mRNA_M-pyrifera_M_contig116683.3454.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig116683.3454.1 vs. uniprot
Match: A0A1U7TAD6_CARSF (E3 ubiquitin-protein ligase SHPRH-like n=1 Tax=Carlito syrichta TaxID=1868482 RepID=A0A1U7TAD6_CARSF) HSP 1 Score: 137 bits (345), Expect = 2.780e-38 Identity = 76/160 (47.50%), Postives = 101/160 (63.12%), Query Frame = 1
Query: 7 PGGKIIIFSQWELVLRIIAKALKANNVHHAAMLSSRQANQRALSTFKTLPGVRVLLLPVKSGSNGLNLIEATHVFLAEPLLNPAAEAQALGRIHRIGQTRPTFVHRYVVQNTVEESI-AKLMAKKKGLMNVSLEEGDVSGWGAQKSERDVLTANDLWECF 483
PG K ++FS W+ VL II+KAL NN+ A +S + Q LS FK P + +LLLP+ GSNGL +IEATHV L EP+LNPA E QA+GR+HRIGQT+PT VHR++++ T+EE + A L ++ N S + SE VLT DL + F
Sbjct: 8 PGAKALVFSTWQDVLDIISKALTDNNIEFA-QISRVKTFQENLSAFKHDPEINILLLPLHIGSNGLTIIEATHVLLVEPILNPAHELQAIGRVHRIGQTKPTIVHRFLIKATIEERMQAMLKTAERSHTNSS----------GKHSEASVLTVADLADLF 156
BLAST of mRNA_M-pyrifera_M_contig116683.3454.1 vs. uniprot
Match: A0A2D4LHG9_9SAUR (Helicase C-terminal domain-containing protein (Fragment) n=2 Tax=Micrurus TaxID=8634 RepID=A0A2D4LHG9_9SAUR) HSP 1 Score: 139 bits (351), Expect = 3.120e-38 Identity = 77/160 (48.12%), Postives = 104/160 (65.00%), Query Frame = 1
Query: 7 PGGKIIIFSQWELVLRIIAKALKANNVHHAAMLSSRQANQRALSTFKTLPGVRVLLLPVKSGSNGLNLIEATHVFLAEPLLNPAAEAQALGRIHRIGQTRPTFVHRYVVQNTVEESIAKLMAK-KKGLMNVSLEEGDVSGWGAQKSERDVLTANDLWECF 483
PG K ++FS W+ VL IIAKAL NN+ A ++ Q Q LS FK P + +LLLP+ +GSNGLN+IEAT V L EP+LNPA E QA+GR+HRIGQT+PT VHR++++ T+EE + +M ++ N SL ++SE VLT DL + F
Sbjct: 86 PGAKALVFSTWQDVLDIIAKALHDNNMDFA-QINGIQKFQENLSAFKYDPKINILLLPLHTGSNGLNIIEATQVLLVEPILNPAHELQAIGRVHRIGQTKPTIVHRFLIKATIEERMQTMMKTVERSHSNSSL----------KQSEASVLTVADLADLF 234
BLAST of mRNA_M-pyrifera_M_contig116683.3454.1 vs. uniprot
Match: F0ZEC0_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZEC0_DICPU) HSP 1 Score: 146 bits (368), Expect = 1.660e-37 Identity = 67/152 (44.08%), Postives = 109/152 (71.71%), Query Frame = 1
Query: 16 KIIIFSQWELVLRIIAKALKANNVHHAAMLSSRQANQRALSTFKTLPGVRVLLLPVKSGSNGLNLIEATHVFLAEPLLNPAAEAQALGRIHRIGQTRPTFVHRYVVQNTVEESIAKLMAKKKGLMNVSLEEGDVSGWGAQKSERDVLTANDL 471
K+IIFSQW +L II++ALK N++ A + + + A++ F+ P + VLLLP++ G++GLNLIEATHVF+ EP+LNP+ EAQA+ R+HR GQ++ TFVHR++++NT+EE +A++ KK+ ++ L + K+++D+L+ ND+
Sbjct: 1594 KVIIFSQWMDLLEIISRALKENDIEFAKISKKPNSFESAINQFRKNPNINVLLLPIQRGASGLNLIEATHVFIVEPILNPSVEAQAINRVHRFGQSKETFVHRFIIKNTIEEKVAQMNKKKEKELDWKL--------ASNKNDKDLLSKNDI 1737
BLAST of mRNA_M-pyrifera_M_contig116683.3454.1 vs. uniprot
Match: S4RLY8_PETMA (Uncharacterized protein n=1 Tax=Petromyzon marinus TaxID=7757 RepID=S4RLY8_PETMA) HSP 1 Score: 137 bits (345), Expect = 2.550e-37 Identity = 67/121 (55.37%), Postives = 87/121 (71.90%), Query Frame = 1
Query: 7 PGGKIIIFSQWELVLRIIAKALKANNVHHAAMLSSRQANQRALSTFKTLPGVRVLLLPVKSGSNGLNLIEATHVFLAEPLLNPAAEAQALGRIHRIGQTRPTFVHRYVVQNTVEESIAKLM 369
P K ++FS W+ VL II KALK N ++ A ++ Q LS FK PG VLLLP+ +GSNGLN+IEATHV L EP+LNPA E QA+GR+HRIGQTRPT VHR+ V++T+EE + ++
Sbjct: 109 PEAKSLVFSTWQDVLDIIGKALKKNGIYFA-QINGIHRFQENLSAFKHDPGTNVLLLPLHTGSNGLNIIEATHVILVEPILNPATEMQAIGRVHRIGQTRPTVVHRFAVKSTIEEKMVAML 228
BLAST of mRNA_M-pyrifera_M_contig116683.3454.1 vs. uniprot
Match: K9KFN5_HORSE (E3 ubiquitin-protein ligase SHPRH-like protein (Fragment) n=1 Tax=Equus caballus TaxID=9796 RepID=K9KFN5_HORSE) HSP 1 Score: 136 bits (343), Expect = 4.580e-37 Identity = 73/159 (45.91%), Postives = 101/159 (63.52%), Query Frame = 1
Query: 7 PGGKIIIFSQWELVLRIIAKALKANNVHHAAMLSSRQANQRALSTFKTLPGVRVLLLPVKSGSNGLNLIEATHVFLAEPLLNPAAEAQALGRIHRIGQTRPTFVHRYVVQNTVEESIAKLMAKKKGLMNVSLEEGDVSGWGAQKSERDVLTANDLWECF 483
PG K ++FS W+ VL II+KAL N++ A +S + Q LS FK P + +LLLP+ +GSNGL +IEATHV L EP+LNPA E QA+GR+HRIGQT+PT VHR++++ T+EE + ++ E + A+ SE VLT DL + F
Sbjct: 83 PGAKALVFSTWQDVLDIISKALTDNSMEFA-QISRVKTFQENLSAFKYDPQINILLLPLHTGSNGLTIIEATHVLLVEPILNPAHELQAIGRVHRIGQTKPTIVHRFLIKATIEERMQAMLKTA---------EWSHTNSSAKHSEASVLTVADLADLF 231
BLAST of mRNA_M-pyrifera_M_contig116683.3454.1 vs. uniprot
Match: A0A7S0HP42_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HP42_9CRYP) HSP 1 Score: 140 bits (353), Expect = 5.090e-37 Identity = 79/164 (48.17%), Postives = 115/164 (70.12%), Query Frame = 1
Query: 1 LTPGGKIIIFSQWELVLRIIAKALKANNVHHAAMLSSRQANQRALSTFKTLPGVRVLLLPVKSGSNGLNLIEATHVFLAEPLLNPAAEAQALGRIHRIGQTRPTFVHRYVVQNTVEESIAKLMAKKKGLMNVSLEEGDVSGWG-AQKSER--DVLTANDLWECF 483
L G K I+FS+WE +L+II+ AL+ N++ + +Q + + L+ FK+ P V+VLLLP +SGSNGLN+ EATHVFL EPLLN A EAQA+GR+HRIGQT+ T VHR++VQ++VEE + + +K +EEG+ S + AQ++ + DV+T +D+ E F
Sbjct: 151 LKEGDKAIVFSEWEDMLKIISHALEHNDIPYQRCEGGKQFS-KGLARFKSDPRVKVLLLPFRSGSNGLNVTEATHVFLIEPLLNVAVEAQAIGRVHRIGQTKETVVHRFIVQDSVEERVHAIGRRK----IQDMEEGNDSTFHQAQEAAKKHDVVTIDDVQELF 309
BLAST of mRNA_M-pyrifera_M_contig116683.3454.1 vs. uniprot
Match: A0A7R8CCF7_LEPSM (SHPRH n=1 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A7R8CCF7_LEPSM) HSP 1 Score: 142 bits (359), Expect = 1.050e-36 Identity = 74/159 (46.54%), Postives = 106/159 (66.67%), Query Frame = 1
Query: 7 PGGKIIIFSQWELVLRIIAKALKANNVHHAAMLSSRQANQRALSTFKTLPGVRVLLLPVKSGSNGLNLIEATHVFLAEPLLNPAAEAQALGRIHRIGQTRPTFVHRYVVQNTVEESIAKLMAKKKGLMNVSLEEGDVSGWGAQKSERDVLTANDLWECF 483
P K +IFS W +L IIA AL NN+ +A++ S + +R L FK V+VLLLP+ SG+NGLNLIEA+HVFL EP+LNPA E QA+GR+HRIGQT+PT VHR+++++TVEE + K+++ + D + G+ +E +++T DL F
Sbjct: 454 PDAKTLIFSSWADLLNIIAVALLENNIAYASLYSQGKF-KRNLLKFKNRKDVKVLLLPISSGANGLNLIEASHVFLVEPILNPAQELQAIGRVHRIGQTKPTVVHRFLIRSTVEERMHKILSSY---------QRDEAKQGSHSTEENLITIKDLKNIF 602
BLAST of mRNA_M-pyrifera_M_contig116683.3454.1 vs. uniprot
Match: A0A7S4D6P5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6P5_HETAK) HSP 1 Score: 132 bits (333), Expect = 2.290e-36 Identity = 65/129 (50.39%), Postives = 89/129 (68.99%), Query Frame = 1
Query: 1 LTPGGKIIIFSQWELVLRIIAKALKANNVHHAAMLSSRQAN--QRALSTFKTLPGVRVLLLPVKSGSNGLNLIEATHVFLAEPLLNPAAEAQALGRIHRIGQTRPTFVHRYVVQNTVEESIAKLMAKKK 381
L PG K ++FSQW+ +L I A AL+ N V H + + N + L F+T G+ LLL ++ G+ GL L EATHVFL EP+LNPA EAQA+ R+HR+GQTRPT VHRY+VQ+T+EE I +L + ++
Sbjct: 25 LAPGEKALVFSQWDELLAIAAAALRRNGVGHERLRGGGRRNKFEERLRNFRTGEGITCLLLTLRQGAEGLTLTEATHVFLLEPVLNPALEAQAVNRVHRVGQTRPTRVHRYIVQDTIEERIEQLSSARR 153
BLAST of mRNA_M-pyrifera_M_contig116683.3454.1 vs. uniprot
Match: UPI000521821A (E3 ubiquitin-protein ligase SHPRH-like n=1 Tax=Apaloderma vittatum TaxID=57397 RepID=UPI000521821A) HSP 1 Score: 135 bits (340), Expect = 2.510e-36 Identity = 72/159 (45.28%), Postives = 104/159 (65.41%), Query Frame = 1
Query: 7 PGGKIIIFSQWELVLRIIAKALKANNVHHAAMLSSRQANQRALSTFKTLPGVRVLLLPVKSGSNGLNLIEATHVFLAEPLLNPAAEAQALGRIHRIGQTRPTFVHRYVVQNTVEESIAKLMAKKKGLMNVSLEEGDVSGWGAQKSERDVLTANDLWECF 483
PG K ++FS W+ +L IIAKAL NN+ + ++ Q LS FK P + +LLLP+ +GSNGLN+IEATHV L EP+LNPA E QA+GR+HRIGQT+PT VHR++++ T+EE + ++ +++S + ++SE VLT DL + F
Sbjct: 109 PGAKSLVFSTWQDMLDIIAKALYDNNMIFS-QINGISKFQENLSAFKYDPNINILLLPLHTGSNGLNIIEATHVLLVEPILNPAHELQAIGRVHRIGQTKPTIVHRFLIKATIEERLQTMLQT----LDISHTSSSM-----KESETSVLTVADLDDLF 257
BLAST of mRNA_M-pyrifera_M_contig116683.3454.1 vs. uniprot
Match: A0A0K2VBW6_LEPSM (SNF2 histone linker PHD RING helicase, E3 ubiquitin protein ligase [Chrysemys picta] n=1 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A0K2VBW6_LEPSM) HSP 1 Score: 142 bits (359), Expect = 2.680e-36 Identity = 74/159 (46.54%), Postives = 106/159 (66.67%), Query Frame = 1
Query: 7 PGGKIIIFSQWELVLRIIAKALKANNVHHAAMLSSRQANQRALSTFKTLPGVRVLLLPVKSGSNGLNLIEATHVFLAEPLLNPAAEAQALGRIHRIGQTRPTFVHRYVVQNTVEESIAKLMAKKKGLMNVSLEEGDVSGWGAQKSERDVLTANDLWECF 483
P K +IFS W +L IIA AL NN+ +A++ S + +R L FK V+VLLLP+ SG+NGLNLIEA+HVFL EP+LNPA E QA+GR+HRIGQT+PT VHR+++++TVEE + K+++ + D + G+ +E +++T DL F
Sbjct: 1504 PDAKTLIFSSWADLLNIIAVALLENNIAYASLYSQGKF-KRNLLKFKNRKDVKVLLLPISSGANGLNLIEASHVFLVEPILNPAQELQAIGRVHRIGQTKPTVVHRFLIRSTVEERMHKILSSY---------QRDEAKQGSHSTEENLITIKDLKNIF 1652 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116683.3454.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig116683.3454.1 >prot_M-pyrifera_M_contig116683.3454.1 ID=prot_M-pyrifera_M_contig116683.3454.1|Name=mRNA_M-pyrifera_M_contig116683.3454.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=165bp LTPGGKIIIFSQWELVLRIIAKALKANNVHHAAMLSSRQANQRALSTFKTback to top mRNA from alignment at M-pyrifera_M_contig116683:11..505- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig116683.3454.1 ID=mRNA_M-pyrifera_M_contig116683.3454.1|Name=mRNA_M-pyrifera_M_contig116683.3454.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=495bp|location=Sequence derived from alignment at M-pyrifera_M_contig116683:11..505- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig116683:11..505- >mRNA_M-pyrifera_M_contig116683.3454.1 ID=mRNA_M-pyrifera_M_contig116683.3454.1|Name=mRNA_M-pyrifera_M_contig116683.3454.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=990bp|location=Sequence derived from alignment at M-pyrifera_M_contig116683:11..505- (Macrocystis pyrifera P11B4 male)back to top |