mRNA_M-pyrifera_M_contig116863.3484.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig116863.3484.1 vs. uniprot
Match: A0A1M5DDS4_9BACT (Glucose/arabinose dehydrogenase, beta-propeller fold n=1 Tax=Aliifodinibius roseus TaxID=1194090 RepID=A0A1M5DDS4_9BACT) HSP 1 Score: 305 bits (782), Expect = 4.200e-100 Identity = 141/185 (76.22%), Postives = 161/185 (87.03%), Query Frame = 1
Query: 1 IAVADNGDIYVKTRSEQGGVIALRDTTGNFKADIIEYFSDMTPMSQGIVWETGMAIHIGYIWASNRDAVYRWELPKNGALVPEGAPEIIVDGFPDQWAHSSKSIEFDGMGNLYVNIGSPSNACQQEQRSPGSPGHDPCPELEQHAGIWRFSDSEVGQKFSPDARYATGIRNVVGLDWNTDVNALY 555
IAVA NGDIYVKTRSE+GG+ ALRDTTG+FKAD+IE FS MTPM GI+WETGMAIH GY+WASN+ AVYRW +P+ GALVPEG PEI+V GFP+Q AH+SKSI FD G LYVN+G+PSN CQ+EQR+P SPG DPCP+LE+HAGIWRFS S+ GQ FSPDARYATG+RNVVGLDWNTDV ALY
Sbjct: 84 IAVAANGDIYVKTRSEEGGIAALRDTTGDFKADVIERFSTMTPMGSGILWETGMAIHDGYLWASNKVAVYRWPMPEGGALVPEGDPEIVVSGFPEQNAHASKSIAFDNSGYLYVNVGTPSNNCQEEQRTPESPGLDPCPQLERHAGIWRFSASDTGQTFSPDARYATGLRNVVGLDWNTDVGALY 268
BLAST of mRNA_M-pyrifera_M_contig116863.3484.1 vs. uniprot
Match: A0A316TUU0_9BACT (Sorbosone dehydrogenase n=2 Tax=Rhodohalobacter mucosus TaxID=2079485 RepID=A0A316TUU0_9BACT) HSP 1 Score: 274 bits (701), Expect = 1.500e-88 Identity = 127/186 (68.28%), Postives = 149/186 (80.11%), Query Frame = 1
Query: 1 IAVADNGDIYVKTRSEQGGVIALRDTTGNFKADIIEYFSDMTPMSQGIVWETGMAIHIGYIWASNRDAVYRWELPKNGALVPEGAPEIIVDGFPDQWAHSSKSIEFDGMGNLYVNIGSPSNACQQEQRSPGSPGHDPCPELEQHAGIWRFSDSEVGQKFSPDA-RYATGIRNVVGLDWNTDVNALY 555
IAVA NGDIYVKTRSE+GG+ ALRDTTG+FKAD+IE FSDMTPM GI+WETGMA+H GYIWASN +AVYRW +P+NGALVP G PEI+ GFP+Q +H SKS FD G LYVN+G+PSNACQ+ R+PGSPG DPCP+LE+ AGIWRF + Q D RYA GIRNVVGLDWN++ +LY
Sbjct: 37 IAVAPNGDIYVKTRSEEGGIAALRDTTGDFKADVIELFSDMTPMGSGILWETGMAVHNGYIWASNTEAVYRWPMPENGALVPGGNPEIVATGFPEQESHDSKSFTFDDSGYLYVNVGAPSNACQESSRTPGSPGLDPCPQLERQAGIWRFHADSLNQTQQQDGLRYAMGIRNVVGLDWNSENGSLY 222
BLAST of mRNA_M-pyrifera_M_contig116863.3484.1 vs. uniprot
Match: A0A4R3KL59_9SPHI (Glucose/arabinose dehydrogenase n=1 Tax=Anseongella ginsenosidimutans TaxID=496056 RepID=A0A4R3KL59_9SPHI) HSP 1 Score: 279 bits (714), Expect = 1.860e-88 Identity = 125/185 (67.57%), Postives = 154/185 (83.24%), Query Frame = 1
Query: 1 IAVADNGDIYVKTRSEQGGVIALRDTTGNFKADIIEYFSDMTPMSQGIVWETGMAIHIGYIWASNRDAVYRWELPKNGALVPEGAPEIIVDGFPDQWAHSSKSIEFDGMGNLYVNIGSPSNACQQEQRSPGSPGHDPCPELEQHAGIWRFSDSEVGQKFSPDARYATGIRNVVGLDWNTDVNALY 555
IAVA NGDIYVKTRS++GG+ ALRDTTG+F+ADIIEYF DMT GI+WETG+AIH GY+WASN AVYRW +P+ AL+PEG PEI+V GFP+Q +H+SKS FDG G+LYV++G+PSNACQ+++R+ GSPG +PCP LE+H GIWRF ++ GQ FS DARYATG+RNVVGLDWN +ALY
Sbjct: 88 IAVAPNGDIYVKTRSQEGGIAALRDTTGDFRADIIEYFGDMTGTGDGILWETGIAIHDGYLWASNTVAVYRWPMPEGNALIPEGEPEIVVSGFPEQQSHASKSFAFDGRGHLYVSVGAPSNACQEQERTNGSPGIEPCPLLEEHGGIWRFDANQTGQTFSADARYATGLRNVVGLDWNVAGDALY 272
BLAST of mRNA_M-pyrifera_M_contig116863.3484.1 vs. uniprot
Match: UPI001F45DFC7 (PQQ-dependent sugar dehydrogenase n=2 Tax=unclassified Rhodohalobacter TaxID=2621813 RepID=UPI001F45DFC7) HSP 1 Score: 275 bits (704), Expect = 2.110e-88 Identity = 128/186 (68.82%), Postives = 153/186 (82.26%), Query Frame = 1
Query: 1 IAVADNGDIYVKTRSEQGGVIALRDTTGNFKADIIEYFSDMTPMSQGIVWETGMAIHIGYIWASNRDAVYRWELPKNGALVPEGAPEIIVDGFPDQWAHSSKSIEFDGMGNLYVNIGSPSNACQQEQRSPGSPGHDPCPELEQHAGIWRFSDSEVGQKFSPDA-RYATGIRNVVGLDWNTDVNALY 555
IA+ +NGDIYVKTRSE+GG+ ALRDTTG+FKADIIE FSDMTP+ GI+WETGMAIH G+IWASN ++VYRW +P++G+LVPEG PEI+V GFP+Q +H SKSI FD G LYVN+G+PSNACQQE R+PGS G DPCP+LE+ AGIWRF +GQ D +ATGIRNVVGLDWN + NALY
Sbjct: 85 IAIGENGDIYVKTRSEEGGIAALRDTTGDFKADIIERFSDMTPVRGGILWETGMAIHDGHIWASNTESVYRWPMPEDGSLVPEGEPEIVVTGFPEQQSHDSKSIAFDNNGYLYVNVGAPSNACQQEPRTPGSMGEDPCPQLERQAGIWRFHADSLGQTQQDDGTHFATGIRNVVGLDWNHEDNALY 270
BLAST of mRNA_M-pyrifera_M_contig116863.3484.1 vs. uniprot
Match: A0A521DBE5_9BACT (Glucose/arabinose dehydrogenase, beta-propeller fold n=2 Tax=Aliifodinibius sediminis TaxID=1214077 RepID=A0A521DBE5_9BACT) HSP 1 Score: 273 bits (697), Expect = 3.080e-87 Identity = 123/185 (66.49%), Postives = 148/185 (80.00%), Query Frame = 1
Query: 1 IAVADNGDIYVKTRSEQGGVIALRDTTGNFKADIIEYFSDMTPMSQGIVWETGMAIHIGYIWASNRDAVYRWELPKNGALVPEGAPEIIVDGFPDQWAHSSKSIEFDGMGNLYVNIGSPSNACQQEQRSPGSPGHDPCPELEQHAGIWRFSDSEVGQKFSPDARYATGIRNVVGLDWNTDVNALY 555
IAVA NGD+YVKTRSE+GG+ ALRDTTG+F+AD+IE FSD TP+ GI+WETGMAIH GY+WASN +VYRW +P++G LVP G PEI+V GFP+Q +H SKSI FD G LYVN+G+PSNACQ+E R+PGSPG DPCP+LE+ AGIWRF +GQ YATGIRNVVGLDW+T+ LY
Sbjct: 88 IAVASNGDLYVKTRSEEGGIAALRDTTGDFRADVIERFSDRTPVGSGILWETGMAIHDGYLWASNTGSVYRWPMPEDGRLVPVGDPEIVVTGFPEQRSHDSKSIAFDDSGYLYVNVGAPSNACQEEPRTPGSPGQDPCPQLERQAGIWRFPADSLGQMQQEGTHYATGIRNVVGLDWHTETGVLY 272
BLAST of mRNA_M-pyrifera_M_contig116863.3484.1 vs. uniprot
Match: A0A3M9NLS8_9BACT (Sorbosone dehydrogenase n=1 Tax=Hanamia caeni TaxID=2294116 RepID=A0A3M9NLS8_9BACT) HSP 1 Score: 264 bits (675), Expect = 8.850e-83 Identity = 117/185 (63.24%), Postives = 151/185 (81.62%), Query Frame = 1
Query: 1 IAVADNGDIYVKTRSEQGGVIALRDTTGNFKADIIEYFSDMTPMSQGIVWETGMAIHIGYIWASNRDAVYRWELPKNGALVPEGAPEIIVDGFPDQWAHSSKSIEFDGMGNLYVNIGSPSNACQQEQRSPGSPGHDPCPELEQHAGIWRFSDSEVGQKFSPDARYATGIRNVVGLDWNTDVNALY 555
IAV+DNGDIY+KTRSEQGG++ALRDT G+ +ADII+YF +M +GI+WE+G+AIH GY++ASN +VYRW +PK+G LVP+G PE++V GFP+Q +H SKS FD G+LYV +G+PSNACQ E+R+PGSPG +PCP LE+H GIWRF ++ Q FS ARYATG+RNVVGLDWNT N+L+
Sbjct: 74 IAVSDNGDIYMKTRSEQGGIVALRDTNGDHRADIIKYFGNMNETKEGILWESGIAIHNGYLYASNTTSVYRWPMPKDGELVPKGEPEMVVSGFPEQQSHRSKSFTFDKSGHLYVAVGAPSNACQVEERTPGSPGIEPCPLLEEHGGIWRFDANKTNQTFSAAARYATGLRNVVGLDWNTTTNSLF 258
BLAST of mRNA_M-pyrifera_M_contig116863.3484.1 vs. uniprot
Match: A0A359E8L2_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A359E8L2_9BACT) HSP 1 Score: 188 bits (477), Expect = 7.700e-58 Identity = 86/101 (85.15%), Postives = 94/101 (93.07%), Query Frame = 1
Query: 1 IAVADNGDIYVKTRSEQGGVIALRDTTGNFKADIIEYFSDMTPMSQGIVWETGMAIHIGYIWASNRDAVYRWELPKNGALVPEGAPEIIVDGFPDQWAHSS 303
+AVADNGDIYVKTRSE+GGVI LRDTTG+F+ADIIEYFSDMT MSQGIVWETGMAIH GYIWASN+ VYRWE+P+NGALVPEG PEIIV GFPDQWAH+S
Sbjct: 74 MAVADNGDIYVKTRSEKGGVITLRDTTGDFQADIIEYFSDMTEMSQGIVWETGMAIHNGYIWASNKQEVYRWEMPQNGALVPEGEPEIIVSGFPDQWAHAS 174
BLAST of mRNA_M-pyrifera_M_contig116863.3484.1 vs. uniprot
Match: A0A521CQT7_9BACT (Glucose/arabinose dehydrogenase, beta-propeller fold n=1 Tax=Aliifodinibius sediminis TaxID=1214077 RepID=A0A521CQT7_9BACT) HSP 1 Score: 195 bits (495), Expect = 2.110e-57 Identity = 95/188 (50.53%), Postives = 129/188 (68.62%), Query Frame = 1
Query: 1 IAVADNGDIYVKTRSEQ--GGVIALRDTTGNFKADIIEYFSDMTPMSQGIVWETGMAIHIGYIWASNRDAVYRWELPKNGALVPEGAPEIIVDGFPDQWAHSSKSIEFDGMGNLYVNIGSPSNACQQEQRSPGSPGHDPCPELEQHAGIWRFSDSEVGQKFSPDA-RYATGIRNVVGLDWNTDVNALY 555
I A+NGD+YV ++ GG+ ALRD G+ KAD +EYF T TG+ ++ GY+++S+ ++ R+++ N L P+G PE++V+GFP+Q +H++KS FD GNLYVNIG PSNACQ+E R+PGSPG DPCP+LE H GIW+F+ E GQ F D RYATGIRN V LDWN + + LY
Sbjct: 59 ITAAENGDLYVALSEKKNGGGIAALRDEDGDGKADQVEYFGPHTG--------TGIQLYNGYLYSSSDTSIVRFQMTDN-QLAPQGEPEMVVEGFPNQSSHAAKSFTFDQSGNLYVNIGGPSNACQEEPRTPGSPGQDPCPQLENHGGIWQFAADEAGQTFQEDGQRYATGIRNSVALDWNNNADQLY 237
BLAST of mRNA_M-pyrifera_M_contig116863.3484.1 vs. uniprot
Match: UPI0018C8E982 (PQQ-dependent sugar dehydrogenase n=1 Tax=Aureivirga sp. CE67 TaxID=1788983 RepID=UPI0018C8E982) HSP 1 Score: 193 bits (491), Expect = 8.130e-57 Identity = 95/188 (50.53%), Postives = 130/188 (69.15%), Query Frame = 1
Query: 1 IAVADNGDIYVKTRS--EQGGVIALRDTTGNFKADIIEYFSDMTPMSQGIVWETGMAIHIGYIWASNRDAVYRWELPKNGALVPEGAPEIIVDGFPDQWAHSSKSIEFDGMGNLYVNIGSPSNACQQEQRSPGSPGHDPCPELEQHAGIWRFSDSEVGQKFSPDA-RYATGIRNVVGLDWNTDVNALY 555
I V DNGD+Y+ R E G++ALRD+TG+ KAD+IEYF D S G TG+ IH GY++ SN V+R++ K G L+PE PE+++ GFP+Q H SK + FD G+++V++G+PSNAC ++ R+PGSPG DPCPEL+ H G+WRF +++GQ D YATGIRN + +DWN DVN LY
Sbjct: 64 IVVNDNGDVYMSLRQLHEGKGIVALRDSTGDGKADMIEYFGD----SPG----TGLGIHHGYLYFSNDTNVFRYKF-KEGELLPELNPELVISGFPEQDQHQSKPLSFDDKGHIFVDVGAPSNACMEQTRTPGSPGQDPCPELKWHGGVWRFDANKLGQTQQKDGVLYATGIRNAMAMDWNHDVNELY 242
BLAST of mRNA_M-pyrifera_M_contig116863.3484.1 vs. uniprot
Match: UPI001F3FC3BA (PQQ-dependent sugar dehydrogenase n=1 Tax=Membranicola sp. C281 TaxID=2904244 RepID=UPI001F3FC3BA) HSP 1 Score: 190 bits (483), Expect = 1.320e-55 Identity = 99/188 (52.66%), Postives = 129/188 (68.62%), Query Frame = 1
Query: 1 IAVADNGDIYVKTRSEQ--GGVIALRDTTGNFKADIIEYFSDMTPMSQGIVWETGMAIHIGYIWASNRDAVYRWELPKNGALVPEGAPEIIVDGFPDQWAHSSKSIEFDGMGNLYVNIGSPSNACQQEQRSPGSPGHDPCPELEQHAGIWRFSDSEVGQKFSPDA-RYATGIRNVVGLDWNTDVNALY 555
IAV DNGDIYV RS Q G++ALRDT G+ KAD YF + T TG+ IH +++ S+ AVYR+ L K+ LVPEG PE I+ GFPDQ H++KS FD GN+YVN+G+PSN+CQ+E R+PGS G +PCP+LE+ AG+W+F+ ++ GQ D RYATGIRN V L W++ NALY
Sbjct: 61 IAVNDNGDIYVALRSAQDGNGLVALRDTNGDGKADSTAYFGEYTG--------TGVRIHDNHLYFSSTTAVYRYPL-KDEQLVPEGEPETIISGFPDQNTHAAKSFTFDNEGNIYVNVGAPSNSCQEEARTPGSLGIEPCPQLERQAGVWQFNATKTGQTQVDDGHRYATGIRNSVALRWSSTANALY 239 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116863.3484.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig116863.3484.1 >prot_M-pyrifera_M_contig116863.3484.1 ID=prot_M-pyrifera_M_contig116863.3484.1|Name=mRNA_M-pyrifera_M_contig116863.3484.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=185bp IAVADNGDIYVKTRSEQGGVIALRDTTGNFKADIIEYFSDMTPMSQGIVWback to top mRNA from alignment at M-pyrifera_M_contig116863:2..556+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig116863.3484.1 ID=mRNA_M-pyrifera_M_contig116863.3484.1|Name=mRNA_M-pyrifera_M_contig116863.3484.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=555bp|location=Sequence derived from alignment at M-pyrifera_M_contig116863:2..556+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig116863:2..556+ >mRNA_M-pyrifera_M_contig116863.3484.1 ID=mRNA_M-pyrifera_M_contig116863.3484.1|Name=mRNA_M-pyrifera_M_contig116863.3484.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1110bp|location=Sequence derived from alignment at M-pyrifera_M_contig116863:2..556+ (Macrocystis pyrifera P11B4 male)back to top |