mRNA_M-pyrifera_M_contig116412.3412.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig116412.3412.1 vs. uniprot
Match: A0A2D8GIX6_9ACTN (Uncharacterized protein n=7 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8GIX6_9ACTN) HSP 1 Score: 88.2 bits (217), Expect = 9.630e-21 Identity = 40/66 (60.61%), Postives = 52/66 (78.79%), Query Frame = 1
Query: 70 QRKSTPKVDPKEFWGDPDLLPERIDRVQASPDVRAVLTSLGRPPLAGNETAGEHWFSMVYERAAFL 267
Q+++ PKVDP EFWGDP LP+ + + +PD +AV+ SLGR PL+G+ETA EHWFS+VYERAA L
Sbjct: 31 QKRNEPKVDPVEFWGDPAALPDPMRAIAEAPDPKAVVRSLGRVPLSGHETAAEHWFSLVYERAAVL 96
BLAST of mRNA_M-pyrifera_M_contig116412.3412.1 vs. uniprot
Match: A0A6B1B2P3_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1B2P3_9ACTN) HSP 1 Score: 85.5 bits (210), Expect = 1.200e-19 Identity = 43/76 (56.58%), Postives = 57/76 (75.00%), Query Frame = 1
Query: 40 GKQQSKNQGTQRKSTPKVDPKEFWGDPDLLPERIDRVQASPDVRAVLTSLGRPPLAGNETAGEHWFSMVYERAAFL 267
G+Q ++++G RK+ K++P EFWGDP+LLP + V S D RA+L SLGRPP+ G ETA E WF++VYERAAFL
Sbjct: 29 GRQNAQSRG--RKAAAKINPIEFWGDPELLPAPEEVVAQSGDARALLNSLGRPPVPGQETAAERWFTLVYERAAFL 102
BLAST of mRNA_M-pyrifera_M_contig116412.3412.1 vs. uniprot
Match: A0A7Y2DCK6_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DCK6_9ACTN) HSP 1 Score: 63.2 bits (152), Expect = 9.860e-11 Identity = 30/60 (50.00%), Postives = 40/60 (66.67%), Query Frame = 1
Query: 88 KVDPKEFWGDPDLLPERIDRVQASPDVRAVLTSLGRPPLAGNETAGEHWFSMVYERAAFL 267
+ DP +FWGD + LPE V + D A++ SLGR P+ G+E A EH+F +VYERAA L
Sbjct: 62 RFDPVKFWGDVEALPEPPRSVVTASDPYAIVQSLGRAPIPGHENASEHYFRLVYERAASL 121
BLAST of mRNA_M-pyrifera_M_contig116412.3412.1 vs. uniprot
Match: A0A349B0Q3_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349B0Q3_9ACTN) HSP 1 Score: 62.0 bits (149), Expect = 1.810e-10 Identity = 30/55 (54.55%), Postives = 36/55 (65.45%), Query Frame = 1
Query: 103 EFWGDPDLLPERIDRVQASPDVRAVLTSLGRPPLAGNETAGEHWFSMVYERAAFL 267
EFWGDP LPE D ++ + D AV+ SLGRPPL G E A E +F+ VY RA L
Sbjct: 39 EFWGDPKTLPEPRDDIRITQDPSAVVRSLGRPPLPGQEQASEAYFAAVYARAVGL 93
BLAST of mRNA_M-pyrifera_M_contig116412.3412.1 vs. uniprot
Match: A0A2E4XMA8_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E4XMA8_9ACTN) HSP 1 Score: 62.4 bits (150), Expect = 2.580e-10 Identity = 29/65 (44.62%), Postives = 43/65 (66.15%), Query Frame = 1
Query: 73 RKSTPKVDPKEFWGDPDLLPERIDRVQASPDVRAVLTSLGRPPLAGNETAGEHWFSMVYERAAFL 267
R+S K DP++FWG+PDLLP+ I + A+ +SLGRPP++G ET+ +F +YER+ L
Sbjct: 27 RRSRNKPDPRKFWGNPDLLPKPIYGLSTPQVTNAIPSSLGRPPISGQETSSLKYFDAIYERSVGL 91
BLAST of mRNA_M-pyrifera_M_contig116412.3412.1 vs. uniprot
Match: A0A358A1Q1_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A358A1Q1_9ACTN) HSP 1 Score: 60.5 bits (145), Expect = 3.460e-10 Identity = 26/40 (65.00%), Postives = 34/40 (85.00%), Query Frame = 1
Query: 148 VQASPDVRAVLTSLGRPPLAGNETAGEHWFSMVYERAAFL 267
++ +PD +AV+ SLGR PL+G+ETA EHWFS+VYERAA L
Sbjct: 4 IEEAPDPKAVVRSLGRVPLSGHETAAEHWFSLVYERAAVL 43
BLAST of mRNA_M-pyrifera_M_contig116412.3412.1 vs. uniprot
Match: A0A2E4W0Q7_9ACTN (Uncharacterized protein n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A2E4W0Q7_9ACTN) HSP 1 Score: 58.2 bits (139), Expect = 1.120e-8 Identity = 26/65 (40.00%), Postives = 40/65 (61.54%), Query Frame = 1
Query: 73 RKSTPKVDPKEFWGDPDLLPERIDRVQASPDVRAVLTSLGRPPLAGNETAGEHWFSMVYERAAFL 267
R+S K DP++FWG+P+ LP+ I + P A+ +SLGRPP+ G ET + +Y+R+ L
Sbjct: 28 RRSRSKPDPRKFWGNPEALPKPIYGLSTPPVTNAIPSSLGRPPITGQETVSIKYLDAIYDRSVGL 92
BLAST of mRNA_M-pyrifera_M_contig116412.3412.1 vs. uniprot
Match: A0A2E3XMB6_9BACT (Uncharacterized protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A2E3XMB6_9BACT) HSP 1 Score: 56.6 bits (135), Expect = 3.870e-8 Identity = 25/65 (38.46%), Postives = 43/65 (66.15%), Query Frame = 1
Query: 73 RKSTPKVDPKEFWGDPDLLPERIDRVQASPDVRAVLTSLGRPPLAGNETAGEHWFSMVYERAAFL 267
R++ + DPK+FWG+ + LP + V+A +AVL SLG+PP++G E + + + +Y+R+A L
Sbjct: 25 RRNRNRTDPKKFWGNKEALPLPVHDVKAPSTTQAVLDSLGKPPISGQEVSSLEYLAKIYDRSAGL 89
BLAST of mRNA_M-pyrifera_M_contig116412.3412.1 vs. uniprot
Match: A0A2E4KF25_9ACTN (Uncharacterized protein n=2 Tax=unclassified Acidimicrobiaceae TaxID=667305 RepID=A0A2E4KF25_9ACTN) HSP 1 Score: 56.2 bits (134), Expect = 5.450e-8 Identity = 26/59 (44.07%), Postives = 36/59 (61.02%), Query Frame = 1
Query: 91 VDPKEFWGDPDLLPERIDRVQASPDVRAVLTSLGRPPLAGNETAGEHWFSMVYERAAFL 267
DPK+FWG+ D LP+ + V+ +AVL SLG+PP+ G E + VYER+A L
Sbjct: 31 ADPKKFWGNKDNLPQAVHDVKVPTATQAVLDSLGKPPIPGQEVPSLEYLGAVYERSAGL 89
BLAST of mRNA_M-pyrifera_M_contig116412.3412.1 vs. uniprot
Match: A0A2E1CRL1_9ACTN (Uncharacterized protein n=6 Tax=Actinobacteria TaxID=201174 RepID=A0A2E1CRL1_9ACTN) HSP 1 Score: 53.5 bits (127), Expect = 5.970e-7 Identity = 25/65 (38.46%), Postives = 39/65 (60.00%), Query Frame = 1
Query: 73 RKSTPKVDPKEFWGDPDLLPERIDRVQASPDVRAVLTSLGRPPLAGNETAGEHWFSMVYERAAFL 267
R++ + DPK+FWG+ + LP + V+ +AVL SLG+PP+ G E + +YER+A L
Sbjct: 25 RRNRNRTDPKKFWGNKETLPLPVHDVKVPSATQAVLDSLGKPPIPGQEVPSLEYLGEIYERSAGL 89 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116412.3412.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig116412.3412.1 >prot_M-pyrifera_M_contig116412.3412.1 ID=prot_M-pyrifera_M_contig116412.3412.1|Name=mRNA_M-pyrifera_M_contig116412.3412.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=89bp SRRKRNRPRNRGGGKQQSKNQGTQRKSTPKVDPKEFWGDPDLLPERIDRVback to top mRNA from alignment at M-pyrifera_M_contig116412:293..559+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig116412.3412.1 ID=mRNA_M-pyrifera_M_contig116412.3412.1|Name=mRNA_M-pyrifera_M_contig116412.3412.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=267bp|location=Sequence derived from alignment at M-pyrifera_M_contig116412:293..559+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig116412:293..559+ >mRNA_M-pyrifera_M_contig116412.3412.1 ID=mRNA_M-pyrifera_M_contig116412.3412.1|Name=mRNA_M-pyrifera_M_contig116412.3412.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=534bp|location=Sequence derived from alignment at M-pyrifera_M_contig116412:293..559+ (Macrocystis pyrifera P11B4 male)back to top |