mRNA_M-pyrifera_M_contig1168.3479.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig1168.3479.1
Unique NamemRNA_M-pyrifera_M_contig1168.3479.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig1168.3479.1 vs. uniprot
Match: D7FUV7_ECTSI (Mevalonate kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUV7_ECTSI)

HSP 1 Score: 286 bits (731), Expect = 2.200e-90
Identity = 162/239 (67.78%), Postives = 177/239 (74.06%), Query Frame = 1
Query:    1 LSMTAFSASLPVGAGLGSSAALCVATSAALTRLS----------GXXXXXXXXRRPSPSQLERINAWAFAGETVLHGTPSGLDNTVSCFGGAIKFVKGTGGAGN---PIPGFPPLPIVLTNTLVPKDTRALVAGVRRLLEAHHRAVAKIFDSIGFIADEFSDLS---------LSGGMFGDPRGAVGGT--PLSVECVGELVQMNHRLLCALGVGHPALDRVCAVATAHGCKSKLTGAG 645
            LS+ AFSASLPVGAGLGSSAALCVATSAALTRL+          G        RRPS S+LERINAWAFAGETVLHGTPSGLDNTVSC+GGAIKFVKG  GA N   PIPGFPPLPI+LTNTLVPK+T ALVAGVRRLLEAH  A    FD+IG IA EF D +         ++    GD   A      PL+ ECVGEL +MNHRLLCALGVGHPAL+RVC VA+AHGC+SKLTGAG
Sbjct:  220 LSLRAFSASLPVGAGLGSSAALCVATSAALTRLADIISRAAVEGGGERGGGGSRRPSGSELERINAWAFAGETVLHGTPSGLDNTVSCYGGAIKFVKGMDGAANTTEPIPGFPPLPILLTNTLVPKNTGALVAGVRRLLEAHRPATTATFDAIGAIAAEFLDRAAASVPAATPVAAAECGDGAAAPAAPAQPLTAECVGELAEMNHRLLCALGVGHPALERVCEVASAHGCRSKLTGAG 458          
BLAST of mRNA_M-pyrifera_M_contig1168.3479.1 vs. uniprot
Match: A0A7S4B5A5_CHRCT (Mevalonate kinase n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B5A5_CHRCT)

HSP 1 Score: 157 bits (396), Expect = 7.580e-42
Identity = 106/251 (42.23%), Postives = 134/251 (53.39%), Query Frame = 1
Query:    1 LSMTAFSASLPVGAGLGSSAALCVATSAALTRLS---------------------------------GXXXXXXXXRRPSPSQLERINAWAFAGETVLHGTPSGLDNTVSCFGGAIKFVKGTGGAG---NPIPGFPPLPIVLTNTLVPKDTRALVAGVRRLLEAHHRAVAKIFDSIGFIADEFSDLSLSGGMFGDPRGAVGGTPLSVECVGELVQMNHRLLCALGVGHPALDRVCAVATAHGCKSKLTGAG 645
            L++   SA LPVGAGLGSSAA  V+ SAAL RL                                            RPSP+  + INAWA++ E +LHGTPSGLDN+VSC+G A+K ++          P+  FP L ++LTNT VP+ TR  V+GVRRL E+       +F++I  +AD F DL +SGG       +V G  L+   +G LV MNH LL  LGV  PAL  VC VA  HG  +KLTGAG
Sbjct:  143 LNLQVRSAKLPVGAGLGSSAAFSVSLSAALLRLQLLCVSMAAEAPESLLAQARDAMSPAGQRLASLLQTHDIDGRSARPSPTAKQLINAWAYSSECILHGTPSGLDNSVSCYGEAVKLMRAAPAEALLFEPVKRFPKLQVLLTNTKVPRKTREQVSGVRRLHESLPSVTIPVFEAISSVADAFLDL-ISGG-------SVEGAALAQ--IGRLVSMNHALLTVLGVSAPALQLVCDVAGKHGLPTKLTGAG 383          
BLAST of mRNA_M-pyrifera_M_contig1168.3479.1 vs. uniprot
Match: UPI001C716BC7 (mevalonate kinase-like n=1 Tax=Penaeus japonicus TaxID=27405 RepID=UPI001C716BC7)

HSP 1 Score: 154 bits (388), Expect = 2.070e-41
Identity = 91/213 (42.72%), Postives = 128/213 (60.09%), Query Frame = 1
Query:   19 SASLPVGAGLGSSAALCVATSAALTRLSGXXXXXXXXRRPSPSQLERINAWAFAGETVLHGTPSGLDNTVSCFGGAIKFVKGTGGAGNPIPGFPPLPIVLTNTLVPKDTRALVAGVRRLLEAHHRAVAKIFDSIGFIADE----FSDLSLSGGMFGDPRGAVGGTPLSVECVGELVQMNHRLLCALGVGHPALDRVCAVATAHGCKSKLTGAG 645
            S+ LP GAGLGSSAA  V  S AL  ++G        +    + LE+++ WAF  E ++HGTPSG+DN++  +GGA+ F  GT     P+   PPL ++L NT VP+ T+ALV GVR   E H   +  I +S+  +A+       DL+ +G    D          + E VGELV++NH LLCALGV HP+LDR+ A+A ++G ++KLTGAG
Sbjct:  139 SSQLPTGAGLGSSAAYAVCLSGALLHIAGRLS-----QGEDKANLEKVSQWAFRSEQIIHGTPSGIDNSICTYGGAVNFKSGTS---TPVE-VPPLQVLLVNTKVPRSTKALVTGVRERRERHPSVIDPILESLDSLAERGIQALHDLASAGR---DQESVA-----AHETVGELVEINHSLLCALGVSHPSLDRLVALARSNGLRAKLTGAG 334          
BLAST of mRNA_M-pyrifera_M_contig1168.3479.1 vs. uniprot
Match: UPI0018A72451 (mevalonate kinase-like n=2 Tax=Penaeus TaxID=133894 RepID=UPI0018A72451)

HSP 1 Score: 151 bits (381), Expect = 2.230e-40
Identity = 91/211 (43.13%), Postives = 123/211 (58.29%), Query Frame = 1
Query:   19 SASLPVGAGLGSSAALCVATSAALTRLSGXXXXXXXXRRPSPSQLERINAWAFAGETVLHGTPSGLDNTVSCFGGAIKFVKGTGGAGNPIPGFPPLPIVLTNTLVPKDTRALVAGVRRLLEAHHRAVAKIFDSIGFIADEFSDL--SLSGGMFGDPRGAVGGTPLSVECVGELVQMNHRLLCALGVGHPALDRVCAVATAHGCKSKLTGAG 645
            S+ LP GAGLGSSAA  V  S AL  ++G             + LE++  WAF  E ++HGTPSG+DN++  +GGA+ F    GG   P+   PPL ++L NT VP+ T+ALV GVR   E H   +  I DS+  +A+        L+       R A      + E VGEL+++NH LLCALGV HP+LDR+ A+A A+G + KLTGAG
Sbjct:  139 SSQLPTGAGLGSSAAYAVCLSGALLHIAGRLGPGE-----DQANLEKVCQWAFRSEQIIHGTPSGIDNSICTYGGAVNF---KGGTSAPVE-VPPLHVLLVNTKVPRSTKALVTGVRERRERHPSVIDPILDSLDALAERGIQALHDLASATRDQDRAA------AHETVGELLEINHSLLCALGVSHPSLDRLVALARANGLRGKLTGAG 334          
BLAST of mRNA_M-pyrifera_M_contig1168.3479.1 vs. uniprot
Match: A0A7S2NTU7_9STRA (Mevalonate kinase n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NTU7_9STRA)

HSP 1 Score: 147 bits (370), Expect = 2.760e-39
Identity = 100/221 (45.25%), Postives = 127/221 (57.47%), Query Frame = 1
Query:   28 LPVGAGLGSSAALCVATSAALTRL---SGXXXXXXXXR-------RPSPSQLERINAWAFAGETVLHGTPSGLDNTVSCFGGAIKFVKGTGGAGNPIPGF-----PPLPIVLTNTLVPKDTRALVAGVRRLLEAHHRAVAKIFDSIGFIADEFSDLSLSGGMFGDPRGAVGGTPLSVECVGELVQMNHRLLCALGVGHPALDRVCAVATAHGCKSKLTGAG 645
            LP+GAGLGSSAA CVA SAAL RL   +G        R       RP  + L+ INAWAFA E V+HG PSGLDNTVSC+GGA+ + K     GN +  F     PPL ++LTNT +P+ T+ALVAGV ++ E     V  +F +IG I+D+F      G      RG      +S     +L++ N  LL A+GV H ALD +C +    G  SKLTGAG
Sbjct:   21 LPLGAGLGSSAAFCVACSAALYRLREKTGIMGVAAVDRNIKDNNTRPEQASLDIINAWAFASEGVIHGNPSGLDNTVSCYGGAVYYQKDAE-TGN-LRAFHELVVPPLDMILTNTFIPRSTKALVAGVHKVKEDFEFTV-DVFAAIGRISDQFRKALDPG-----DRGYRDTAKIS-----QLIRTNQNLLKAIGVSHKALDEICHITEQMGVASKLTGAG 228          
BLAST of mRNA_M-pyrifera_M_contig1168.3479.1 vs. uniprot
Match: A0A3R7N861_PENVA (Mevalonate kinase n=2 Tax=Penaeus vannamei TaxID=6689 RepID=A0A3R7N861_PENVA)

HSP 1 Score: 147 bits (370), Expect = 3.960e-39
Identity = 88/208 (42.31%), Postives = 121/208 (58.17%), Query Frame = 1
Query:   28 LPVGAGLGSSAALCVATSAALTRLSGXXXXXXXXRRPSPSQLERINAWAFAGETVLHGTPSGLDNTVSCFGGAIKFVKGTGGAGNPIPGFPPLPIVLTNTLVPKDTRALVAGVRRLLEAHHRAVAKIFDSIGFIADEFSDL--SLSGGMFGDPRGAVGGTPLSVECVGELVQMNHRLLCALGVGHPALDRVCAVATAHGCKSKLTGAG 645
            LP GAGLGSSAA  V  S AL    G             + LE++  WAF  E ++HGTPSG+DN++  +GGA+ F    GGA  P+   PPL ++L NT VP+ T+AL++GVR   E H  A+  I DS+  +A+        L+       R A      + E + EL+++N  LLCALGV HP+LDR+ A+A A+G ++KLTGAG
Sbjct:  102 LPTGAGLGSSAAYAVCLSGALLTSQGRLDPGEGR-----ANLEKVCRWAFRSEQIIHGTPSGIDNSICTYGGAVNF---KGGASTPVE-VPPLQVLLVNTKVPRSTKALISGVRERRERHPSAIDPILDSLDALAERGIQALHDLASATRDQDRAA------AHETIAELIEINQGLLCALGVSHPSLDRLVALAQANGLRAKLTGAG 294          
BLAST of mRNA_M-pyrifera_M_contig1168.3479.1 vs. uniprot
Match: A0A835Z5H2_9STRA (Mevalonate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5H2_9STRA)

HSP 1 Score: 145 bits (367), Expect = 1.270e-37
Identity = 101/239 (42.26%), Postives = 126/239 (52.72%), Query Frame = 1
Query:    1 LSMTAFSASLPVGAGLGSSAALCVATSAALTRLS-----------------------GXXXXXXXXRRPSPSQLERINAWAFAGETVLHGTPSGLDNTVSCFGGAIKFVKGTGGAGNPIPGFPPLPIVLTNTLVP-KDTRALVAGVRRLLEAHHRAVAKIFDSIGFIADEFSDLSLSGGMFGDPRGAVGGTPLSVECVGELVQMNHRLLCALGVGHPALDRVCAVATAHGCKSKLTGAG 645
            L + A S  LPV AGLGSSAALCVAT+AAL  L                         X       R   P  LE +NAWA+A ET++HG PSGLDNTVSC+GG +++V+        +  FP L ++LT+T V  + TR LVA V  LL       A++ ++I  IA +F                  G  ++ E VG L+ MNH LL ALGVGH +LD VCA A   GC SKLTGAG
Sbjct:  148 LRVRAVSCCLPVSAGLGSSAALCVATAAALLELRRRLAXXXXXXXXXXXXXXXXXXXXXAPAGKRERVWQPEGLETLNAWAYAAETLIHGNPSGLDNTVSCYGGVLRYVREPRST-ETVATFPQLSMLLTDTRVAGRSTRRLVAHVATLLGRCPDVTARVLEAIDAIAKQFLAC---------------GDEMTAEEVGALMVMNHHLLGALGVGHASLDAVCAAAARRGCWSKLTGAG 370          
BLAST of mRNA_M-pyrifera_M_contig1168.3479.1 vs. uniprot
Match: UPI001B34F857 (mevalonate kinase n=2 Tax=Ochotona TaxID=9977 RepID=UPI001B34F857)

HSP 1 Score: 144 bits (362), Expect = 1.850e-37
Identity = 98/210 (46.67%), Postives = 117/210 (55.71%), Query Frame = 1
Query:   28 LPVGAGLGSSAALCVATSAALTRLSGXXXXXXXXRRPS----PSQLERINAWAFAGETVLHGTPSGLDNTVSCFGGAIKFVKGTGGAGNPIPGFPPLPIVLTNTLVPKDTRALVAGVRRLLEAHHRAVAKIFDSIGFIADEFSDLSLSGGMFGDPRGAVGGTPLSVECVGELVQMNHRLLCALGVGHPALDRVCAVATAHGCKSKLTGAG 645
            LP GAGLGSSAA  V  +AAL  L            P+       LE IN WAF GE V+HG PSG+DN VS +GGA++F +G   A   +   P L I+LTNT VP+ T+ALVAGVR  L      V  +  SI  I+ E   +       GD   A   TP     + EL+ MN  LL ALGVGH +LDR+C V TAHG  SKLTGAG
Sbjct:  137 LPTGAGLGSSAAYSVCLAAALLTLCDDIPDPRKDGAPTGRWAKEDLELINKWAFQGERVIHGNPSGVDNAVSTWGGALRFQQGKISA---LQRPPALQILLTNTKVPRSTKALVAGVRSRLIKFPEIVDPLLTSINAISLECERV------LGDLVAAP--TPEQYLLLEELIDMNQHLLNALGVGHASLDRLCQVTTAHGLHSKLTGAG 335          
BLAST of mRNA_M-pyrifera_M_contig1168.3479.1 vs. uniprot
Match: UPI0003291DE4 (mevalonate kinase isoform X3 n=2 Tax=Dasypus novemcinctus TaxID=9361 RepID=UPI0003291DE4)

HSP 1 Score: 144 bits (362), Expect = 2.140e-37
Identity = 96/210 (45.71%), Postives = 118/210 (56.19%), Query Frame = 1
Query:   28 LPVGAGLGSSAALCVATSAALT----RLSGXXXXXXXXRRPSPSQLERINAWAFAGETVLHGTPSGLDNTVSCFGGAIKFVKGTGGAGNPIPGFPPLPIVLTNTLVPKDTRALVAGVRRLLEAHHRAVAKIFDSIGFIADEFSDLSLSGGMFGDPRGAVGGTPLSVECVGELVQMNHRLLCALGVGHPALDRVCAVATAHGCKSKLTGAG 645
            LP GAGLGSSAA  V  +AAL      +           R +   LE IN WAF GE V+HG PSG+DN VS +GGA+++ +G     +P+   PPL I+LTNT VP+ T+ALVAGVR  L      VA +  SI  I+ E   +   G M  DP       P     + EL+ MN   L ALGVGH +LDR+C V TA G  SKLTGAG
Sbjct:  145 LPTGAGLGSSAAYSVCVAAALLTACEEIPNPLKDGHHTNRWTGEDLELINRWAFQGERVIHGNPSGVDNAVSTWGGALRYQQGKI---SPLKRPPPLKILLTNTKVPRSTKALVAGVRSRLTKFPEIVAPLLTSIDAISVECERVL--GEMATDP------VPEQYLVLEELIDMNQHHLNALGVGHASLDRLCQVTTARGLHSKLTGAG 343          
BLAST of mRNA_M-pyrifera_M_contig1168.3479.1 vs. uniprot
Match: A0A5F9CAN5_RABIT (Mevalonate kinase n=1 Tax=Oryctolagus cuniculus TaxID=9986 RepID=A0A5F9CAN5_RABIT)

HSP 1 Score: 141 bits (356), Expect = 1.200e-36
Identity = 97/210 (46.19%), Postives = 116/210 (55.24%), Query Frame = 1
Query:   28 LPVGAGLGSSAALCVATSAALTRLSGXXXXXXXXRRPSP----SQLERINAWAFAGETVLHGTPSGLDNTVSCFGGAIKFVKGTGGAGNPIPGFPPLPIVLTNTLVPKDTRALVAGVRRLLEAHHRAVAKIFDSIGFIADEFSDLSLSGGMFGDPRGAVGGTPLSVECVGELVQMNHRLLCALGVGHPALDRVCAVATAHGCKSKLTGAG 645
            LP GAGLGSSAA  V  +AAL               PS       LE IN WAF GE V+HG PSG+DN VS +GGA+++ +G   A   +   P L I+LTNT VP+ T+ALVAGVR  L      VA +  SI  I+ E   +       GD   AV  TP     + EL+ MN   L ALGVGH +LDR+C V  AHG  SKLTGAG
Sbjct:  129 LPTGAGLGSSAAYSVCLAAALLTACEDIPNPQKDGAPSSRWAKDDLELINKWAFQGERVIHGNPSGVDNAVSTWGGALRYQQGKISA---LQRPPTLQILLTNTKVPRSTKALVAGVRSRLLKFPEIVAPLLTSIDAISLECERV------LGDM--AVAATPEQYLVLEELIDMNQHHLNALGVGHASLDRLCQVTMAHGLHSKLTGAG 327          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1168.3479.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUV7_ECTSI2.200e-9067.78Mevalonate kinase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A7S4B5A5_CHRCT7.580e-4242.23Mevalonate kinase n=1 Tax=Chrysotila carterae TaxI... [more]
UPI001C716BC72.070e-4142.72mevalonate kinase-like n=1 Tax=Penaeus japonicus T... [more]
UPI0018A724512.230e-4043.13mevalonate kinase-like n=2 Tax=Penaeus TaxID=13389... [more]
A0A7S2NTU7_9STRA2.760e-3945.25Mevalonate kinase n=2 Tax=Leptocylindrus danicus T... [more]
A0A3R7N861_PENVA3.960e-3942.31Mevalonate kinase n=2 Tax=Penaeus vannamei TaxID=6... [more]
A0A835Z5H2_9STRA1.270e-3742.26Mevalonate kinase n=1 Tax=Tribonema minus TaxID=30... [more]
UPI001B34F8571.850e-3746.67mevalonate kinase n=2 Tax=Ochotona TaxID=9977 RepI... [more]
UPI0003291DE42.140e-3745.71mevalonate kinase isoform X3 n=2 Tax=Dasypus novem... [more]
A0A5F9CAN5_RABIT1.200e-3646.19Mevalonate kinase n=1 Tax=Oryctolagus cuniculus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1168contigM-pyrifera_M_contig1168:22382..23839 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score285.4
Seed ortholog evalue2.3e-74
Seed eggNOG ortholog2880.D7FUV7
Preferred nameMK
KEGG rclassRC00002,RC00017
KEGG koko:K00869
KEGG ReactionR02245
KEGG Pathwayko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146
KEGG ModuleM00095
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004496,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006084,GO:0006139,GO:0006163,GO:0006629,GO:0006637,GO:0006644,GO:0006720,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008202,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009150,GO:0009240,GO:0009259,GO:0009987,GO:0016125,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0019287,GO:0019637,GO:0019693,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0035383,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046490,GO:0046872,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901576,GO:1901615
EggNOG free text desc.mevalonate kinase activity
EggNOG OGsCOG1577@1,KOG1511@2759
Ec32 ortholog descriptionMevalonate kinase
Ec32 orthologEc-26_004370.1
EC2.7.1.36
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons4
Model size675
Cds size669
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1168.3479.1prot_M-pyrifera_M_contig1168.3479.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig1168 22382..23833 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815684.6495342-CDS-M-pyrifera_M_contig1168:22381..226151622815684.6495342-CDS-M-pyrifera_M_contig1168:22381..22615Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1168 22382..22615 -
1692277520.7408466-CDS-M-pyrifera_M_contig1168:22381..226151692277520.7408466-CDS-M-pyrifera_M_contig1168:22381..22615Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1168 22382..22615 -
1622815684.6638155-CDS-M-pyrifera_M_contig1168:22696..228551622815684.6638155-CDS-M-pyrifera_M_contig1168:22696..22855Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1168 22697..22855 -
1692277520.753165-CDS-M-pyrifera_M_contig1168:22696..228551692277520.753165-CDS-M-pyrifera_M_contig1168:22696..22855Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1168 22697..22855 -
1622815684.6784863-CDS-M-pyrifera_M_contig1168:23347..235281622815684.6784863-CDS-M-pyrifera_M_contig1168:23347..23528Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1168 23348..23528 -
1692277520.7607784-CDS-M-pyrifera_M_contig1168:23347..235281692277520.7607784-CDS-M-pyrifera_M_contig1168:23347..23528Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1168 23348..23528 -
1622815684.689702-CDS-M-pyrifera_M_contig1168:23738..238331622815684.689702-CDS-M-pyrifera_M_contig1168:23738..23833Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1168 23739..23833 -
1692277520.7681718-CDS-M-pyrifera_M_contig1168:23738..238331692277520.7681718-CDS-M-pyrifera_M_contig1168:23738..23833Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1168 23739..23833 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815684.7003736-UTR-M-pyrifera_M_contig1168:23833..238391622815684.7003736-UTR-M-pyrifera_M_contig1168:23833..23839Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig1168 23834..23839 -
1692277520.775579-UTR-M-pyrifera_M_contig1168:23833..238391692277520.775579-UTR-M-pyrifera_M_contig1168:23833..23839Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig1168 23834..23839 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig1168.3479.1

>prot_M-pyrifera_M_contig1168.3479.1 ID=prot_M-pyrifera_M_contig1168.3479.1|Name=mRNA_M-pyrifera_M_contig1168.3479.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=223bp
MTAFSASLPVGAGLGSSAALCVATSAALTRLSGGGGGGGGGRRPSPSQLE
RINAWAFAGETVLHGTPSGLDNTVSCFGGAIKFVKGTGGAGNPIPGFPPL
PIVLTNTLVPKDTRALVAGVRRLLEAHHRAVAKIFDSIGFIADEFSDLSL
SGGMFGDPRGAVGGTPLSVECVGELVQMNHRLLCALGVGHPALDRVCAVA
TAHGCKSKLTGAGECCPVFFAI*
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mRNA from alignment at M-pyrifera_M_contig1168:22382..23839-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig1168.3479.1 ID=mRNA_M-pyrifera_M_contig1168.3479.1|Name=mRNA_M-pyrifera_M_contig1168.3479.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1458bp|location=Sequence derived from alignment at M-pyrifera_M_contig1168:22382..23839- (Macrocystis pyrifera P11B4 male)
CTGTCGATGACCGCGTTCAGCGCATCCCTTCCGGTGGGGGCTGGGCTCGG GTCCTCCGCCGCGCTCTGCGTTGCCACGTCGGCGGCCCTGACGCGCCTAT CGTCCCTCCTCTCCCAGGGAGGCCGTAGCAGTAGCGGAGTTGGCGCTGCT GCTGCTGCTGCTGCTGCTGGTGCTGCTGGTGGCGGCGGCGGTGGTGAGTA TTTTGAAGACCGGTGGCACAATCCGGCAGTCCTTGGATCTGCGAAGGAGG CGGTTAAAGGAGGGGATGGGGTGGGGATGGGGATGGGGGTGGCTGGCGGG TCGGGTGGTAGTGGTGGTGGTGGTGGTGGTGGTGGTGGCAGGCGGCCTTC ACCTTCCCAGCTCGAGCGGATAAACGCGTGGGCGTTCGCGGGGGAGACTG TGCTGCACGGGACGCCGTCGGGGTTAGACAACACCGTCAGCTGCTTCGGA GGGGCCATCAAGTTCGTGAAGGGCACCGGTGGCGCCGGGAACGTGACCGC TGTGAGTAGCCTCTTTCTTTGCGCCCGCGGGCGTAGGGAGAGCGGGGTGA TTCGGGGGGGGGGGGGGTCGTTTGGAAGTATGTTGTAGCAAGCGGTTGAT TGACACGGAGAAAAATGACGGTTGTCGTTGCATTCTGTCGGACTCCAACG TCTCTCGACGCCCCCCACGTTGGTTGCCATTTCTTCCGCGCCTTATTCGG GGTACGTGGCGCCTTTTTTTGTGTCAGAGGTTTATCCTGGAAAATACAGA TAACTCCACCAGATACAGACCATAGAGATAACTCCACTAAGGGCACGCGG ACAGTGTGGGGGCTGATAGAAACGCCGCAAAACGGCAAACCTCTCTTTCT TCTCAAGAGCCTGATTGCCCCGAAATCCGGCTCTGTTGCAATGTTTCCTC TCCCTCCCTCCCTCCCTCCTTCCCTACCTCCCTCCCGCTATGCCTGCCCC ACCTCCCTTCCTCCCTCGGATACGCCACCCACAGCCCATCCCCGGCTTCC CGCCGCTGCCGATAGTCTTGACGAACACCCTCGTCCCCAAGGACACCAGA GCCCTGGTCGCGGGGGTGCGCCGCCTCCTCGAGGCCCATCACCGCGCGGT CGCCAAGATTTTCGACTCTATAGGCTTCATCGCCGACGAATTCGTCGGCC GCGCCGCCGCCGCCGCCGGCTTTCCCCCCGGTGGCGGAGGTGGGAGCGGG GGTGAGAGCGGGGGCGGGAGCGAGAGCGATTTGTCGCTCTCCGGAGGCAT GTTTGGGGATCCCAGGGGGGCGGTGGGAGGGACTCCCCTGTCTGTGGAGT GCGTGGGGGAGCTTGTGCAGATGAACCACCGGCTTCTGTGCGCTCTGGGG GTGGGGCACCCCGCGCTGGATAGGGTGTGCGCAGTGGCCACTGCTCACGG GTGCAAGAGTAAACTCACGGGAGCCGGTGAGTGTTGTCCAGTGTTTTTTG CGATATGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig1168:22382..23839-

>mRNA_M-pyrifera_M_contig1168.3479.1 ID=mRNA_M-pyrifera_M_contig1168.3479.1|Name=mRNA_M-pyrifera_M_contig1168.3479.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1338bp|location=Sequence derived from alignment at M-pyrifera_M_contig1168:22382..23839- (Macrocystis pyrifera P11B4 male)
ATGACCGCGTTCAGCGCATCCCTTCCGGTGGGGGCTGGGCTCGGGTCCTC
CGCCGCGCTCTGCGTTGCCACGTCGGCGGCCCTGACGCGCCTATCATGAC
CGCGTTCAGCGCATCCCTTCCGGTGGGGGCTGGGCTCGGGTCCTCCGCCG
CGCTCTGCGTTGCCACGTCGGCGGCCCTGACGCGCCTATCTGGTGGTGGT
GGTGGTGGTGGTGGTGGCAGGCGGCCTTCACCTTCCCAGCTCGAGCGGAT
AAACGCGTGGGCGTTCGCGGGGGAGACTGTGCTGCACGGGACGCCGTCGG
GGTTAGACAACACCGTCAGCTGCTTCGGAGGGGCCATCAAGTTCGTGAAG
GGCACCGGTGGCGCCGGGAACTGGTGGTGGTGGTGGTGGTGGTGGTGGCA
GGCGGCCTTCACCTTCCCAGCTCGAGCGGATAAACGCGTGGGCGTTCGCG
GGGGAGACTGTGCTGCACGGGACGCCGTCGGGGTTAGACAACACCGTCAG
CTGCTTCGGAGGGGCCATCAAGTTCGTGAAGGGCACCGGTGGCGCCGGGA
ACCCCATCCCCGGCTTCCCGCCGCTGCCGATAGTCTTGACGAACACCCTC
GTCCCCAAGGACACCAGAGCCCTGGTCGCGGGGGTGCGCCGCCTCCTCGA
GGCCCATCACCGCGCGGTCGCCAAGATTTTCGACTCTATAGGCTTCATCG
CCGACGAATTCCCCATCCCCGGCTTCCCGCCGCTGCCGATAGTCTTGACG
AACACCCTCGTCCCCAAGGACACCAGAGCCCTGGTCGCGGGGGTGCGCCG
CCTCCTCGAGGCCCATCACCGCGCGGTCGCCAAGATTTTCGACTCTATAG
GCTTCATCGCCGACGAATTCAGCGATTTGTCGCTCTCCGGAGGCATGTTT
GGGGATCCCAGGGGGGCGGTGGGAGGGACTCCCCTGTCTGTGGAGTGCGT
GGGGGAGCTTGTGCAGATGAACCACCGGCTTCTGTGCGCTCTGGGGGTGG
GGCACCCCGCGCTGGATAGGGTGTGCGCAGTGGCCACTGCTCACGGGTGC
AAGAGTAAACTCACGGGAGCCGGTGAGTGTTGTCCAGTGTTTTTTGCGAT
ATGAAGCGATTTGTCGCTCTCCGGAGGCATGTTTGGGGATCCCAGGGGGG
CGGTGGGAGGGACTCCCCTGTCTGTGGAGTGCGTGGGGGAGCTTGTGCAG
ATGAACCACCGGCTTCTGTGCGCTCTGGGGGTGGGGCACCCCGCGCTGGA
TAGGGTGTGCGCAGTGGCCACTGCTCACGGGTGCAAGAGTAAACTCACGG
GAGCCGGTGAGTGTTGTCCAGTGTTTTTTGCGATATGA
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