mRNA_M-pyrifera_M_contig116401.3406.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig116401.3406.1 vs. uniprot
Match: A0A6I6AIF2_9PLAN (ABC transporter ATP-binding protein/permease n=5 Tax=Gimesia TaxID=1649453 RepID=A0A6I6AIF2_9PLAN) HSP 1 Score: 367 bits (941), Expect = 1.250e-120 Identity = 179/186 (96.24%), Postives = 182/186 (97.85%), Query Frame = 1
Query: 1 ALIHEPELLFLDEPTAGIDPVARRDLWDLLFELAGQGVTLFVTTHYMDEAERCSDVGYIYNSRLIVCGKPEELKQLSSVTPPGSARWEIDIPHPATWLGTYRDMDGVHDATLFGQTIHVLADQSLSEHDFVNRIPESQGTVQVRPITPSLEDVFVTLSRAEGLNHDEDTHTGTVPEATTTQASAAQ 558
ALIHEPELLFLDEPTAGIDPVARRDLWDLLFELAGQGVTLFVTTHYMDEAERCSDVGYIYNSRLIVCGKPEELKQLSSVTPPGSARWEIDIPHPATWLGTYR+MDGVHDATLFGQTIHVLADQSL+EHDF+NRIPESQGTVQVRPITPSLEDVFVTLSRAEGLNHDEDT TGTVPEA TTQ SA Q
Sbjct: 149 ALIHEPELLFLDEPTAGIDPVARRDLWDLLFELAGQGVTLFVTTHYMDEAERCSDVGYIYNSRLIVCGKPEELKQLSSVTPPGSARWEIDIPHPATWLGTYREMDGVHDATLFGQTIHVLADQSLTEHDFINRIPESQGTVQVRPITPSLEDVFVTLSRAEGLNHDEDTLTGTVPEANTTQPSAPQ 334
BLAST of mRNA_M-pyrifera_M_contig116401.3406.1 vs. uniprot
Match: A0A518FWY5_9PLAN (Putative ABC transporter ATP-binding protein YbhF n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518FWY5_9PLAN) HSP 1 Score: 311 bits (797), Expect = 3.490e-99 Identity = 156/186 (83.87%), Postives = 165/186 (88.71%), Query Frame = 1
Query: 1 ALIHEPELLFLDEPTAGIDPVARRDLWDLLFELAGQGVTLFVTTHYMDEAERCSDVGYIYNSRLIVCGKPEELKQLSSVTPPGSARWEIDIPHPATWLGTYRDMDGVHDATLFGQTIHVLADQSLSEHDFVNRIPESQGTVQVRPITPSLEDVFVTLSRAEGLNHDEDTHTGTVPEATTTQASAAQ 558
ALIHEPE+LFLDEPTAGIDPVARRDLWDLLFELAGQGVTLFVTTHYMDEAERCSDVGYIYNSRLIVCGKPEELKQL SVTPPG+ARWEID HPAT L T+R+MDGV DATLFGQTIHVLADQSL+E DF+NRI E Q TV VRPITPSLEDVFVTLSRAEGLNHD +T TVP+ T A+ Q
Sbjct: 149 ALIHEPEVLFLDEPTAGIDPVARRDLWDLLFELAGQGVTLFVTTHYMDEAERCSDVGYIYNSRLIVCGKPEELKQLPSVTPPGTARWEIDTVHPATRLSTFREMDGVRDATLFGQTIHVLADQSLTESDFINRIAEEQATVLVRPITPSLEDVFVTLSRAEGLNHDAET---TVPDTQTQDATEPQ 331
BLAST of mRNA_M-pyrifera_M_contig116401.3406.1 vs. uniprot
Match: A0A517VQS1_9PLAN (Transport permease protein n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VQS1_9PLAN) HSP 1 Score: 280 bits (715), Expect = 4.100e-87 Identity = 136/165 (82.42%), Postives = 149/165 (90.30%), Query Frame = 1
Query: 1 ALIHEPELLFLDEPTAGIDPVARRDLWDLLFELAGQGVTLFVTTHYMDEAERCSDVGYIYNSRLIVCGKPEELKQLSSVTPPGSARWEIDIPHPATWLGTYRDMDGVHDATLFGQTIHVLADQSLSEHDFVNRIPESQGTVQVRPITPSLEDVFVTLSRAEGLNH 495
ALIHEPE++FLDEPTAGIDPVARRDLWDLLFELAGQGVTLFVTTHYMDEAERCSDVGYIY++RLIVCGKP+ELKQL VTP G+ARWEI+ HPAT L T+R+MDGV DATLFGQTIHVLA Q LSE DF++ IP+ Q VQVRPITPSLEDVFVTLSRAE LN+
Sbjct: 149 ALIHEPEVVFLDEPTAGIDPVARRDLWDLLFELAGQGVTLFVTTHYMDEAERCSDVGYIYDARLIVCGKPDELKQLPRVTPLGTARWEIETAHPATKLTTFREMDGVRDATLFGQTIHVLASQQLSEADFISCIPDQQEAVQVRPITPSLEDVFVTLSRAEELNN 313
BLAST of mRNA_M-pyrifera_M_contig116401.3406.1 vs. uniprot
Match: A0A517XIL5_9PLAN (Transport permease protein n=11 Tax=Planctomycetaceae TaxID=126 RepID=A0A517XIL5_9PLAN) HSP 1 Score: 279 bits (714), Expect = 6.120e-87 Identity = 135/165 (81.82%), Postives = 148/165 (89.70%), Query Frame = 1
Query: 1 ALIHEPELLFLDEPTAGIDPVARRDLWDLLFELAGQGVTLFVTTHYMDEAERCSDVGYIYNSRLIVCGKPEELKQLSSVTPPGSARWEIDIPHPATWLGTYRDMDGVHDATLFGQTIHVLADQSLSEHDFVNRIPESQGTVQVRPITPSLEDVFVTLSRAEGLNH 495
ALIHEP+++FLDEPTAGIDPVARRDLWDLLF+LAGQGVTLFVTTHYMDEAERCSDVGYIYNSRLIVCGKP ELKQL +VTP G+ARWEI+ +PAT L T+R+M GV DATLFGQTIHVLADQSL E+DF ++P GTVQVR ITPSLEDVFVTLSRAE LNH
Sbjct: 149 ALIHEPQVVFLDEPTAGIDPVARRDLWDLLFQLAGQGVTLFVTTHYMDEAERCSDVGYIYNSRLIVCGKPNELKQLPTVTPDGTARWEIETANPATLLTTFREMPGVRDATLFGQTIHVLADQSLCENDFTRQVPHEFGTVQVRHITPSLEDVFVTLSRAEELNH 313
BLAST of mRNA_M-pyrifera_M_contig116401.3406.1 vs. uniprot
Match: A0A517RMP3_9PLAN (Putative ABC transporter ATP-binding protein YbhF n=2 Tax=Gimesia TaxID=1649453 RepID=A0A517RMP3_9PLAN) HSP 1 Score: 271 bits (692), Expect = 1.010e-83 Identity = 130/165 (78.79%), Postives = 148/165 (89.70%), Query Frame = 1
Query: 1 ALIHEPELLFLDEPTAGIDPVARRDLWDLLFELAGQGVTLFVTTHYMDEAERCSDVGYIYNSRLIVCGKPEELKQLSSVTPPGSARWEIDIPHPATWLGTYRDMDGVHDATLFGQTIHVLADQSLSEHDFVNRIPESQGTVQVRPITPSLEDVFVTLSRAEGLNH 495
ALIHEP++LFLDEPTAGIDPVARRDLWDLLF+LAGQGVTLFVTTHYMDEAERCSDVGYIY+SRLIVCGKP+ELK L SVTP G++R+EI+ PAT L T+R+++GV DATLFGQTIHVLADQ LSE D + +I + +VQ+RPITPSLEDVFVTLSRAEGLNH
Sbjct: 149 ALIHEPQVLFLDEPTAGIDPVARRDLWDLLFDLAGQGVTLFVTTHYMDEAERCSDVGYIYDSRLIVCGKPDELKHLPSVTPEGTSRFEIETVDPATKLATFRELEGVRDATLFGQTIHVLADQRLSETDLIEQIQKEDKSVQIRPITPSLEDVFVTLSRAEGLNH 313
BLAST of mRNA_M-pyrifera_M_contig116401.3406.1 vs. uniprot
Match: A0A1P8WEI4_9PLAN (Transport permease protein n=1 Tax=Fuerstiella marisgermanici TaxID=1891926 RepID=A0A1P8WEI4_9PLAN) HSP 1 Score: 238 bits (607), Expect = 2.850e-71 Identity = 112/160 (70.00%), Postives = 133/160 (83.12%), Query Frame = 1
Query: 1 ALIHEPELLFLDEPTAGIDPVARRDLWDLLFELAGQGVTLFVTTHYMDEAERCSDVGYIYNSRLIVCGKPEELKQLSSVTPPGSARWEIDIPHPATWLGTYRDMDGVHDATLFGQTIHVLADQSLSEHDFVNRIPESQGTVQVRPITPSLEDVFVTLSRA 480
+LIHEP+++FLDEPTAGIDPVARR LWDLLFEL+G+GVTLFVTTHYMDEAERC+DVGYIYNSRL+VCGKP+ELKQL VTP G+ RWE+++ HPAT L R ++GV DATLFGQTIHVL+D + S ++ + V+ R ITPSLEDVFVTLSRA
Sbjct: 150 SLIHEPDVIFLDEPTAGIDPVARRQLWDLLFELSGKGVTLFVTTHYMDEAERCTDVGYIYNSRLLVCGKPDELKQLPDVTPTGTQRWELEVNHPATHLQQLRSLEGVRDATLFGQTIHVLSDDATSPPTMIDHLGLPPSEVEARSITPSLEDVFVTLSRA 309
BLAST of mRNA_M-pyrifera_M_contig116401.3406.1 vs. uniprot
Match: A0A5C9BCI7_9BACT (ABC-2 type transport system ATP-binding protein (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A5C9BCI7_9BACT) HSP 1 Score: 226 bits (576), Expect = 1.530e-69 Identity = 107/160 (66.88%), Postives = 130/160 (81.25%), Query Frame = 1
Query: 1 ALIHEPELLFLDEPTAGIDPVARRDLWDLLFELAGQGVTLFVTTHYMDEAERCSDVGYIYNSRLIVCGKPEELKQLSSVTPPGSARWEIDIPHPATWLGTYRDMDGVHDATLFGQTIHVLADQSLSEHDFVNRIPESQGTVQVRPITPSLEDVFVTLSRA 480
ALIHEP+++FLDEPTAGIDPVARR LWDLLF+L+ QGVTLFVTTHYMDEAERC+ VGYIY+SRLIVCG P++LKQL VTPPG+ R E+D+ P T L R +DG+ DATLFGQ+IH+LA L+E + + R+ + T +RPI PSLEDVFVTL+RA
Sbjct: 143 ALIHEPDVVFLDEPTAGIDPVARRSLWDLLFQLSAQGVTLFVTTHYMDEAERCTSVGYIYSSRLIVCGDPDDLKQLPDVTPPGTRRLELDVASPTTRLAELRKLDGIVDATLFGQSIHLLAKDELTESELLRRLNLTSETTPLRPIAPSLEDVFVTLTRA 302
BLAST of mRNA_M-pyrifera_M_contig116401.3406.1 vs. uniprot
Match: A0A257W7J1_9BACT (ABC transporter ATP-binding protein (Fragment) n=1 Tax=Planctomycetales bacterium 12-60-4 TaxID=1970541 RepID=A0A257W7J1_9BACT) HSP 1 Score: 225 bits (573), Expect = 4.800e-68 Identity = 109/162 (67.28%), Postives = 127/162 (78.40%), Query Frame = 1
Query: 1 ALIHEPELLFLDEPTAGIDPVARRDLWDLLFELAGQGVTLFVTTHYMDEAERCSDVGYIYNSRLIVCGKPEELKQLSSVTPPGSARWEIDIPHPATWLGTYRDMDGVHDATLFGQTIHVLADQSLSEHDFVNRIPESQGTVQVRPITPSLEDVFVTLSRAEG 486
ALIHEPE+LFLDEPTAGIDPVARRDLWDLLF+L+ +GVT FVTTHYMDEAERC+DV YI+ SRLIVCGKPEELK L +VTPPG+ RW++D+ P L R MDGV DATLFGQ +HVL+++ L+ DF + E R I P+LEDVFVTLSRA G
Sbjct: 84 ALIHEPEVLFLDEPTAGIDPVARRDLWDLLFDLSARGVTQFVTTHYMDEAERCTDVAYIHMSRLIVCGKPEELKSLPTVTPPGTRRWQLDLQAPTQQLSRLRQMDGVQDATLFGQEVHVLSEERLTPADFGQYLGEPVTEHNARLINPTLEDVFVTLSRASG 245
BLAST of mRNA_M-pyrifera_M_contig116401.3406.1 vs. uniprot
Match: A0A5C5VSY3_9BACT (Putative ABC transporter ATP-binding protein YbhF n=1 Tax=Phycisphaerae bacterium RAS1 TaxID=2528034 RepID=A0A5C5VSY3_9BACT) HSP 1 Score: 216 bits (550), Expect = 8.150e-67 Identity = 108/161 (67.08%), Postives = 126/161 (78.26%), Query Frame = 1
Query: 1 ALIHEPELLFLDEPTAGIDPVARRDLWDLLFELAGQGVTLFVTTHYMDEAERCSDVGYIYNSRLIVCGKPEELKQLSSVTPPGSARWEIDIPHPATWLGTYRDMDGVHDATLFGQTIHVLADQSLSEHDFVNRIPESQGTVQVRPITPSLEDVFVTLSRAE 483
ALIHEPE+LFLDEPTAGIDPVARRDLWDLLFELAG GVTLFVTTHYMDEAERC+ VGYIY +RLIVCG+P+ELK L VTPP + R E+ AT L + GVHDATLFG +H+L D +L++ + R+ S G VRPI+PSLEDVFVTLSR++
Sbjct: 164 ALIHEPEVLFLDEPTAGIDPVARRDLWDLLFELAGSGVTLFVTTHYMDEAERCTHVGYIYLARLIVCGRPDELKNLPDVTPPRTRRVELTCSAAATALRPLKQAPGVHDATLFGDALHLLIDAALTDDALLKRLDPSLGAA-VRPISPSLEDVFVTLSRSQ 323
BLAST of mRNA_M-pyrifera_M_contig116401.3406.1 vs. uniprot
Match: A0A517N4T7_9BACT (Transport permease protein n=1 Tax=Rubripirellula lacrimiformis TaxID=1930273 RepID=A0A517N4T7_9BACT) HSP 1 Score: 219 bits (557), Expect = 7.460e-64 Identity = 112/175 (64.00%), Postives = 134/175 (76.57%), Query Frame = 1
Query: 1 ALIHEPELLFLDEPTAGIDPVARRDLWDLLFELAGQGVTLFVTTHYMDEAERCSDVGYIYNSRLIVCGKPEELKQLSSVTPPGSARWEIDIPHPATWLGTYRDMDGVHDATLFGQTIHVLADQSLSEHDFVNRI--PESQGTVQVRPITPSLEDVFVTLS------RAEGLNHDE 501
+LIHEPE+LFLDEPTAGIDPVARR LWDLLFEL+G+GVTLFVTTHYMDEAERCS+VGYIY SRL+V GKP +LKQL V P G+ R+EI +P PA +L R + +HDATLFG+TIH+L DQS S ++++ P S+ T R I PSLEDVFVTL+ AEG+N DE
Sbjct: 150 SLIHEPEVLFLDEPTAGIDPVARRHLWDLLFELSGRGVTLFVTTHYMDEAERCSEVGYIYQSRLLVLGKPHQLKQLPEVNPAGTQRYEIRLPSPAKYLAALRQVPEIHDATLFGETIHLLMDQSRSPEQILDQLDLPPSEDT---REIAPSLEDVFVTLTSNAEKRNAEGVNPDE 321 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116401.3406.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig116401.3406.1 >prot_M-pyrifera_M_contig116401.3406.1 ID=prot_M-pyrifera_M_contig116401.3406.1|Name=mRNA_M-pyrifera_M_contig116401.3406.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=186bp ALIHEPELLFLDEPTAGIDPVARRDLWDLLFELAGQGVTLFVTTHYMDEAback to top mRNA from alignment at M-pyrifera_M_contig116401:3..560- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig116401.3406.1 ID=mRNA_M-pyrifera_M_contig116401.3406.1|Name=mRNA_M-pyrifera_M_contig116401.3406.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=558bp|location=Sequence derived from alignment at M-pyrifera_M_contig116401:3..560- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig116401:3..560- >mRNA_M-pyrifera_M_contig116401.3406.1 ID=mRNA_M-pyrifera_M_contig116401.3406.1|Name=mRNA_M-pyrifera_M_contig116401.3406.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1116bp|location=Sequence derived from alignment at M-pyrifera_M_contig116401:3..560- (Macrocystis pyrifera P11B4 male)back to top |