mRNA_M-pyrifera_M_contig116740.3468.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig116740.3468.1 vs. uniprot
Match: A0A6I6AHC8_9PLAN (Uncharacterized protein n=5 Tax=Gimesia TaxID=1649453 RepID=A0A6I6AHC8_9PLAN) HSP 1 Score: 357 bits (917), Expect = 9.380e-116 Identity = 184/186 (98.92%), Postives = 184/186 (98.92%), Query Frame = 1
Query: 1 GDKVLDQAEYLARLKPEHQKVGRLEFLLGDFDQDQKMSFQEYFSTPAVPLGQRRIPDPVIDRVQQLLAMQEKRFRAQKDDIEKQSASEAPETPEKDGSSETKKRLNRVTQLPPGSVFEWNGNRNFSQEKSKLFLEIAYAVRTPQGVLLREPSGRVVNLRLFRHLDTDRNGRLSAGELLPQLQAENK 558
GDKVLDQAEYLARLKPEHQKVGRLEFLLGDFDQDQKMSF EYFSTPAVPLGQRRIPDPVIDRVQQLLAMQEKRFRAQKDDIEKQSASEAPETPEKDGSSETKKRLNRVTQ PPGSVFEWNGNRNFSQEKSKLFLEIAYAVRTPQGVLLREPSGRVVNLRLFRHLDTDRNGRLSAGELLPQLQAENK
Sbjct: 409 GDKVLDQAEYLARLKPEHQKVGRLEFLLGDFDQDQKMSFHEYFSTPAVPLGQRRIPDPVIDRVQQLLAMQEKRFRAQKDDIEKQSASEAPETPEKDGSSETKKRLNRVTQRPPGSVFEWNGNRNFSQEKSKLFLEIAYAVRTPQGVLLREPSGRVVNLRLFRHLDTDRNGRLSAGELLPQLQAENK 594
BLAST of mRNA_M-pyrifera_M_contig116740.3468.1 vs. uniprot
Match: A0A518FW02_9PLAN (EF hand n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518FW02_9PLAN) HSP 1 Score: 201 bits (512), Expect = 5.520e-57 Identity = 113/187 (60.43%), Postives = 135/187 (72.19%), Query Frame = 1
Query: 4 DKVLDQAEYLARLKPEHQKVGRLEFLLGDFDQDQKMSFQEYFSTPAVPLGQRRIPDPVIDRVQQLLAMQEKRFRAQKDDIEKQSASEAPETPEKDGSSETKKRLNRVTQLPPGSVFEWN--GNRNFSQEKSKLFLEIAYAVRTPQGVLLREPSGRVVNLRLFRHLDTDRNGRLSAGELLPQLQAENK 558
D VL+QAEYLA LKPEHQKVGRLEFLL D DQDQKMSF+EYFSTPAVPLGQRRIPDPV DRVQQ L ++ +R +D +Q + ++ R N + L S +W+ G+ S+E ++L LEIAYAVRTP+GVLLREP+GRVVN LFRHLDTD NG+LSA ELLP+L+ ENK
Sbjct: 410 DGVLEQAEYLATLKPEHQKVGRLEFLLSDHDQDQKMSFKEYFSTPAVPLGQRRIPDPVRDRVQQQLEALKESYRQWDNDSNQQLGLLELQQRQRAVRDLRSARSNGIPGLERTSFLDWDRDGDGQISREDAQLLLEIAYAVRTPEGVLLREPTGRVVNWMLFRHLDTDHNGQLSAAELLPRLETENK 596
BLAST of mRNA_M-pyrifera_M_contig116740.3468.1 vs. uniprot
Match: A0A2D5GW83_9PLAN (Uncharacterized protein n=3 Tax=Gimesia TaxID=1649453 RepID=A0A2D5GW83_9PLAN) HSP 1 Score: 158 bits (400), Expect = 1.470e-41 Identity = 95/191 (49.74%), Postives = 122/191 (63.87%), Query Frame = 1
Query: 4 DKVLDQAEYLARLKPEHQKVGRLEFLLGDFDQDQKMSFQEYFSTPAVPLGQRRIPDPVIDRVQQLLAMQEKRFRAQKDDIEKQSASEAPETPEKDGSSETKKRLNRVTQLPPG----SVFEWNGNRN--FSQEKSKLFLEIAYAVRTPQGVLLREPSGRVVNLRLFRHLDTDRNGRLSAGELLPQLQAENK 558
D VLDQAEYLA LKPEHQ+VGR +FL+ D +Q+ +M F EY +TP+V L QR PDPV DRVQ+ L + +RF+ + + Q SE + R R+T G S +W+ ++N SQ++ +L LEIAY VR G LLREPSGRVVNL LF HLD+D NG+LSAGEL PQL+ E +
Sbjct: 66 DGVLDQAEYLATLKPEHQQVGRRDFLITDQNQNLQMEFNEYHATPSVTLSQRLFPDPVSDRVQEQLTVLLRRFKVSDRNADDQF-------------SEQEFREARITTAISGLAQTSFVDWDRDKNGQISQDEIQLLLEIAYGVRNVDGQLLREPSGRVVNLMLFNHLDSDHNGQLSAGELKPQLKGEQQ 243
BLAST of mRNA_M-pyrifera_M_contig116740.3468.1 vs. uniprot
Match: UPI0018D6803F (hypothetical protein n=1 Tax=Gimesia alba TaxID=2527973 RepID=UPI0018D6803F) HSP 1 Score: 143 bits (360), Expect = 1.930e-36 Identity = 83/186 (44.62%), Postives = 113/186 (60.75%), Query Frame = 1
Query: 1 GDKVLDQAEYLARLKPEHQKVGRLEFLLGDFDQDQKMSFQEYFSTPAVPLGQRRIPDPVIDRVQQLLAMQEKRFRAQKDDIEKQSASEAPETPEKDGSSETKKRLNRVTQLPPGSVFEWNGNRNFSQEKSKLFLEIAYAVRTPQGVLLREPSGRVVNLRLFRHLDTDRNGRLSAGELLPQLQAENK 558
D LD+ EYLA LKPEHQKVG+ +F L D + DQ+M F EY TPAVPL QR+IPDPVIDRV+Q L+ P+ D +++++ + + P + + + N+ +++ + L+IAY VRT G LLREPSGRVVN LF HLDTD +G+LSAGEL PQ + + +
Sbjct: 188 NDGALDETEYLATLKPEHQKVGQRDFRLYDQNSDQRMEFDEYRGTPAVPLAQRQIPDPVIDRVRQQLST----------------------FPKADQNNDSQLSIEELKAAFP-ELADQHNNKPVARDDLQRLLDIAYGVRTLDGQLLREPSGRVVNWMLFTHLDTDHSGQLSAGELKPQFKQDQQ 350
BLAST of mRNA_M-pyrifera_M_contig116740.3468.1 vs. uniprot
Match: A0A517RK67_9PLAN (EF hand n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RK67_9PLAN) HSP 1 Score: 143 bits (360), Expect = 3.910e-36 Identity = 83/186 (44.62%), Postives = 113/186 (60.75%), Query Frame = 1
Query: 1 GDKVLDQAEYLARLKPEHQKVGRLEFLLGDFDQDQKMSFQEYFSTPAVPLGQRRIPDPVIDRVQQLLAMQEKRFRAQKDDIEKQSASEAPETPEKDGSSETKKRLNRVTQLPPGSVFEWNGNRNFSQEKSKLFLEIAYAVRTPQGVLLREPSGRVVNLRLFRHLDTDRNGRLSAGELLPQLQAENK 558
D LD+ EYLA LKPEHQKVG+ +F L D + DQ+M F EY TPAVPL QR+IPDPVIDRV+Q L+ P+ D +++++ + + P + + + N+ +++ + L+IAY VRT G LLREPSGRVVN LF HLDTD +G+LSAGEL PQ + + +
Sbjct: 466 NDGALDETEYLATLKPEHQKVGQRDFRLYDQNSDQRMEFDEYRGTPAVPLAQRQIPDPVIDRVRQQLST----------------------FPKADQNNDSQLSIEELKAAFP-ELADQHNNKPVARDDLQRLLDIAYGVRTLDGQLLREPSGRVVNWMLFTHLDTDHSGQLSAGELKPQFKQDQQ 628
BLAST of mRNA_M-pyrifera_M_contig116740.3468.1 vs. uniprot
Match: A0A518IBJ9_9PLAN (Transaldolase/EF-hand domain-containing protein n=2 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518IBJ9_9PLAN) HSP 1 Score: 142 bits (359), Expect = 5.190e-36 Identity = 87/186 (46.77%), Postives = 115/186 (61.83%), Query Frame = 1
Query: 4 DKVLDQAEYLARLKPEHQKVGRLEFLLGDFDQDQKMSFQEYFSTPAVPLGQRRIPDPVIDRVQQLLAMQEKRFRAQKDDIEKQSASEAPETPEKDGSSETKKRLNRVTQLPPG----SVFEWNGNRN--FSQEKSKLFLEIAYAVRTPQGVLLREPSGRVVNLRLFRHLDTDRNGRLSAGELLPQL 543
D VL QAEYL L+PEHQK+G+ +FLL D +Q+Q M + EY TP++PL +R IPDPV DRVQQ L ++RF QK D+ + SE + + R T PG S +W+ +++ SQ+ +L LEIA+ VR P+G LLREP GRVVN LFRHLD D N +LS EL P++
Sbjct: 71 DDVLTQAEYLKTLRPEHQKIGKRDFLLFDRNQNQLMEYDEYLCTPSIPLEERLIPDPVTDRVQQFLNALQQRF--QKGDLNADAQL-----------SEQEFQQARFTATLPGLALTSFTDWDRDQDGQVSQQDIQLLLEIAFGVRAPEGQLLREPGGRVVNWMLFRHLDEDHNNQLSVKELKPRI 243
BLAST of mRNA_M-pyrifera_M_contig116740.3468.1 vs. uniprot
Match: A0A2E2C773_9PLAN (Uncharacterized protein n=4 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2C773_9PLAN) HSP 1 Score: 62.8 bits (151), Expect = 3.650e-8 Identity = 58/184 (31.52%), Postives = 88/184 (47.83%), Query Frame = 1
Query: 4 DKVLDQAEYLARLKPEHQKVGRLEFLLGDFDQDQKMSFQEYFSTP-AVPLGQRR-IPDPVIDRVQQLLAMQEKRFRAQKDDIEKQSASEAPETPEKDGSSETKKRLNRVTQLPPGS-----VFEWNGNRNFSQEKSKLFLEIAYAVRTPQGVLLREPSGRVVNLRLFRHLDTDRNGRLSAGELL 534
D L + EYLA++ P R +F L DFDQ+ K+S QEY + P +P+ QR +PDPV D L A ++ ++ + S + D E K LPP S V++ + N +++++ +EIAY +R G LR +GRV+ H D D + +LS E L
Sbjct: 753 DGSLTEKEYLAKVAPASTAAARRDFHLVDFDQNGKLSKQEYRALPDLLPIEQRGPVPDPVAD----LAATAQRTWQQIFKTADSNSDGQLTYWEWPDDELEQK--------LPPLSKVAFRVWDADQNGKVNRKEADRLIEIAYGMRHITGAPLRSSNGRVMYHSYISHADKDGDHQLSVNEFL 924
BLAST of mRNA_M-pyrifera_M_contig116740.3468.1 vs. uniprot
Match: UPI00198E0333 (PD40 domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=UPI00198E0333) HSP 1 Score: 56.2 bits (134), Expect = 5.620e-6 Identity = 28/55 (50.91%), Postives = 40/55 (72.73%), Query Frame = 1
Query: 352 EWNGNRN--FSQEKSKLFLEIAYAVRTPQGVLLREPSGRVVNLRLFRHLDTDRNG 510
+W+ +R+ S++ +K L+IA+ VRTP+G LLREP+GRVV+ RLFR DR G
Sbjct: 140 DWDLDRDQKVSRDDAKQLLDIAFGVRTPEGHLLREPTGRVVDWRLFRGFTLDREG 194 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116740.3468.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig116740.3468.1 >prot_M-pyrifera_M_contig116740.3468.1 ID=prot_M-pyrifera_M_contig116740.3468.1|Name=mRNA_M-pyrifera_M_contig116740.3468.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=186bp GDKVLDQAEYLARLKPEHQKVGRLEFLLGDFDQDQKMSFQEYFSTPAVPLback to top mRNA from alignment at M-pyrifera_M_contig116740:1..558+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig116740.3468.1 ID=mRNA_M-pyrifera_M_contig116740.3468.1|Name=mRNA_M-pyrifera_M_contig116740.3468.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=558bp|location=Sequence derived from alignment at M-pyrifera_M_contig116740:1..558+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig116740:1..558+ >mRNA_M-pyrifera_M_contig116740.3468.1 ID=mRNA_M-pyrifera_M_contig116740.3468.1|Name=mRNA_M-pyrifera_M_contig116740.3468.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1116bp|location=Sequence derived from alignment at M-pyrifera_M_contig116740:1..558+ (Macrocystis pyrifera P11B4 male)back to top |