mRNA_M-pyrifera_M_contig116440.3420.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig116440.3420.1 vs. uniprot
Match: A0A517WB88_9PLAN (Basal-body rod modification protein FlgD n=5 Tax=Gimesia TaxID=1649453 RepID=A0A517WB88_9PLAN) HSP 1 Score: 216 bits (550), Expect = 1.690e-70 Identity = 115/117 (98.29%), Postives = 117/117 (100.00%), Query Frame = 1
Query: 1 NGLTADNFMKLLITELQNQDPTNPMGNEELLGQISSMRELQSNIELSDTLKEITSGQSLTQAAGLIGKQVEGKDSSDNSVSGVVERAFVRDSKAYVAIGNSEVPVSSITSVQEPASE 351
NGLTADNFMKLLITELQNQDPTNPMGNEELLGQISSMRELQSNIELSDTLKEITSGQSLTQAAGLIGKQVEG+DSSDNSVSGVVERAFVRDSKAYVA+GNSEVPVSSITSVQEPASE
Sbjct: 29 NGLTADNFMKLLITELQNQDPTNPMGNEELLGQISSMRELQSNIELSDTLKEITSGQSLTQAAGLIGKQVEGQDSSDNSVSGVVERAFVRDSKAYVAVGNSEVPVSSITSVQEPASE 145
BLAST of mRNA_M-pyrifera_M_contig116440.3420.1 vs. uniprot
Match: A0A518A4U3_9PLAN (Flagellar basal body rod modification protein n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A4U3_9PLAN) HSP 1 Score: 184 bits (466), Expect = 1.060e-57 Identity = 94/117 (80.34%), Postives = 110/117 (94.02%), Query Frame = 1
Query: 1 NGLTADNFMKLLITELQNQDPTNPMGNEELLGQISSMRELQSNIELSDTLKEITSGQSLTQAAGLIGKQVEGKDSSDNSVSGVVERAFVRDSKAYVAIGNSEVPVSSITSVQEPASE 351
NGLTA++FMK+LITELQNQDPT PMGNEELLGQISSMRELQSNIELSDTLKEIT+GQSLTQAAGLIGK++EG++ S + V+G+V+RAFVRD+KAYV IG SE+PVS+ITSV +PASE
Sbjct: 29 NGLTAESFMKMLITELQNQDPTKPMGNEELLGQISSMRELQSNIELSDTLKEITTGQSLTQAAGLIGKEIEGQEGSQSPVAGLVDRAFVRDNKAYVGIGTSELPVSAITSVTQPASE 145
BLAST of mRNA_M-pyrifera_M_contig116440.3420.1 vs. uniprot
Match: A0A3D3RA93_9PLAN (Basal-body rod modification protein FlgD n=7 Tax=Planctomycetaceae TaxID=126 RepID=A0A3D3RA93_9PLAN) HSP 1 Score: 177 bits (450), Expect = 2.910e-55 Identity = 93/116 (80.17%), Postives = 105/116 (90.52%), Query Frame = 1
Query: 1 NGLTADNFMKLLITELQNQDPTNPMGNEELLGQISSMRELQSNIELSDTLKEITSGQSLTQAAGLIGKQVEGKDSSDNSVSGVVERAFVRDSKAYVAIGNSEVPVSSITSVQEPAS 348
NGLTA++FMKLLITELQNQDPT P+GNE+LL QISSMRELQSNIELSDTLKEIT+GQSLTQAA LIGK+VEG++ N V+GVVERAFVRD K+YV IG E+PVS+ITSVQEPAS
Sbjct: 29 NGLTAESFMKLLITELQNQDPTEPLGNEQLLAQISSMRELQSNIELSDTLKEITTGQSLTQAAALIGKEVEGQEGQQNPVAGVVERAFVRDGKSYVGIGAFELPVSAITSVQEPAS 144
BLAST of mRNA_M-pyrifera_M_contig116440.3420.1 vs. uniprot
Match: A0A517WWA2_9PLAN (Flagellar basal body rod modification protein n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WWA2_9PLAN) HSP 1 Score: 171 bits (432), Expect = 1.500e-52 Identity = 85/116 (73.28%), Postives = 106/116 (91.38%), Query Frame = 1
Query: 1 NGLTADNFMKLLITELQNQDPTNPMGNEELLGQISSMRELQSNIELSDTLKEITSGQSLTQAAGLIGKQVEGKDSSDNSVSGVVERAFVRDSKAYVAIGNSEVPVSSITSVQEPAS 348
+GLTA++F+KLLITELQNQDPT P+GNE+LL Q+SSMRELQSN+ELSDTL EIT GQSLTQAAGLIGK++EG+ +++G+V+RAFVRD KAYVA+G++E+PVS+ITSVQEPAS
Sbjct: 26 SGLTAEDFLKLLITELQNQDPTEPLGNEQLLAQLSSMRELQSNVELSDTLTEITLGQSLTQAAGLIGKEIEGQADDQPAIAGIVDRAFVRDGKAYVAVGDTELPVSAITSVQEPAS 141
BLAST of mRNA_M-pyrifera_M_contig116440.3420.1 vs. uniprot
Match: A0A518IAQ6_9PLAN (Flagellar basal body rod modification protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518IAQ6_9PLAN) HSP 1 Score: 170 bits (431), Expect = 2.130e-52 Identity = 86/114 (75.44%), Postives = 102/114 (89.47%), Query Frame = 1
Query: 1 NGLTADNFMKLLITELQNQDPTNPMGNEELLGQISSMRELQSNIELSDTLKEITSGQSLTQAAGLIGKQVEGKDSSDNSVSGVVERAFVRDSKAYVAIGNSEVPVSSITSVQEP 342
NGLTAD FMKLLITELQNQDPT P+GNE+LL Q+SSMRELQSNIELSDTLKEIT+GQSLTQAAGLIGK++EG+D V GVV+RAFVR+ KAYV +G+SE+PVS+I++V+ P
Sbjct: 26 NGLTADTFMKLLITELQNQDPTEPLGNEQLLAQLSSMRELQSNIELSDTLKEITTGQSLTQAAGLIGKEIEGQDGEQPPVEGVVDRAFVREGKAYVGVGSSELPVSAISNVRTP 139
BLAST of mRNA_M-pyrifera_M_contig116440.3420.1 vs. uniprot
Match: A0A517VZ80_9PLAN (Flagellar basal body rod modification protein n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VZ80_9PLAN) HSP 1 Score: 168 bits (425), Expect = 1.750e-51 Identity = 82/116 (70.69%), Postives = 104/116 (89.66%), Query Frame = 1
Query: 1 NGLTADNFMKLLITELQNQDPTNPMGNEELLGQISSMRELQSNIELSDTLKEITSGQSLTQAAGLIGKQVEGKDSSDNSVSGVVERAFVRDSKAYVAIGNSEVPVSSITSVQEPAS 348
+GLTAD+F+KL ITELQNQDPT P+GNE+LL Q+SSMRELQSNIELSDTL EIT GQ LTQAAGLIGK++EG++ +++G+V+RAFVRD KAY+ +G++E+PVS+IT+VQEPAS
Sbjct: 26 SGLTADDFLKLFITELQNQDPTEPLGNEQLLNQLSSMRELQSNIELSDTLTEITLGQGLTQAAGLIGKEIEGQEDGQPAIAGIVDRAFVRDGKAYIGVGDAELPVSAITNVQEPAS 141
BLAST of mRNA_M-pyrifera_M_contig116440.3420.1 vs. uniprot
Match: A0A836RGQ0_9PLAN (Flagellar hook capping protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A836RGQ0_9PLAN) HSP 1 Score: 125 bits (314), Expect = 1.430e-34 Identity = 67/119 (56.30%), Postives = 89/119 (74.79%), Query Frame = 1
Query: 1 NGLTADNFMKLLITELQNQDPTNPMGNEELLGQISSMRELQSNIELSDTLKEITSG-------QSLTQAAGLIGKQVEGKDSSDNSVSGVVERAFVRDSKAYVAIGNSEVPVSSITSVQ 336
N LT+++F+KLLIT+LQNQDPT PMGN+ELL QIS +R+LQSNIELSDTLK ++ Q L+ AA LIGK V GK +D+ ++GVV+RAF+ + K YV IG+ + +S ITSV+
Sbjct: 23 NKLTSEDFLKLLITQLQNQDPTEPMGNDELLSQISMLRDLQSNIELSDTLKAMSDSFAANLLSQQLSAAASLIGKLVTGKTENDDVITGVVDRAFLENGKVYVGIGDRRIELSKITSVE 141
BLAST of mRNA_M-pyrifera_M_contig116440.3420.1 vs. uniprot
Match: A0A517R594_9BACT (Flagellar basal body rod modification protein n=1 Tax=Planctomycetes bacterium Pan189 TaxID=2527980 RepID=A0A517R594_9BACT) HSP 1 Score: 117 bits (294), Expect = 1.190e-31 Identity = 60/115 (52.17%), Postives = 87/115 (75.65%), Query Frame = 1
Query: 1 NGLTADNFMKLLITELQNQDPTNPMGNEELLGQISSMRELQSNIELSDTLKEITSGQSLTQAAGLIGKQVEGKDSSDNSVSGVVERAFVRDSKAYVAIGNSEVPVSSITSVQEPA 345
N LT+++F++LLI +LQNQDP+ P+ NEELLGQIS+MR+LQ+++EL++TL+ ITS Q LT AA LIGK V G D S +SGVVE+AF+ D +AYV + ++ + ++ + V A
Sbjct: 23 NALTSEDFLELLIVQLQNQDPSEPVSNEELLGQISTMRQLQADLELTETLEAITSDQLLTSAASLIGKSVAGTDVSGAGLSGVVEKAFLTDGEAYVQVDSTPMKLADVLEVASAA 137
BLAST of mRNA_M-pyrifera_M_contig116440.3420.1 vs. uniprot
Match: A0A3B1DC02_9ZZZZ (Flagellar basal-body rod modification protein FlgD n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1DC02_9ZZZZ) HSP 1 Score: 117 bits (293), Expect = 1.740e-31 Identity = 61/112 (54.46%), Postives = 87/112 (77.68%), Query Frame = 1
Query: 1 NGLTADNFMKLLITELQNQDPTNPMGNEELLGQISSMRELQSNIELSDTLKEITSGQSLTQAAGLIGKQVEGKDSSDNSVSGVVERAFVRDSKAYVAI-GNSEVPVSSITSV 333
+ L +++F+KLLIT+LQNQDP+ P NE+LL QIS+MR LQSN++L DTL+ IT+ Q L+ AA IGK V G D+++ SV+G+V RAFVRD K +V + N+E+ +SS++SV
Sbjct: 21 SALKSEDFLKLLITQLQNQDPSEPTSNEDLLNQISAMRSLQSNLDLGDTLQSITANQQLSTAATFIGKTVTGLDANNASVTGLVTRAFVRDDKTFVEVDNNAELEISSVSSV 132
BLAST of mRNA_M-pyrifera_M_contig116440.3420.1 vs. uniprot
Match: A0A7W0M6K0_9PLAN (Flagellar hook capping protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7W0M6K0_9PLAN) HSP 1 Score: 116 bits (291), Expect = 3.300e-31 Identity = 59/111 (53.15%), Postives = 80/111 (72.07%), Query Frame = 1
Query: 1 NGLTADNFMKLLITELQNQDPTNPMGNEELLGQISSMRELQSNIELSDTLKEITSGQSLTQAAGLIGKQVEGKDSSDNSVSGVVERAFVRDSKAYVAIGNSEVPVSSITSV 333
N LT+ +F+KLL+T+LQNQDPT P+GNEELL Q+S MR LQSNIEL + +K ++S Q+L+ AAG IGK V+G S +V+GVV+ AF+ D AYV + V +S + V
Sbjct: 23 NALTSADFLKLLVTQLQNQDPTEPVGNEELLNQLSMMRSLQSNIELGEAVKSVSSNQNLSMAAGFIGKTVKGSLSDGTAVTGVVDSAFLADGAAYVKVSGQSVALSRVLEV 133 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116440.3420.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig116440.3420.1 >prot_M-pyrifera_M_contig116440.3420.1 ID=prot_M-pyrifera_M_contig116440.3420.1|Name=mRNA_M-pyrifera_M_contig116440.3420.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=110bp MKLLITELQNQDPTNPMGNEELLGQISSMRELQSNIELSDTLKEITSGQSback to top mRNA from alignment at M-pyrifera_M_contig116440:3..356+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig116440.3420.1 ID=mRNA_M-pyrifera_M_contig116440.3420.1|Name=mRNA_M-pyrifera_M_contig116440.3420.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=354bp|location=Sequence derived from alignment at M-pyrifera_M_contig116440:3..356+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig116440:3..356+ >mRNA_M-pyrifera_M_contig116440.3420.1 ID=mRNA_M-pyrifera_M_contig116440.3420.1|Name=mRNA_M-pyrifera_M_contig116440.3420.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=660bp|location=Sequence derived from alignment at M-pyrifera_M_contig116440:3..356+ (Macrocystis pyrifera P11B4 male)back to top |