mRNA_M-pyrifera_M_contig11654.3439.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11654.3439.1 vs. uniprot
Match: D7FHH4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH4_ECTSI) HSP 1 Score: 205 bits (522), Expect = 3.210e-59 Identity = 106/137 (77.37%), Postives = 119/137 (86.86%), Query Frame = 2
Query: 398 RDLIVVGAGVIGMEYACMINVVPGTSVTVIDSRPNVLSFADSDIIEDLQYSMRQNGARFLLNERITRVEKVAR--NGNGPRVIAHLESGKRVVGDALLYTMGRQGNTDTMDLAKAGLEADSRGLLEVHAAQAVPAPR 802
RDLIVVGAGVIGMEYACMINVVPGT+VTVID RP VLSFAD+D+IE+LQY+MRQNGARFLLNE ITR+EK+ + + G +VIAHL SGKRVVGDALLYTMGRQGNTD+MDLA+AGLEAD RGLLEV+ PR
Sbjct: 183 RDLIVVGAGVIGMEYACMINVVPGTTVTVIDPRPTVLSFADNDVIENLQYTMRQNGARFLLNEHITRIEKIEKKDSNGGVKVIAHLASGKRVVGDALLYTMGRQGNTDSMDLARAGLEADKRGLLEVNDFYQTSNPR 319
BLAST of mRNA_M-pyrifera_M_contig11654.3439.1 vs. uniprot
Match: A0A6H5JP49_9PHAE (Pyr_redox_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP49_9PHAE) HSP 1 Score: 184 bits (467), Expect = 5.350e-54 Identity = 91/119 (76.47%), Postives = 103/119 (86.55%), Query Frame = 1
Query: 1 SRVRKVEAAETDVVTDQLSREGVEILTGTARFMKSTEGNRRVSAMVLRSSAGEHEAESSPYRHVDANTPKAVISGDRFLVACGTRPVRPAHIPFDGEYVFDSDQLLWGGIKHIPRQALL 357
SRV+KVE AETDVVTDQLSREGVEI+TGTARF+KS G+ R+SAMVLRS EHEA SSPYRHV A+TPK+VIS +RFLVACGTRPVRP IPFDG ++FDSDQLLWGGI HIPR ++
Sbjct: 36 SRVKKVEGAETDVVTDQLSREGVEIITGTARFVKSDSGDSRMSAMVLRSLGDEHEAASSPYRHVGADTPKSVISAERFLVACGTRPVRPPDIPFDGTHIFDSDQLLWGGITHIPRDLIV 154
BLAST of mRNA_M-pyrifera_M_contig11654.3439.1 vs. uniprot
Match: A0A835ZER9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZER9_9STRA) HSP 1 Score: 170 bits (431), Expect = 2.010e-45 Identity = 86/143 (60.14%), Postives = 108/143 (75.52%), Query Frame = 2
Query: 380 GKEDQNRDLIVVGAGVIGMEYACMINVVPGTSVTVIDSRPNVLSFADSDIIEDLQYSMRQNGARFLLNERITRVEKVARNGNGPR--VIAHLESGKRVVGDALLYTMGRQGNTDTMDLAKAGLEADSRGLLEVHAAQAVPAPR 802
G D R+L+VVGAGVIGMEYA M+N++PGT+VTVID R +L FAD+++++ L YSMR GARFLLNE++ RVEK G+G R V+AHL SGK+VVGDA+LY MGRQGNTD++ L GLE D+RGLLEV+ PR
Sbjct: 254 GVRDVPRELMVVGAGVIGMEYASMMNIIPGTNVTVIDPRDKMLGFADTEVVQALMYSMRTKGARFLLNEKVERVEKTDAGGSGGRGRVVAHLSSGKKVVGDAMLYAMGRQGNTDSLSLGSVGLETDNRGLLEVNDFYQTSNPR 396
BLAST of mRNA_M-pyrifera_M_contig11654.3439.1 vs. uniprot
Match: D7FKJ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKJ5_ECTSI) HSP 1 Score: 158 bits (399), Expect = 9.600e-41 Identity = 88/144 (61.11%), Postives = 106/144 (73.61%), Query Frame = 2
Query: 344 GKRYYDPFSDLRGKEDQ-NRDLIVVGAGVIGMEYACMINVVPGTSVTVIDSRPNVLSFADSDIIEDLQYSMRQNGARFLLNERITRVEKVARNGNGPRVIAHLESGKRVVGDALLYTMGRQGNTDTMDLAKAGLEADSRGLLEV 772
G R +D L G D+ RDLIVVGAGVIGMEYA MINV+PGT+VTVID R VL FAD ++ + L YSMR+NGARFLL E++ VEK+A +G V+AHL SGKRV GDALLY MGR GNTD+++L G++ D RGLL V
Sbjct: 216 GSRVFDSDQLLWGGVDRVPRDLIVVGAGVIGMEYASMINVIPGTTVTVIDPRDEVLGFADREVTQALCYSMRKNGARFLLGEKVKSVEKMA---DGTVVVAHLLSGKRVKGDALLYAMGRLGNTDSLNLEAIGVDPDERGLLNV 356
BLAST of mRNA_M-pyrifera_M_contig11654.3439.1 vs. uniprot
Match: A0A5D6XJI3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJI3_9STRA) HSP 1 Score: 147 bits (370), Expect = 5.850e-37 Identity = 77/123 (62.60%), Postives = 93/123 (75.61%), Query Frame = 2
Query: 404 LIVVGAGVIGMEYACMINVVPGTSVTVIDSRPNVLSFADSDIIEDLQYSMRQNGARFLLNERITRVEKVARNGNGPRVIAHLESGKRVVGDALLYTMGRQGNTDTMDLAKAGLEADSRGLLEV 772
LIVVGAGVIGMEYA M+N++PG VT+ID R +L AD ++ E L YSMRQ+GARF + E I RVEK A NG VI HL SGK +VGD LLYT+GRQGNT+ +DL+ GLEAD RGL++V
Sbjct: 239 LIVVGAGVIGMEYASMMNIIPGMEVTIIDGRKEILDMADREVSEALCYSMRQSGARFFVEETIKRVEK-AENGE---VIVHLNSGKSLVGDGLLYTLGRQGNTEGLDLSAVGLEADKRGLIQV 357
BLAST of mRNA_M-pyrifera_M_contig11654.3439.1 vs. uniprot
Match: W7TTE2_9STRA (Soluble pyridine nucleotide transhydrogenase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTE2_9STRA) HSP 1 Score: 143 bits (360), Expect = 2.060e-35 Identity = 78/136 (57.35%), Postives = 95/136 (69.85%), Query Frame = 2
Query: 398 RDLIVVGAGVIGMEYACMINVVPGTSVTVIDSRPNVLSFADSDIIEDLQYSMRQNGARFLLNERI--TRVEKVARNGNGPRVIAHLESGKRVVGDALLYTMGRQGNTDTMDLAKAGLEADSRGLLEVHAAQAVPAP 799
R+LIVVGAGVIGMEYA M NV+PGT VTVID RP+VL+FAD +II+ L+Y MRQ GARFLL E + RVE G V+A++ SGK + GD LLYT+GRQGNT + L KAG+E RGL+ V+ P
Sbjct: 270 RELIVVGAGVIGMEYASMFNVIPGTRVTVIDGRPDVLTFADKEIIQSLEYEMRQKGARFLLGEEVLNARVE-------GDHVVANMASGKVLRGDCLLYTVGRQGNTAGLGLDKAGVEVSKRGLMTVNDNYQTSVP 398
BLAST of mRNA_M-pyrifera_M_contig11654.3439.1 vs. uniprot
Match: K3WL68_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WL68_GLOUD) HSP 1 Score: 141 bits (355), Expect = 7.980e-35 Identity = 75/123 (60.98%), Postives = 90/123 (73.17%), Query Frame = 2
Query: 404 LIVVGAGVIGMEYACMINVVPGTSVTVIDSRPNVLSFADSDIIEDLQYSMRQNGARFLLNERITRVEKVARNGNGPRVIAHLESGKRVVGDALLYTMGRQGNTDTMDLAKAGLEADSRGLLEV 772
LIVVGAGVIGMEYA M++++PG VT+ID R +L AD ++ E L YSMRQ GARF + E I VEKV NG VI HL SGK +VGD LLYT+GRQGNTD ++L GLEAD RGL++V
Sbjct: 243 LIVVGAGVIGMEYASMMSIIPGMEVTIIDGRKEILDMADREVSEALCYSMRQTGARFFVEETIKSVEKV--NGE---VIVHLNSGKTLVGDGLLYTLGRQGNTDGLNLPAVGLEADKRGLIQV 360
BLAST of mRNA_M-pyrifera_M_contig11654.3439.1 vs. uniprot
Match: K3X332_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X332_GLOUD) HSP 1 Score: 139 bits (351), Expect = 2.210e-34 Identity = 81/153 (52.94%), Postives = 99/153 (64.71%), Query Frame = 2
Query: 344 GKRYYDPFSDLRGK-EDQNRDLIVVGAGVIGMEYACMINVVPGTSVTVIDSRPNVLSFADSDIIEDLQYSMRQNGARFLLNERITRVEKVARNGNGPRVIAHLESGKRVVGDALLYTMGRQGNTDTMDLAKAGLEADSRGLLEVHAAQAVPAP 799
GK +D L G D R LIVVGAGVIG+EYA M+NV+PG SVTVID+RP +LSF D++II +L Y MR GARFLL E I RVEK GNG V +L SGK DA+LYT+GRQ +TD ++L L + RGLL V+ + P
Sbjct: 206 GKVIFDSDQILSGDIRDLPRSLIVVGAGVIGIEYASMLNVIPGHSVTVIDARPEILSFCDNEIISNLTYEMRSKGARFLLGETINRVEKT---GNG--VTVYLNSGKVTSADAMLYTVGRQASTDGLNLEAVNLSRNPRGLLNVNKSYQTGQP 353
BLAST of mRNA_M-pyrifera_M_contig11654.3439.1 vs. uniprot
Match: A0A2D4CFW3_PYTIN (Soluble pyridine nucleotide transhydrogenase putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CFW3_PYTIN) HSP 1 Score: 141 bits (355), Expect = 2.860e-34 Identity = 76/123 (61.79%), Postives = 90/123 (73.17%), Query Frame = 2
Query: 404 LIVVGAGVIGMEYACMINVVPGTSVTVIDSRPNVLSFADSDIIEDLQYSMRQNGARFLLNERITRVEKVARNGNGPRVIAHLESGKRVVGDALLYTMGRQGNTDTMDLAKAGLEADSRGLLEV 772
LIVVGAGVIGMEYA M++++PGT VTVID R +L AD ++IE L YSMRQ G RF L E + VEK A NG V+ L SGK +V D LLYT+GRQGNTD ++LA GLEAD RGLL+V
Sbjct: 249 LIVVGAGVIGMEYASMMSIIPGTEVTVIDGRKEILDMADKEVIEALCYSMRQTGTRFHLEESVKSVEKAA-NGE---VVVKLNSGKTLVADGLLYTVGRQGNTDGLNLAAVGLEADKRGLLQV 367
BLAST of mRNA_M-pyrifera_M_contig11654.3439.1 vs. uniprot
Match: A0A2D4CH35_PYTIN (Soluble pyridine nucleotide transhydrogenase putative (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CH35_PYTIN) HSP 1 Score: 141 bits (355), Expect = 3.400e-34 Identity = 76/123 (61.79%), Postives = 90/123 (73.17%), Query Frame = 2
Query: 404 LIVVGAGVIGMEYACMINVVPGTSVTVIDSRPNVLSFADSDIIEDLQYSMRQNGARFLLNERITRVEKVARNGNGPRVIAHLESGKRVVGDALLYTMGRQGNTDTMDLAKAGLEADSRGLLEV 772
LIVVGAGVIGMEYA M++++PGT VTVID R +L AD ++IE L YSMRQ G RF L E + VEK A NG V+ L SGK +V D LLYT+GRQGNTD ++LA GLEAD RGLL+V
Sbjct: 197 LIVVGAGVIGMEYASMMSIIPGTEVTVIDGRKEILDMADKEVIEALCYSMRQTGTRFHLEESVKSVEKAA-NGE---VVVKLNSGKTLVADGLLYTVGRQGNTDGLNLAAVGLEADKRGLLQV 315 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11654.3439.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11654.3439.1 >prot_M-pyrifera_M_contig11654.3439.1 ID=prot_M-pyrifera_M_contig11654.3439.1|Name=mRNA_M-pyrifera_M_contig11654.3439.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=131bp MEYACMINVVPGTSVTVIDSRPNVLSFADSDIIEDLQYSMRQNGARFLLNback to top mRNA from alignment at M-pyrifera_M_contig11654:453..9358- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11654.3439.1 ID=mRNA_M-pyrifera_M_contig11654.3439.1|Name=mRNA_M-pyrifera_M_contig11654.3439.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=8906bp|location=Sequence derived from alignment at M-pyrifera_M_contig11654:453..9358- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11654:453..9358- >mRNA_M-pyrifera_M_contig11654.3439.1 ID=mRNA_M-pyrifera_M_contig11654.3439.1|Name=mRNA_M-pyrifera_M_contig11654.3439.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=786bp|location=Sequence derived from alignment at M-pyrifera_M_contig11654:453..9358- (Macrocystis pyrifera P11B4 male)back to top |