mRNA_M-pyrifera_M_contig116561.3446.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig116561.3446.1 vs. uniprot
Match: A0A7R8X5W6_9CRUS (RCR-type E3 ubiquitin transferase n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R8X5W6_9CRUS) HSP 1 Score: 70.9 bits (172), Expect = 5.790e-12 Identity = 41/109 (37.61%), Postives = 56/109 (51.38%), Query Frame = 1
Query: 7 DLTREIEIKVPSNEERRPMLTDGSTETFWESGIDDEDRNKEIVVTLGPSGDTAIAVAVHLDNERAADKGCSKLVLKSAPPGAEQEAVLTATPKSKYAGWAMLRIPESRH 333
DLT E+K S LTDGSTETFWESG +D+D+ K I++TL + V VH+DN R S +V+KS + V +++ GW IP+ H
Sbjct: 3218 DLTSSCELKCSSRPSMIGSLTDGSTETFWESGEEDKDKIKHILITLSHPNYSIQMVYVHVDNGRDIGNKVSHIVIKSGVSTDNLQKVSQQELDTRFIGWVSASIPDPGH 3326
BLAST of mRNA_M-pyrifera_M_contig116561.3446.1 vs. uniprot
Match: UPI0018D9334E (E3 ubiquitin-protein ligase MYCBP2-like isoform X1 n=5 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D9334E) HSP 1 Score: 65.9 bits (159), Expect = 3.290e-10 Identity = 37/104 (35.58%), Postives = 54/104 (51.92%), Query Frame = 1
Query: 7 DLTREIEIKVPSNEERRPMLTDGSTETFWESGIDDEDRNKEIVVTLGPSGDTAIAVAVHLDNERAADKGCSKLVLKSAPPGAEQEAVLTATPKSKYAGWAMLRI 318
D+T E++V S P LTDGSTETFWESG +D +R K I VT G VAVH+DN R + + + P + L ++ ++++ GW +
Sbjct: 2572 DVTNATELQVSSRAAMLPSLTDGSTETFWESGDEDRNRTKSITVTCN-EGLVPRMVAVHVDNSRDLGNKVTGMTFFTGPNPDSLQRTLNSSMEARHVGWVTCNL 2674
BLAST of mRNA_M-pyrifera_M_contig116561.3446.1 vs. uniprot
Match: A0A1B6DGK3_9HEMI (DOC domain-containing protein (Fragment) n=1 Tax=Clastoptera arizonana TaxID=38151 RepID=A0A1B6DGK3_9HEMI) HSP 1 Score: 65.1 bits (157), Expect = 6.150e-10 Identity = 38/111 (34.23%), Postives = 56/111 (50.45%), Query Frame = 1
Query: 1 MVDLTREIEIKVPSNEERRPMLTDGSTETFWESGIDDEDRNKEIVVTLGPSGDTAIAVAVHLDNERAADKGCSKLVLKSAPPGAEQEAVLTATPKSKYAGWAMLRIPESRH 333
+ DL+ IEIK S + LTD STETFWESG +D ++ K +++T P+ + V +H+DN R S + S P E + T +S+ GW I + H
Sbjct: 3624 LYDLSSGIEIKASSRQAMVGSLTDNSTETFWESGDEDRNKTKTLIITC-PANASPHVVYIHIDNCRDLANKVSNVTFLSGPNTEELYKIRTVEVESRATGWFNCTITDGNH 3733
BLAST of mRNA_M-pyrifera_M_contig116561.3446.1 vs. uniprot
Match: E9H1S2_DAPPU (RCR-type E3 ubiquitin transferase n=10 Tax=Daphnia TaxID=6668 RepID=E9H1S2_DAPPU) HSP 1 Score: 65.1 bits (157), Expect = 6.160e-10 Identity = 40/112 (35.71%), Postives = 61/112 (54.46%), Query Frame = 1
Query: 1 MVDLTREIEIKVPSNEERRPMLTDGSTETFWESGIDDEDRNKEIVVTLGPSGDTA----IAVAVHLDNERAADKGCSKLVLKSAPPGAEQEAVLTATPKSKYAGWAMLRIPE 324
+ ++T I+IKV S LTDGSTETFWESG DEDR K ++T+ +TA V +++DN R S + K+ P G E + V +++++GW +P+
Sbjct: 3733 LTEVTEGIDIKVSSRTAMVNSLTDGSTETFWESG--DEDRGKMKLITIQVCPETAGFQPRIVCLYVDNSRDMGNKVSGVTFKAGPNGEELQIVDVLEVETRFSGWLHTSLPQ 3842
BLAST of mRNA_M-pyrifera_M_contig116561.3446.1 vs. uniprot
Match: A0A7M7NMX2_STRPU (RCR-type E3 ubiquitin transferase n=5 Tax=Echinacea TaxID=7674 RepID=A0A7M7NMX2_STRPU) HSP 1 Score: 63.9 bits (154), Expect = 1.560e-9 Identity = 36/99 (36.36%), Postives = 53/99 (53.54%), Query Frame = 1
Query: 7 DLTREIEIKVPSNEERRPMLTDGSTETFWESGIDDEDRNKEIVVTLGPSGDTAIAVAVHLDNERAADKGCSKLVLKSAPPGAEQEAVLTATPKSKYAGW 303
D+T +E++V S P LTDGSTETFWESG +D +RNK + ++ G G VAVH+DN R + + S + V + +++ GW
Sbjct: 3209 DITHSVELQVSSRAAMLPSLTDGSTETFWESGDEDRNRNKFVTIS-GNKGMNLKMVAVHVDNSRDLGNKVTSMTFLSGSSIDGLQKVQQSNLDARHTGW 3306
BLAST of mRNA_M-pyrifera_M_contig116561.3446.1 vs. uniprot
Match: A0A2G8KP17_STIJA (Putative E3 ubiquitin-protein ligase MYCBP2 n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8KP17_STIJA) HSP 1 Score: 63.5 bits (153), Expect = 2.000e-9 Identity = 39/109 (35.78%), Postives = 56/109 (51.38%), Query Frame = 1
Query: 1 MVDLTREIEIKVPSNEERRPMLTDGSTETFWESGIDDEDRNKEIVVTLG-PSGDTAIAVAVHLDNERAADKGCSKLVLKSAPPGAEQEAVLTATPKSKYAGWAMLRIPE 324
+VD+T IE +V S LTDGSTETFWESG DEDRNK V+T+ T +AVH+DN R + + L + + + + + ++ GW + E
Sbjct: 577 LVDITNSIECEVSSRSVMLGCLTDGSTETFWESG--DEDRNKPKVITIKVKDASTPSMLAVHIDNSRDLRNKVNLVTLGAGAHSSSLQKMKQVSLDMRFGGWVTFDLEE 683
BLAST of mRNA_M-pyrifera_M_contig116561.3446.1 vs. uniprot
Match: A0A2G8JP85_STIJA (Putative E3 ubiquitin-protein ligase MYCBP2 n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8JP85_STIJA) HSP 1 Score: 63.5 bits (153), Expect = 2.100e-9 Identity = 39/109 (35.78%), Postives = 56/109 (51.38%), Query Frame = 1
Query: 1 MVDLTREIEIKVPSNEERRPMLTDGSTETFWESGIDDEDRNKEIVVTLG-PSGDTAIAVAVHLDNERAADKGCSKLVLKSAPPGAEQEAVLTATPKSKYAGWAMLRIPE 324
+VD+T IE +V S LTDGSTETFWESG DEDRNK V+T+ T +AVH+DN R + + L + + + + + ++ GW + E
Sbjct: 1129 LVDITNSIECEVSSRSVMLGCLTDGSTETFWESG--DEDRNKPKVITIKVKDASTPSMLAVHIDNSRDLRNKVNLVTLGAGAHSSSLQKMKQVSLDMRFGGWVTFDLEE 1235
BLAST of mRNA_M-pyrifera_M_contig116561.3446.1 vs. uniprot
Match: A0A8J5DU30_9CHEL (E3 ubiquitin-protein ligase MYCBP2 n=1 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J5DU30_9CHEL) HSP 1 Score: 63.2 bits (152), Expect = 2.830e-9 Identity = 36/110 (32.73%), Postives = 55/110 (50.00%), Query Frame = 1
Query: 4 VDLTREIEIKVPSNEERRPMLTDGSTETFWESGIDDEDRNKEIVVTLGPSGDTAIAVAVHLDNERAADKGCSKLVLKSAPPGAEQEAVLTATPKSKYAGWAMLRIPESRH 333
++LT +EIK S + LTD T+TFWESG +D ++ K +++T G + VH+DN R + S + KS + +L ++KY GW I E H
Sbjct: 483 INLTPNVEIKTSSRQGMILNLTDQCTDTFWESGDEDRNKQKYVILTCGSQLHQPHGIYVHIDNTRDVGQKISHVCFKSGLSSDDLVKLLELDIEAKYCGWIFCPILEPGH 592
BLAST of mRNA_M-pyrifera_M_contig116561.3446.1 vs. uniprot
Match: UPI0014430DE2 (E3 ubiquitin-protein ligase MYCBP2-like n=1 Tax=Megalopta genalis TaxID=115081 RepID=UPI0014430DE2) HSP 1 Score: 63.2 bits (152), Expect = 2.880e-9 Identity = 38/109 (34.86%), Postives = 56/109 (51.38%), Query Frame = 1
Query: 7 DLTREIEIKVPSNEERRPMLTDGSTETFWESGIDDEDRNKEIVVTLGPSGDTAIAVAVHLDNERAADKGCSKLVLKSAPPGAEQEAVLTATPKSKYAGWAMLRIPESRH 333
DLT I+IK S + LTD STETFWESG +D ++ K I++ G + + +H+DN R S + +S E + T +S+ AGW + +SRH
Sbjct: 1516 DLTPGIKIKASSRQAMIGNLTDNSTETFWESGDEDRNKTKTIIINCGAHSLPRM-IYIHIDNCRDLTHKVSSVTFQSGNNADEMVKLRTVEIESRSAGWINCPVTDSRH 1623
BLAST of mRNA_M-pyrifera_M_contig116561.3446.1 vs. uniprot
Match: UPI001588A058 (E3 ubiquitin-protein ligase MYCBP2-like isoform X1 n=4 Tax=Chelonus insularis TaxID=460826 RepID=UPI001588A058) HSP 1 Score: 63.2 bits (152), Expect = 2.880e-9 Identity = 40/109 (36.70%), Postives = 56/109 (51.38%), Query Frame = 1
Query: 7 DLTREIEIKVPSNEERRPMLTDGSTETFWESGIDDEDRNKEIVVTLGPSGDTAIAVAVHLDNERAADKGCSKLVLKSAPPGAEQEAVLTATPKSKYAGWAMLRIPESRH 333
DLT IEIK S + LTD STETFWESG +D ++ K IV+ G + + VH+DN R S + +S E + T +++ AGW + +SRH
Sbjct: 1530 DLTPGIEIKASSRQAMIGHLTDSSTETFWESGDEDRNKTKTIVIVCGARSFPRM-IYVHIDNCRDLTHKVSSVTFQSGVNVDEMVKLRTVEIENRSAGWVNCPVIDSRH 1637 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116561.3446.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig116561.3446.1 >prot_M-pyrifera_M_contig116561.3446.1 ID=prot_M-pyrifera_M_contig116561.3446.1|Name=mRNA_M-pyrifera_M_contig116561.3446.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=111bp MVDLTREIEIKVPSNEERRPMLTDGSTETFWESGIDDEDRNKEIVVTLGPback to top mRNA from alignment at M-pyrifera_M_contig116561:11..343- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig116561.3446.1 ID=mRNA_M-pyrifera_M_contig116561.3446.1|Name=mRNA_M-pyrifera_M_contig116561.3446.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=333bp|location=Sequence derived from alignment at M-pyrifera_M_contig116561:11..343- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig116561:11..343- >mRNA_M-pyrifera_M_contig116561.3446.1 ID=mRNA_M-pyrifera_M_contig116561.3446.1|Name=mRNA_M-pyrifera_M_contig116561.3446.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=666bp|location=Sequence derived from alignment at M-pyrifera_M_contig116561:11..343- (Macrocystis pyrifera P11B4 male)back to top |