mRNA_M-pyrifera_M_contig116448.3424.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig116448.3424.1 vs. uniprot
Match: A0A517W6M6_9PLAN (Oxygen-independent coproporphyrinogen-III oxidase 1 n=6 Tax=Gimesia TaxID=1649453 RepID=A0A517W6M6_9PLAN) HSP 1 Score: 359 bits (922), Expect = 1.200e-121 Identity = 179/186 (96.24%), Postives = 183/186 (98.39%), Query Frame = 1
Query: 1 LRIEARQVRDQLPDFHFSQLAIGGGTPTYLEPDELAQLFDILQRELNTSPAQLPCSLEASPATLTAEKVALIHDQGIDRLSLGIQSFDEQEALSIGRPQKRREIVEALELVRNVGIPTLNLDLIYGADGQTVDSFRDSLQQALAFQPEELYLYPLYVRPLTGLGRKQQQWDDHRLTLYRAGRDFLL 558
LRIEARQVRDQLPDFHFSQLAIGGGTPTYLEP+ELAQLFDILQ+ELNTSPAQLPCSLEASPATLTAEKVALIHDQGIDR+SLGIQSFDEQEALSIGRPQKRREI+EALELVRNVGIPTLNLDLIYGADGQTVDSF DSLQQALAFQPEELYLYPLYVRPLTGLGRK QQWDDHRLTLYR GRDFLL
Sbjct: 83 LRIEARQVRDQLPDFHFSQLAIGGGTPTYLEPNELAQLFDILQKELNTSPAQLPCSLEASPATLTAEKVALIHDQGIDRISLGIQSFDEQEALSIGRPQKRREILEALELVRNVGIPTLNLDLIYGADGQTVDSFHDSLQQALAFQPEELYLYPLYVRPLTGLGRKPQQWDDHRLTLYRTGRDFLL 268
BLAST of mRNA_M-pyrifera_M_contig116448.3424.1 vs. uniprot
Match: A0A518A0N2_9PLAN (Oxygen-independent coproporphyrinogen-III oxidase 1 n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A0N2_9PLAN) HSP 1 Score: 326 bits (836), Expect = 1.280e-108 Identity = 158/186 (84.95%), Postives = 174/186 (93.55%), Query Frame = 1
Query: 1 LRIEARQVRDQLPDFHFSQLAIGGGTPTYLEPDELAQLFDILQRELNTSPAQLPCSLEASPATLTAEKVALIHDQGIDRLSLGIQSFDEQEALSIGRPQKRREIVEALELVRNVGIPTLNLDLIYGADGQTVDSFRDSLQQALAFQPEELYLYPLYVRPLTGLGRKQQQWDDHRLTLYRAGRDFLL 558
LR+EARQVRDQLPDFHFSQLAIGGGTPTYLEPDELAQLF+ILQ+EL+TSP Q+P S+E SPATLTAEKV LI QG+DR+SLGIQSFDEQEAL +GRPQKR+EI++AL+LVR+ G PTLNLDLIYGADGQT SFRDSLQQALAF+PEE+YLYPLYVRPLTGLGRKQQQWDDHRL LYRAGRDFLL
Sbjct: 83 LRVEARQVRDQLPDFHFSQLAIGGGTPTYLEPDELAQLFEILQQELHTSPEQIPASIEGSPATLTAEKVTLIRAQGVDRISLGIQSFDEQEALRLGRPQKRKEILQALDLVRSAGFPTLNLDLIYGADGQTAASFRDSLQQALAFRPEEIYLYPLYVRPLTGLGRKQQQWDDHRLALYRAGRDFLL 268
BLAST of mRNA_M-pyrifera_M_contig116448.3424.1 vs. uniprot
Match: A0A517R9U3_9PLAN (Oxygen-independent coproporphyrinogen-III oxidase 1 n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517R9U3_9PLAN) HSP 1 Score: 266 bits (681), Expect = 3.350e-85 Identity = 132/186 (70.97%), Postives = 154/186 (82.80%), Query Frame = 1
Query: 1 LRIEARQVRDQLPDFHFSQLAIGGGTPTYLEPDELAQLFDILQRELNTSPAQLPCSLEASPATLTAEKVALIHDQGIDRLSLGIQSFDEQEALSIGRPQKRREIVEALELVRNVGIPTLNLDLIYGADGQTVDSFRDSLQQALAFQPEELYLYPLYVRPLTGLGRKQQQWDDHRLTLYRAGRDFLL 558
L+I+A Q+R QLP FSQLAIGGGTPT+L EL QLF IL E++ P +P +EASPATLT+EKV L+ D GIDRLS+GIQSF EQE ++GRPQKR+EI +AL+L++N G TLNLDLIYGADGQTVDS+ DSLQQAL +QP+ELYLYPLYVRPLTGLGRK + WDDHRLTLYRAGRDFLL
Sbjct: 83 LQIQAEQIRKQLPQARFSQLAIGGGTPTWLNRHELDQLFAILTSEMHYQPGAIPACIEASPATLTSEKVQLLKDFGIDRLSMGIQSFYEQETRNLGRPQKRKEIHQALDLIKNTGFSTLNLDLIYGADGQTVDSWLDSLQQALDYQPQELYLYPLYVRPLTGLGRKLKDWDDHRLTLYRAGRDFLL 268
BLAST of mRNA_M-pyrifera_M_contig116448.3424.1 vs. uniprot
Match: A0A7V7ZLK8_9CHLR (Coproporphyrinogen III oxidase family protein n=1 Tax=Chloroflexia bacterium SDU3-3 TaxID=2651839 RepID=A0A7V7ZLK8_9CHLR) HSP 1 Score: 221 bits (564), Expect = 1.280e-67 Identity = 105/185 (56.76%), Postives = 140/185 (75.68%), Query Frame = 1
Query: 1 LRIEARQVRDQLPDFHFSQLAIGGGTPTYLEPDELAQLFDILQRELNTSPAQLPCSLEASPATLTAEKVALIHDQGIDRLSLGIQSFDEQEALSIGRPQKRREIVEALELVRNVGIPTLNLDLIYGADGQTVDSFRDSLQQALAFQPEELYLYPLYVRPLTGLGRKQQQWDDHRLTLYRAGRDFL 555
L +A QVR+ L F++ AIGGGTPTYL P +L +LFDI +R P +P S+E SP T AE++A++ ++G DR+S+G+QSF E+EA + GRPQK ++ AL+ +R+ G PTLN+DLIYG DGQTV S+ ++L+ AL +QPE+LYLYPLYVRPLTGLGR+Q++WDD RL YRAGRDFL
Sbjct: 83 LERQAAQVREALGQAQFARFAIGGGTPTYLPPADLHRLFDIAERGYRVRPHDIPVSVETSPKTADAERLAVLRERGADRISIGVQSFIEREAAAAGRPQKTADVERALDRIRSFGFPTLNIDLIYGIDGQTVASWLETLRAALRYQPEQLYLYPLYVRPLTGLGRRQREWDDVRLACYRAGRDFL 267
BLAST of mRNA_M-pyrifera_M_contig116448.3424.1 vs. uniprot
Match: A0A5S4F9P6_9ACTN (Coproporphyrinogen III oxidase family protein n=1 Tax=Nonomuraea turkmeniaca TaxID=103838 RepID=A0A5S4F9P6_9ACTN) HSP 1 Score: 210 bits (534), Expect = 2.580e-63 Identity = 102/185 (55.14%), Postives = 137/185 (74.05%), Query Frame = 1
Query: 1 LRIEARQVRDQLPDFHFSQLAIGGGTPTYLEPDELAQLFDILQRELNTSPAQLPCSLEASPATLTAEKVALIHDQGIDRLSLGIQSFDEQEALSIGRPQKRREIVEALELVRNVGIPTLNLDLIYGADGQTVDSFRDSLQQALAFQPEELYLYPLYVRPLTGLGRKQQQWDDHRLTLYRAGRDFL 555
L +A QVRD L + F+ A GGGTPTYL ELA+LFD+ +R + + ++P S+E SPAT T +++A++ ++G R+S+G+QSF + EA + RPQKR E+ AL+ +R G+P LN+DLIYG DGQTVDS+ S++ ALA+ PEELYLYPLYVRPLTGLG++ + WDD RL LYRAGRD L
Sbjct: 72 LERQAVQVRDALEETGFATAAFGGGTPTYLSAGELARLFDLTERAMGVAFDRIPLSVETSPATATPDRLAVLVERGTTRVSIGVQSFIDAEARAAVRPQKRAEVAAALDTIRAAGVPVLNIDLIYGIDGQTVDSWLSSIEAALAWHPEELYLYPLYVRPLTGLGKQGRAWDDQRLELYRAGRDRL 256
BLAST of mRNA_M-pyrifera_M_contig116448.3424.1 vs. uniprot
Match: A0A5S4GJA8_9ACTN (Coproporphyrinogen III oxidase family protein n=1 Tax=Nonomuraea zeae TaxID=1642303 RepID=A0A5S4GJA8_9ACTN) HSP 1 Score: 208 bits (529), Expect = 1.480e-62 Identity = 103/186 (55.38%), Postives = 134/186 (72.04%), Query Frame = 1
Query: 1 LRIEARQVRDQLPDFHFSQLAIGGGTPTYLEPDELAQLFDILQRELNTSPAQLPCSLEASPATLTAEKVALIHDQGIDRLSLGIQSFDEQEALSIGRPQKRREIVEALELVRNVGIPTLNLDLIYGADGQTVDSFRDSLQQALAFQPEELYLYPLYVRPLTGLGRKQQQWDDHRLTLYRAGRDFLL 558
L +A QVR+ L D FS A GGGTPTYL EL +LFD+ +R + A++P S+E SPAT T ++++++ ++G R+S+G+QSF + EA S RPQKR E+ AL+ +R G+P LN+DLIYG DGQT S+ SL AL ++PEELYLYPLYVRPLTGLGR+ + WDD RL LYRAGRD LL
Sbjct: 72 LERQAEQVREALEDSGFSTAAFGGGTPTYLSAGELTRLFDLTERAMGVDLARIPLSVETSPATATPDRLSVLAERGTARISIGVQSFVDAEARSAVRPQKRAEVDAALDAIRAAGVPVLNIDLIYGIDGQTPRSWLYSLDTALGWRPEELYLYPLYVRPLTGLGRQGRAWDDQRLELYRAGRDHLL 257
BLAST of mRNA_M-pyrifera_M_contig116448.3424.1 vs. uniprot
Match: B9XL16_PEDPL (Coproporphyrinogen dehydrogenase n=1 Tax=Pedosphaera parvula (strain Ellin514) TaxID=320771 RepID=B9XL16_PEDPL) HSP 1 Score: 208 bits (530), Expect = 1.760e-62 Identity = 101/186 (54.30%), Postives = 136/186 (73.12%), Query Frame = 1
Query: 1 LRIEARQVRDQLPDFHFSQLAIGGGTPTYLEPDELAQLFDILQRELNTSPAQLPCSLEASPATLTAEKVALIHDQGIDRLSLGIQSFDEQEALSIGRPQKRREIVEALELVRNVGIPTLNLDLIYGADGQTVDSFRDSLQQALAFQPEELYLYPLYVRPLTGLGRKQQQWDDHRLTLYRAGRDFLL 558
L+ +A VRD L + F++LA GGGTPT+LEP EL LF +++ + LP S+E SPAT T E++ L+HD G+DR+S+GIQSF E E ++GR QKR+E+ AL+ +R++ PTLN+DLIYG GQT+DS+ +SL AL ++PEEL+LYPLYVRPLTGLGRK + W+D RL +YR R LL
Sbjct: 88 LQRQASVVRDALHNPAFARLAFGGGTPTFLEPAELEILFAVVEEIMGADSRSLPFSVETSPATATCERLNLLHDHGVDRISIGIQSFLEHEVAAVGRSQKRQEVETALQNIRSLNFPTLNIDLIYGLPGQTMDSWMESLSSALQYRPEELFLYPLYVRPLTGLGRKDRHWEDLRLQMYREARSRLL 273
BLAST of mRNA_M-pyrifera_M_contig116448.3424.1 vs. uniprot
Match: A0A7Z9PVF5_9BACT (Coproporphyrinogen III oxidase family protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9PVF5_9BACT) HSP 1 Score: 207 bits (528), Expect = 2.360e-62 Identity = 102/186 (54.84%), Postives = 133/186 (71.51%), Query Frame = 1
Query: 1 LRIEARQVRDQLPDFHFSQLAIGGGTPTYLEPDELAQLFDILQRELNTSPAQLPCSLEASPATLTAEKVALIHDQGIDRLSLGIQSFDEQEALSIGRPQKRREIVEALELVRNVGIPTLNLDLIYGADGQTVDSFRDSLQQALAFQPEELYLYPLYVRPLTGLGRKQQQWDDHRLTLYRAGRDFLL 558
LR+EA + L + F++LA+GGGTPTYL EL LF I+ + SP +P S+E SP T+TAEK+ + + G+DR S+GIQSF E+E S+ RPQK EAL ++++ G T+N+DLIYG QT S+R+SL+ ALA+ PEELYLYPLY+RPLTGLGR+ + WDD RLTLYR GRDFLL
Sbjct: 82 LRVEAEANMEALGEASFARLAVGGGTPTYLSLTELVDLFSIITGVMGCSPEAVPSSVEMSPETVTAEKLQYLAELGVDRASIGIQSFVEEETRSLRRPQKPETAREALRMMKDAGFATVNIDLIYGIRDQTARSWRESLENALAYDPEELYLYPLYLRPLTGLGRRSRPWDDQRLTLYRQGRDFLL 267
BLAST of mRNA_M-pyrifera_M_contig116448.3424.1 vs. uniprot
Match: A0A7W7S4E8_9ACTN (Oxygen-independent coproporphyrinogen-3 oxidase n=2 Tax=Streptosporangium album TaxID=47479 RepID=A0A7W7S4E8_9ACTN) HSP 1 Score: 209 bits (531), Expect = 4.460e-62 Identity = 104/186 (55.91%), Postives = 133/186 (71.51%), Query Frame = 1
Query: 1 LRIEARQVRDQLPDFHFSQLAIGGGTPTYLEPDELAQLFDILQRELNTSPAQLPCSLEASPATLTAEKVALIHDQGIDRLSLGIQSFDEQEALSIGRPQKRREIVEALELVRNVGIPTLNLDLIYGADGQTVDSFRDSLQQALAFQPEELYLYPLYVRPLTGLGRKQQQWDDHRLTLYRAGRDFLL 558
L +AR VRD L F AIGGGTPTYL EL ++FD+ +R + +P S+E SPAT TA+++A++ ++G R+S+G+QSF + EA + RPQ+RRE+ AL+ +R VG TLNLDLIYG DGQT S+R SL AL ++PEE+YLYPLYVRPLTGLGR+ WDDHRL LYR GRD LL
Sbjct: 121 LERQARAVRDALEGPRFVTAAIGGGTPTYLSAAELTRMFDLTERIMGADLRAVPLSVETSPATATADRLAVLAERGTTRVSIGVQSFVDAEARAAVRPQRRREVEAALDRIREVGFETLNLDLIYGIDGQTERSWRHSLDAALGWKPEEIYLYPLYVRPLTGLGRRAHDWDDHRLGLYRQGRDHLL 306
BLAST of mRNA_M-pyrifera_M_contig116448.3424.1 vs. uniprot
Match: UPI0016614C03 (STM4012 family radical SAM protein n=1 Tax=Nonomuraea sp. SYSU D8015 TaxID=2593644 RepID=UPI0016614C03) HSP 1 Score: 206 bits (524), Expect = 7.870e-62 Identity = 99/185 (53.51%), Postives = 136/185 (73.51%), Query Frame = 1
Query: 1 LRIEARQVRDQLPDFHFSQLAIGGGTPTYLEPDELAQLFDILQRELNTSPAQLPCSLEASPATLTAEKVALIHDQGIDRLSLGIQSFDEQEALSIGRPQKRREIVEALELVRNVGIPTLNLDLIYGADGQTVDSFRDSLQQALAFQPEELYLYPLYVRPLTGLGRKQQQWDDHRLTLYRAGRDFL 555
L +A QVR+ L + F+ A GGGTPTYL EL +LFD+ +R + A +P S+E SPAT T +++A++ ++G R+S+G+QSF + EA + RPQ+R E+ AL+ +R G+P LN+DLIYG DGQTVDS+ S++ ALA++PEELYLYPLYVRPLTGLG++ + WDD R+ LYRAGRD L
Sbjct: 72 LERQAGQVREALEETGFTTAAFGGGTPTYLSAGELTRLFDLSERTMGVDFAHIPLSVETSPATATPDRLAVLVERGTTRISIGVQSFVDAEARAAVRPQRRAEVEAALDAIRTAGVPVLNIDLIYGIDGQTVDSWLYSIETALAWRPEELYLYPLYVRPLTGLGKQGRAWDDQRMELYRAGRDRL 256 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116448.3424.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig116448.3424.1 >prot_M-pyrifera_M_contig116448.3424.1 ID=prot_M-pyrifera_M_contig116448.3424.1|Name=mRNA_M-pyrifera_M_contig116448.3424.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=186bp LRIEARQVRDQLPDFHFSQLAIGGGTPTYLEPDELAQLFDILQRELNTSPback to top mRNA from alignment at M-pyrifera_M_contig116448:3..560+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig116448.3424.1 ID=mRNA_M-pyrifera_M_contig116448.3424.1|Name=mRNA_M-pyrifera_M_contig116448.3424.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=558bp|location=Sequence derived from alignment at M-pyrifera_M_contig116448:3..560+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig116448:3..560+ >mRNA_M-pyrifera_M_contig116448.3424.1 ID=mRNA_M-pyrifera_M_contig116448.3424.1|Name=mRNA_M-pyrifera_M_contig116448.3424.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1116bp|location=Sequence derived from alignment at M-pyrifera_M_contig116448:3..560+ (Macrocystis pyrifera P11B4 male)back to top |