match: UPI0018E3BEFC (inositol hexakisphosphate kinase 3 n=1 Tax=Arvicola amphibius TaxID=1047088 RepID=UPI0018E3BEFC)

HSP 1 Score: 75.9 bits (185), Expect = 1.870e-13
Identity = 48/126 (38.10%), Postives = 70/126 (55.56%), Query Frame = 1
Query:   40 KYEGRKLTEKMFPLAVQQFFFDGERVRTDIIEDFLPKLQEVRETTAS-NGFNLYSTSLLLVYEGSQCASAAYSGPIEEPRERTRLCMIDFAHAFQADDTDEI------DDGYQFGIGNFIDILESI 396
            KY GRKL+E+ F  A+ QF  DG R+RT+++E  L +LQ +     S + +  YS+SLL++Y+G +    + SG   +   R    MIDFAHA      +E       D GY FG+ N I IL+ +
Sbjct:  264 KYYGRKLSEEGFRQALSQFLHDGTRLRTELLEPILHRLQALLTVIRSQSSYRFYSSSLLIIYDGQETTQGSPSGAPAKVDVR----MIDFAHATYKGSWNEHTTHEGPDPGYIFGLENLIGILQDL 385          
BLAST of mRNA_M-pyrifera_M_contig116868.3486.1 vs. uniprot
Match: A0A3L7IKW9_CRIGR (Kinase n=1 Tax=Cricetulus griseus TaxID=10029 RepID=A0A3L7IKW9_CRIGR)

HSP 1 Score: 73.9 bits (180), Expect = 7.520e-13
Identity = 50/129 (38.76%), Postives = 70/129 (54.26%), Query Frame = 1
Query:   40 KYEGRKLTEKMFPLAVQQFFFDGERVRTDIIEDFLPKLQEVRETTAS-NGFNLYSTSLLLVYEGS---QCASAAYSGPIEEPRERTRLCMIDFAH-----AFQADDTDE-IDDGYQFGIGNFIDILESI 396
            KY GRKL+EK F  A+ QF  DG R+RT+++E  L +LQ +     S + +  YS+SLL++Y+G    Q A     G       +  + MIDFAH     ++    T E  D GY FG+ N I IL+ I
Sbjct:  214 KYYGRKLSEKGFRQALSQFLHDGTRLRTELLEPILRRLQALLAVIRSQSSYRFYSSSLLIIYDGQEPPQNALETTPGTTSGDPAKVDVRMIDFAHTTYKGSWNGHTTHEGPDPGYIFGLENLIGILQDI 342          
BLAST of mRNA_M-pyrifera_M_contig116868.3486.1 vs. uniprot
Match: G3I6U9_CRIGR (Kinase n=11 Tax=Cricetidae TaxID=337677 RepID=G3I6U9_CRIGR)

HSP 1 Score: 73.9 bits (180), Expect = 9.250e-13
Identity = 50/129 (38.76%), Postives = 70/129 (54.26%), Query Frame = 1
Query:   40 KYEGRKLTEKMFPLAVQQFFFDGERVRTDIIEDFLPKLQEVRETTAS-NGFNLYSTSLLLVYEGS---QCASAAYSGPIEEPRERTRLCMIDFAH-----AFQADDTDE-IDDGYQFGIGNFIDILESI 396
            KY GRKL+EK F  A+ QF  DG R+RT+++E  L +LQ +     S + +  YS+SLL++Y+G    Q A     G       +  + MIDFAH     ++    T E  D GY FG+ N I IL+ I
Sbjct:  264 KYYGRKLSEKGFRQALSQFLHDGTRLRTELLEPILRRLQALLAVIRSQSSYRFYSSSLLIIYDGQEPPQNALETTPGTTSGDPAKVDVRMIDFAHTTYKGSWNGHTTHEGPDPGYIFGLENLIGILQDI 392          
BLAST of mRNA_M-pyrifera_M_contig116868.3486.1 vs. uniprot
Match: A0A1D1VE82_RAMVA (Kinase n=1 Tax=Ramazzottius varieornatus TaxID=947166 RepID=A0A1D1VE82_RAMVA)

HSP 1 Score: 70.9 bits (172), Expect = 1.270e-11
Identity = 44/137 (32.12%), Postives = 74/137 (54.01%), Query Frame = 1
Query:   25 YKFMHKYEGRKLTEKMFPLAVQQFFFDGERVRTDIIEDFLPKLQEVRETTAS-NGFNLYSTSLLLVYEGSQ---CASAAYSGPIEEPRERTRLCMIDFAHAFQADDTDEI----DDGYQFGIGNFIDILESILQKSS 411
            Y    KY GR L  + F  A++ F F+G R  ++++ D + +L+ ++ +  +  GF  YS+SLL++YEGS     +S++  GP    +    + MIDFAH+     +       D GY FG+ N I +LE +L  ++
Sbjct:  329 YTTWDKYYGRALCVEGFKTALRDFLFNGARFLSELVPDIVSQLKRLQVSVRTLEGFRFYSSSLLIMYEGSDQQVSSSSSIDGPKMPTKRGVDIKMIDFAHSSLPHASTVRHKGPDSGYLFGLDNLIRLLEELLAAAT 465          
BLAST of mRNA_M-pyrifera_M_contig116868.3486.1 vs. uniprot
Match: A0A553P1X6_TIGCA (Kinase n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553P1X6_TIGCA)

HSP 1 Score: 70.1 bits (170), Expect = 2.300e-11
Identity = 47/143 (32.87%), Postives = 71/143 (49.65%), Query Frame = 1
Query:    1 QVYHPSAGYKFMH-KYEGRKLTEKMFPLAVQQFFFDGERVRTDIIEDFLPKLQEVRET-TASNGFNLYSTSLLLVYEGSQCASAAYSGPIEEPRERTRLCMIDFAHAFQADDTDEI-----DDGYQFGIGNFIDILESILQKS 408
            QVY    G    H KY GR L  +     +++F  + E VR DI++  L KL+ +R+  T+   F  Y++SLL+ Y+G                 +  L +IDFAH+   D  D +     DDG+ FG+ NF+ IL  I +K+
Sbjct:  316 QVYKAKNGRYVCHNKYFGRTLNNQGLKSTIEEFLINEETVRMDIVDRLLDKLERMRKIITSLESFRFYTSSLLITYDGYGL-------------NKIDLRIIDFAHSTHKDFEDAVVHKGPDDGFLFGLNNFLGILAEIRKKA 445          
BLAST of mRNA_M-pyrifera_M_contig116868.3486.1 vs. uniprot
Match: A0A2G9RE37_LITCT (Kinase (Fragment) n=1 Tax=Lithobates catesbeianus TaxID=8400 RepID=A0A2G9RE37_LITCT)

HSP 1 Score: 66.6 bits (161), Expect = 1.510e-10
Identity = 50/134 (37.31%), Postives = 74/134 (55.22%), Query Frame = 1
Query:   25 YKFMHKYEGRKLTEKMFPLAVQQFFFDGERVRTDIIEDFLPKLQE---VRETTASNGFNLYSTSLLLVYEGSQCASAAYSGPI-EEPRERTRLCMIDFAHA----FQADDT--DEIDDGYQFGIGNFIDILESI 396
            Y  ++KY GR L+ + F  ++ Q+  +G+R+R D+ E  L KLQ    V E  AS  +  YS+SLL++Y+G     +A   P+ +EP     + MIDFAH+    F+ D    D  D GY  G+ + I ILE I
Sbjct:  109 YLCLNKYYGRGLSAEGFRQSLYQYLHNGDRLRVDLFEPILSKLQRLISVLEMQAS--YRFYSSSLLIIYDGIDRPRSA--DPLSQEPPPNVDVRMIDFAHSTFKGFRDDPKVHDGPDKGYVLGLRSLISILELI 238          
BLAST of mRNA_M-pyrifera_M_contig116868.3486.1 vs. uniprot
Match: UPI000B4F3668 (inositol hexakisphosphate kinase 3 n=1 Tax=Meriones unguiculatus TaxID=10047 RepID=UPI000B4F3668)

HSP 1 Score: 66.6 bits (161), Expect = 3.580e-10
Identity = 46/133 (34.59%), Postives = 66/133 (49.62%), Query Frame = 1
Query:   40 KYEGRKLTEKMFPLAVQQFFFDGERVRTDIIEDFLPKLQEVRETTASNG-FNLYSTSLLLVYEGS-------QCASAAYSGPIEEPRERTRLCMIDFAHAFQADDTDEI------DDGYQFGIGNFIDILESI 396
            KY GRKL+ + F  A+ QF  DG R+R++++E  L +LQ +     S   +  YS+SLL++Y+G        Q    + SG       +  + MIDFAH       +E       D GY FG+ N I IL  I
Sbjct:  264 KYYGRKLSVEGFRQALSQFLHDGTRLRSELLEPILHRLQALLTVIRSQASYRFYSSSLLIIYDGQEPPQPAPQTTQDSTSGGAAGHPAKVDVRMIDFAHTTYKGSWNESTTYEGPDPGYIFGLENLIRILRDI 396          
BLAST of mRNA_M-pyrifera_M_contig116868.3486.1 vs. uniprot
Match: IP6K3_MOUSE (Inositol hexakisphosphate kinase 3 n=13 Tax=Tetrapoda TaxID=32523 RepID=IP6K3_MOUSE)

HSP 1 Score: 65.5 bits (158), Expect = 9.060e-10
Identity = 46/130 (35.38%), Postives = 69/130 (53.08%), Query Frame = 1
Query:   40 KYEGRKLTEKMFPLAVQQFFFDGERVRTDIIEDFLPKLQEVRETTAS-NGFNLYSTSLLLVYEGS--QCASAAYSGPIE--EPRERTRLCMIDFAHAFQADDTDEI------DDGYQFGIGNFIDILESI 396
            KY GRKL+ + F  A+ QF  DG R+R +++E  L +LQ +     S + +  YS+S+L++Y+G   Q    + SG +   +P  +  + MIDFAH       +E       D GY FG+ N I IL  I
Sbjct:  264 KYYGRKLSVEGFRQALSQFLHDGTRLRAELLEPILRRLQALLTVIRSQSSYRFYSSSVLIIYDGEPPQTTQGSTSGGVTSGDPA-KVDVRMIDFAHTTFKGSWNEHTTYEGPDPGYIFGLENLIGILRDI 392          
BLAST of mRNA_M-pyrifera_M_contig116868.3486.1 vs. uniprot
Match: UPI001403D7CC (inositol polyphosphate multikinase isoform X4 n=1 Tax=Petromyzon marinus TaxID=7757 RepID=UPI001403D7CC)

HSP 1 Score: 63.9 bits (154), Expect = 2.850e-9
Identity = 47/169 (27.81%), Postives = 77/169 (45.56%), Query Frame = 1
Query:    1 QVYHPSAGYKFMH-KYEGRKLTEKMFPLAVQQFFFDGERVRTDIIEDFLPKLQEVRETTASNG-FNLYSTSLLLVYEGSQ------------------CASAAYS-------------GPIEEPRERTRLCMIDFAHAFQADDTDEIDDGYQFGIGNFIDILESILQKS 408
            +VY P      ++ K+ GR L        + +FF +G  +R D +E  + +L+ +         +N YS+SLL+VYEG+                   C   A S             G +   R+   + +IDFAHAF ++   E+D+GY +G+ N I +L  IL+K+
Sbjct:  179 RVYQPETNTDVVYDKFFGRSLEPDNLREGISKFFHNGHCLRLDALECVIQRLENIYTWFQQQRIWNFYSSSLLMVYEGNAPPQTVHSTRTTSPATCCLCRQVAESRTKDVHRDYARSVGTVRTCRQHVDVKLIDFAHAFISE---EVDEGYIYGLNNLIAVLREILEKA 344          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116868.3486.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2P6N766_9EUKA2.090e-1537.12Kinase n=1 Tax=Planoprotostelium fungivorum TaxID=... [more]
UPI0018E3BEFC1.870e-1338.10inositol hexakisphosphate kinase 3 n=1 Tax=Arvicol... [more]
A0A3L7IKW9_CRIGR7.520e-1338.76Kinase n=1 Tax=Cricetulus griseus TaxID=10029 RepI... [more]
G3I6U9_CRIGR9.250e-1338.76Kinase n=11 Tax=Cricetidae TaxID=337677 RepID=G3I6... [more]
A0A1D1VE82_RAMVA1.270e-1132.12Kinase n=1 Tax=Ramazzottius varieornatus TaxID=947... [more]
A0A553P1X6_TIGCA2.300e-1132.87Kinase n=1 Tax=Tigriopus californicus TaxID=6832 R... [more]
A0A2G9RE37_LITCT1.510e-1037.31Kinase (Fragment) n=1 Tax=Lithobates catesbeianus ... [more]
UPI000B4F36683.580e-1034.59inositol hexakisphosphate kinase 3 n=1 Tax=Merione... [more]
IP6K3_MOUSE9.060e-1035.38Inositol hexakisphosphate kinase 3 n=13 Tax=Tetrap... [more]
UPI001403D7CC2.850e-927.81inositol polyphosphate multikinase isoform X4 n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig116868contigM-pyrifera_M_contig116868:22..435 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score81.6
Seed ortholog evalue3.1e-13
Seed eggNOG ortholog130081.XP_005703145.1
KEGG rclassRC00002
KEGG koko:K07756
KEGG ReactionR09087,R10548
KEGG Pathwayko04070,ko04138,map04070,map04138
Hectar predicted targeting categoryother localisation
EggNOG free text desc.inositol phosphate biosynthetic process
EggNOG OGsKOG1620@1,KOG1620@2759
EC2.7.4.21
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size414
Cds size414
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815685.1349387-CDS-M-pyrifera_M_contig116868:21..4351622815685.1349387-CDS-M-pyrifera_M_contig116868:21..435Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig116868 22..435 -
1692277520.9832978-CDS-M-pyrifera_M_contig116868:21..4351692277520.9832978-CDS-M-pyrifera_M_contig116868:21..435Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig116868 22..435 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig116868.3486.1prot_M-pyrifera_M_contig116868.3486.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig116868 22..435 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig116868.3486.1

>prot_M-pyrifera_M_contig116868.3486.1 ID=prot_M-pyrifera_M_contig116868.3486.1|Name=mRNA_M-pyrifera_M_contig116868.3486.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=138bp
QVYHPSAGYKFMHKYEGRKLTEKMFPLAVQQFFFDGERVRTDIIEDFLPK
LQEVRETTASNGFNLYSTSLLLVYEGSQCASAAYSGPIEEPRERTRLCMI
DFAHAFQADDTDEIDDGYQFGIGNFIDILESILQKSS*
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mRNA from alignment at M-pyrifera_M_contig116868:22..435-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig116868.3486.1 ID=mRNA_M-pyrifera_M_contig116868.3486.1|Name=mRNA_M-pyrifera_M_contig116868.3486.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=414bp|location=Sequence derived from alignment at M-pyrifera_M_contig116868:22..435- (Macrocystis pyrifera P11B4 male)
CAGGTTTACCACCCTTCGGCAGGATACAAGTTCATGCACAAGTACGAGGG TCGCAAATTGACTGAGAAGATGTTCCCCCTGGCCGTACAGCAGTTCTTCT TTGATGGAGAGCGAGTACGGACTGATATCATCGAGGACTTCTTGCCCAAG CTCCAGGAGGTGCGGGAGACGACGGCGTCTAATGGCTTCAACCTCTACTC CACCTCTCTCTTGCTGGTGTACGAGGGAAGCCAGTGCGCTAGTGCTGCAT ATTCTGGTCCAATTGAAGAGCCAAGGGAGCGCACACGGCTCTGCATGATC GATTTCGCCCACGCTTTCCAGGCAGACGACACCGACGAGATTGACGACGG TTACCAGTTTGGCATTGGTAACTTCATCGATATCCTTGAGAGCATCCTTC AAAAGAGCTCGTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig116868:22..435-

>mRNA_M-pyrifera_M_contig116868.3486.1 ID=mRNA_M-pyrifera_M_contig116868.3486.1|Name=mRNA_M-pyrifera_M_contig116868.3486.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=828bp|location=Sequence derived from alignment at M-pyrifera_M_contig116868:22..435- (Macrocystis pyrifera P11B4 male)
CAGGTTTACCACCCTTCGGCAGGATACAAGTTCATGCACAAGTACGAGGG
TCGCAAATTGACTGAGAAGATGTTCCCCCTGGCCGTACAGCAGTTCTTCT
TTGATGGAGAGCGAGTACGGACTGATATCATCGAGGACTTCTTGCCCAAG
CTCCAGGAGGTGCGGGAGACGACGGCGTCTAATGGCTTCAACCTCTACTC
CACCTCTCTCTTGCTGGTGTACGAGGGAAGCCAGTGCGCTAGTGCTGCAT
ATTCTGGTCCAATTGAAGAGCCAAGGGAGCGCACACGGCTCTGCATGATC
GATTTCGCCCACGCTTTCCAGGCAGACGACACCGACGAGATTGACGACGG
TTACCAGTTTGGCATTGGTAACTTCATCGATATCCTTGAGAGCATCCTTC
AAAAGAGCTCGTGACAGGTTTACCACCCTTCGGCAGGATACAAGTTCATG
CACAAGTACGAGGGTCGCAAATTGACTGAGAAGATGTTCCCCCTGGCCGT
ACAGCAGTTCTTCTTTGATGGAGAGCGAGTACGGACTGATATCATCGAGG
ACTTCTTGCCCAAGCTCCAGGAGGTGCGGGAGACGACGGCGTCTAATGGC
TTCAACCTCTACTCCACCTCTCTCTTGCTGGTGTACGAGGGAAGCCAGTG
CGCTAGTGCTGCATATTCTGGTCCAATTGAAGAGCCAAGGGAGCGCACAC
GGCTCTGCATGATCGATTTCGCCCACGCTTTCCAGGCAGACGACACCGAC
GAGATTGACGACGGTTACCAGTTTGGCATTGGTAACTTCATCGATATCCT
TGAGAGCATCCTTCAAAAGAGCTCGTGA
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