mRNA_M-pyrifera_M_contig116573.3447.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig116573.3447.1 vs. uniprot
Match: A0A3D4UM04_9BACT (Uncharacterized protein n=2 Tax=Phycisphaerae TaxID=666505 RepID=A0A3D4UM04_9BACT) HSP 1 Score: 125 bits (313), Expect = 1.430e-31 Identity = 70/172 (40.70%), Postives = 98/172 (56.98%), Query Frame = 1
Query: 1 QTSFDIVAAAYSADQKRGGIDTLAQFNSSFGDGAGHYRNVRLPLPAGSPFVKVRRYTEVVYPSSKVHGYDTHQRHSGR-PHIYYAIPTAKLPVMMFDGSVSVRQTQDANPGFQPNDPTSAEPTVFRYMPFSIEGDAVNPEGDEVTGYYKWTRGGLRGIDFGGSEINTGQISP 513
++S++ YS DQ G + L Q N+ + L F+K R++TEV + S K + +DT+ RH Y P A+ P++ FDGSVSVR ++NPGF+P DPT+AEP++ + + + EG GYY+WTRGGLRGIDFGGSEI+TGQ P
Sbjct: 181 ESSYETSVVTYSVDQAVGSLQPLDQHNNPY-----------LQFDRNPLFLKSRKFTEVRFTSGKAYMFDTYDRHYAELADTIYNEPNARQPILFFDGSVSVRDADESNPGFRPRDPTNAEPSLVK--------PSSSSEG--YPGYYRWTRGGLRGIDFGGSEISTGQPRP 331
BLAST of mRNA_M-pyrifera_M_contig116573.3447.1 vs. uniprot
Match: A0A7Y5VZG6_9BACT (Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Y5VZG6_9BACT) HSP 1 Score: 124 bits (312), Expect = 2.470e-31 Identity = 68/170 (40.00%), Postives = 100/170 (58.82%), Query Frame = 1
Query: 4 TSFDIVAAAYSADQKRGGIDTLAQFNSSFGDGAGHYRNVRLPLPAGSPFVKVRRYTEVVYPSSKVHGYDTHQRHSGRPHIYYAIPTAKLPVMMFDGSVSVRQTQDANPGFQPNDPTSAEPTVFRYMPFSIEGDAVNPEG---DEVTGYYKWTRGGLRGIDFGGSEINTGQ 504
+++ IV + DQ+ G T Q+ + N+ L GS + RR EVVYPS KV ++ + RH P +++A P A++P++ FD SV R+T +ANPGF PN P + PT+F Y P + + G + VTGYY+WTRGGL+GID+GG+E++TGQ
Sbjct: 183 STYQIVPQTWCPDQRNGSQTTYIQYPAD--------HNLFL---VGSAGLAKRRAAEVVYPSGKVLVFEFYARHEKTP-LFFAYPDARVPLLFFDASVRTRKTGEANPGFMPNAPKNKNPTLFDYSPLILGFEPPTQSGANKETVTGYYRWTRGGLKGIDYGGTEVDTGQ 340
BLAST of mRNA_M-pyrifera_M_contig116573.3447.1 vs. uniprot
Match: A0A6N2EKC5_9BACT (Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A6N2EKC5_9BACT) HSP 1 Score: 122 bits (306), Expect = 2.090e-30 Identity = 63/117 (53.85%), Postives = 81/117 (69.23%), Query Frame = 1
Query: 163 RYTEVVYPSSKVHGYDTHQRHSGRPHIYYAIPTAKLPVMMFDGSVSVRQTQDANPGFQPNDPTSAEPTVFRYM---PFSIEGDAVNPEGDEVTGYYKWTRGGLRGIDFGGSEINTGQ 504
R ++V +PS+KV +DT QR+ G+ +IY+A P A+LPV MFDGSV V +T+ ANPG+ P PT+A PT F Y P+ + +P V GYY+WTRGGLRGIDF GSEI TGQ
Sbjct: 231 RASDVAFPSNKVLLHDTEQRYFGKENIYFAFPDARLPVTMFDGSVRVERTEGANPGWDPTRPTTALPTRFNYSDPDPWLAQPRPSDPA--RVVGYYRWTRGGLRGIDFNGSEIGTGQ 345
BLAST of mRNA_M-pyrifera_M_contig116573.3447.1 vs. uniprot
Match: A0A3M2BII0_9BACT (Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M2BII0_9BACT) HSP 1 Score: 121 bits (304), Expect = 3.550e-30 Identity = 60/130 (46.15%), Postives = 85/130 (65.38%), Query Frame = 1
Query: 130 LPAGSPFVKVRRYTEVVYPSSKVHGYDTHQRHSGRPHIYYAIPTAKLPVMMFDGSVSVRQTQDANPGFQPNDPTSAEPTVFRYMP--FSIEGDAV--NPEGDEVTGYYKWTRGGLRGIDFGGSEINTGQI 507
+ GS + R+ +V +P KV ++ H RH+ R I+YA A+ +MFDGSV+ +T DANPGF+PN P+S +PT+F Y P S E + + +GD VTGYY+WTRGGL+G D+G EI+TGQ+
Sbjct: 210 MSVGSKPLGRRKMGQVSFPGQKVFMFEFHDRHTNRNGIFYAYEVAQSSQLMFDGSVNSNKTGDANPGFKPNQPSSRQPTIFIYKPTVLSFEPEPLYDRQQGDRVTGYYRWTRGGLKGADYGSKEIDTGQM 339
BLAST of mRNA_M-pyrifera_M_contig116573.3447.1 vs. uniprot
Match: A0A2A4RPD3_9BACT (Uncharacterized protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A2A4RPD3_9BACT) HSP 1 Score: 120 bits (300), Expect = 1.160e-29 Identity = 71/169 (42.01%), Postives = 100/169 (59.17%), Query Frame = 1
Query: 1 QTSFDIVAAAYSADQKRGGIDTLAQFNSSFGDGAGHYRNVRLPLPAGSPFVKVRRYTEVVYPSSKVHGYDTHQRH-SGRPHIYYAIPTAKLPVMMFDGSVSVRQTQDANPGFQPNDPTSAEPTVFRYMPFSIEGDAVNPEGDEVTGYYKWTRGGLRGIDFGGSEINTGQ 504
++S++ YS+D R + + Q +S+G +R++ FV RR+T+V + S K + +DT+ RH + P Y P +K P++ FDGSVSVR T+DAN GFQP DP++ EPT+ I+ +A E GYY+WTRGGL GIDFGGSE NTGQ
Sbjct: 182 ESSYETSIVTYSSDSSRSTVSPIDQHGASWGV---FHRSLN--------FVVHRRFTQVRFTSGKAYMFDTYDRHFASVPDTLYFEPDSKQPILFFDGSVSVRATKDANHGFQPLDPSNPEPTM-------IKKEARGTE--SFPGYYRWTRGGLEGIDFGGSEANTGQ 330
BLAST of mRNA_M-pyrifera_M_contig116573.3447.1 vs. uniprot
Match: A0A3M2BLU3_9BACT (Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M2BLU3_9BACT) HSP 1 Score: 116 bits (290), Expect = 3.580e-28 Identity = 63/164 (38.41%), Postives = 94/164 (57.32%), Query Frame = 1
Query: 1 QTSFDIVAAAYSADQKRGGIDTLAQFNSSFGDGAGHYRNVRLPLPAGSPFVKVRRYTEVVYPSSKVHGYDTHQRHSGRPHIYYAIPTAKLPVMMFDGSVSVRQTQDANPGFQPNDPTSAEPTVFRYMPFSIEGDAVNPEGDEVTGYYKWTRGGLRGIDFGGSEI 492
++S++ A +S DQ G +D ++Q G+G + L + RR++EVV+PS K H +D++ RH+ +YA + P++ FDGSV + T D+NPGF+P DP S EPT+ R + I G+ + E G+Y+WTRGGL GIDFG EI
Sbjct: 184 ESSYETAAVTHSVDQAGGALDPISQH----GEGIWTFSRPNRYLVS-------RRWSEVVFPSGKAHMFDSYDRHASNEVRFYADERSVQPILFFDGSVRISATADSNPGFRPRDPASPEPTIMRLV---IPGEGTS----EYVGFYRWTRGGLGGIDFGSGEI 329
BLAST of mRNA_M-pyrifera_M_contig116573.3447.1 vs. uniprot
Match: UPI001986BBD6 (Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=UPI001986BBD6) HSP 1 Score: 114 bits (284), Expect = 4.060e-27 Identity = 65/167 (38.92%), Postives = 91/167 (54.49%), Query Frame = 1
Query: 4 TSFDIVAAAYSADQKRGGIDTLAQFNSSFGDGAGHYRNVRLPLPAGSPFVKVRRYTEVVYPSSKVHGYDTHQRHSGRPHIYYAIPTAKLPVMMFDGSVSVRQTQDANPGFQPNDPTSAEPTVFRYMPFSIEGDAVNPEGDEVTGYYKWTRGGLRGIDFGGSEINTGQ 504
+S+ V A +S DQ RG + T+ Q G H +P +P R+Y +V YPS KV +D+ QRH G+ +YA K P+ FD SV T+D+N GF+P+ PT+ PT+ Y P E A+N + G Y+WTRGGLRG+D+GG + TG
Sbjct: 197 SSYRTVIAGFSPDQNRGAVPTVTQ-------GPTHATYF---VPDITPMGD-RKYADVSYPSQKVWFFDSFQRHYGKIQPFYAYSICKQPLGFFDASVRNMNTRDSNRGFRPDAPTADAPTLINYTPSPFESPAINEP--NIAGRYQWTRGGLRGVDYGGDAVRTGN 350
BLAST of mRNA_M-pyrifera_M_contig116573.3447.1 vs. uniprot
Match: A0A7Y5W8L3_9BACT (Type II secretion system protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Y5W8L3_9BACT) HSP 1 Score: 112 bits (281), Expect = 1.010e-26 Identity = 57/118 (48.31%), Postives = 78/118 (66.10%), Query Frame = 1
Query: 160 RRYTEVVYPSSKVHGYDTHQRHSGRPHIYYAIPTAKLPVMMFDGSVSVRQTQDANPGFQPNDPTSAEPTVFRYMPFSIE-----GDAVNPEGDEVTGYYKWTRGGLRGIDFGGSEINT 498
RR +V +PS KVH ++T RHSG+ ++YA P AK P++ FD SV +R+T DAN GF P+ P + PT FRY+P E G P D + GY++WTRGGL+GID+GG+E+ T
Sbjct: 232 RRMGDVSFPSQKVHHHETFARHSGKRSLFYAYPEAKSPLLFFDQSVVMRRTGDANKGFDPSQPFRSFPTRFRYIPGLWEVPTPSGGFYPPFEDLLDGYFRWTRGGLQGIDYGGAELIT 349
BLAST of mRNA_M-pyrifera_M_contig116573.3447.1 vs. uniprot
Match: A0A5M4D8C3_9CYAN (Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Cyanobacteria bacterium CYA TaxID=2484221 RepID=A0A5M4D8C3_9CYAN) HSP 1 Score: 110 bits (274), Expect = 7.990e-26 Identity = 63/172 (36.63%), Postives = 96/172 (55.81%), Query Frame = 1
Query: 4 TSFDIVAAAYSADQKRGGIDTLAQFNSSFGDGAGHYRNVRLPLPAGSPFVKVRRYTEVVYPSSKVHGYDTHQRHSGRPHIYYAIPTAKLPVMMFDGSVSVRQTQDANPGFQPNDPTSAEPTVFRYMPFSIEGDAV----NPEGDEVTGYYKWTRGGLRGIDFGGSEINTGQI 507
+++ V A++S D RG T++Q +G Y + G+ + RR + V +P KV ++ H RH+ + I+YA A+ ++FDGSV R+T DAN GF+PN P + F Y P + + GD V GYY+WTRGGL+G+D+GG++INTGQ+
Sbjct: 175 STYQAVPASWSEDTGRGHDTTVSQ--------SGDYEL----MSVGTKPLGRRRMSHVSFPGQKVFLFEFHDRHTNKNGIFYAYEIARSSQLLFDGSVDSRKTGDANKGFRPNVPHLPGASTFYYRPRELTFEPAPLYDTVRGDLVKGYYRWTRGGLKGVDYGGTDINTGQM 334
BLAST of mRNA_M-pyrifera_M_contig116573.3447.1 vs. uniprot
Match: A0A5M4D1V5_9CYAN (Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Cyanobacteria bacterium CYA TaxID=2484221 RepID=A0A5M4D1V5_9CYAN) HSP 1 Score: 109 bits (273), Expect = 9.960e-26 Identity = 60/168 (35.71%), Postives = 96/168 (57.14%), Query Frame = 1
Query: 1 QTSFDIVAAAYSADQKRGGIDTLAQFNSSFGDGAGHYRNVRLPLPAGSPFVKVRRYTEVVYPSSKVHGYDTHQRHSGRPHIYYAIPTAKLPVMMFDGSVSVRQTQDANPGFQPNDPTSAEPTVFRYMPFSIEGDAVNPEGDEVTGYYKWTRGGLRGIDFGGSEINTGQ 504
+++++ +A YS D G ++ L+Q S + ++ ++ ++ RR +EVV+PS K H +D+ RH+G ++YA A P++ FDGSV +T ++N GF+P +P S EP+V M G E G+++WTRGGLRGID+G EI+TGQ
Sbjct: 179 ESTYETIAQTYSVDMVGGRLEPLSQHGRSIWE----FQRAQI-------YLATRRASEVVFPSGKAHMFDSFGRHNGGEVLFYADERASQPILFFDGSVRTEETSESNRGFRPREPGSPEPSV---MTLVTPGVGTT----EYVGHHRWTRGGLRGIDWGAGEISTGQ 328 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116573.3447.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig116573.3447.1 >prot_M-pyrifera_M_contig116573.3447.1 ID=prot_M-pyrifera_M_contig116573.3447.1|Name=mRNA_M-pyrifera_M_contig116573.3447.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=172bp QTSFDIVAAAYSADQKRGGIDTLAQFNSSFGDGAGHYRNVRLPLPAGSPFback to top mRNA from alignment at M-pyrifera_M_contig116573:2..517+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig116573.3447.1 ID=mRNA_M-pyrifera_M_contig116573.3447.1|Name=mRNA_M-pyrifera_M_contig116573.3447.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=516bp|location=Sequence derived from alignment at M-pyrifera_M_contig116573:2..517+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig116573:2..517+ >mRNA_M-pyrifera_M_contig116573.3447.1 ID=mRNA_M-pyrifera_M_contig116573.3447.1|Name=mRNA_M-pyrifera_M_contig116573.3447.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1032bp|location=Sequence derived from alignment at M-pyrifera_M_contig116573:2..517+ (Macrocystis pyrifera P11B4 male)back to top |