mRNA_M-pyrifera_M_contig1164.3404.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig1164.3404.1
Unique NamemRNA_M-pyrifera_M_contig1164.3404.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig1164.3404.1 vs. uniprot
Match: A0A6H5L3X9_9PHAE (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3X9_9PHAE)

HSP 1 Score: 653 bits (1685), Expect = 1.090e-229
Identity = 392/562 (69.75%), Postives = 424/562 (75.44%), Query Frame = 1
Query:    1 MSISGARVLLRLTKAVSFPGRLRSVAAVHHGGSRAASSASGVTLVR-------HSRVVGQTWRGAGSWRRRRGRSGLGAAVLLPSQSARGLASGVDYTVVNMPALSPTMESGSVTEWHKSPGDELAAGDVICDVETDKATVAFDVQDDGVLAKIISAAGSDEVVVGSPVAIIVEDAEAYAAFVKADAAGEV---ALGGTAPVGAPAPAAAVAVEEEIADKGVSTASGDHAPTRSVAAEFLFAPSARHMAQSKGIDASVLQGTGKGGRITKADLVTALAKGVVFPSTQASGSSGSVVSQAASPVASGPAPVAAAVQSPPPPRPLSPAVAVSSSSGDYEDHPANNIKKITAKRLTQSKAEVPHLYVSMACEVDALMAFRKSLKKEHDVKVSVNDFIIRSAALALRDVPEANAMWTGGARRSGESIDISVAVATPTGLITPIVTNADRRGLSNISGKVRDLATRARDRQLKPEEFQGGSFTVSNLGMFGINEFSAVINMPQACILAVGGGSPTVKPGRQAGDKPRVCSEVTVKLSADRRVVDEAIAAQLLQSFKHYMETPELLMM 1656
            M+ SG RVLLRL K  + P RLR   A    G R   SASGVT          H   + ++   A  WRR R     G  +LLP Q+AR L SGVD+TVVNMPALSPTMESG+VTEWHKSPGDEL+AGDVICDVETDKATVAFDVQDDGVLA+IIS AGS EV VGSPVA+IVED +AYAAFVKADAAGEV   ALGG                              + P RSV   FLF+P+ARHMAQSKGIDAS L+GTGKGGRITK DLV A+AKGV FP+   + SS                     V         +P V  SSSSGD+ D PANNIKKITAKRLTQSKAEVPHLYVSMACEVD LMAFRK+L+KEHDVKVSVND IIRSAALALRDVPEANA W+GGAR+S ESIDISVAVATPTGLITPIVT+AD+RGLSNISGKVRDLATRARDRQLKPEEFQGGSFTVSNLGMFGINEFSAVINMPQACILAVGGG+P VKPGR+AGDKPRVCSEVTV+LSADRRVVDEAIAAQLLQSFKHYMETPELL+M
Sbjct:    2 MATSGVRVLLRLCKTGAVP-RLRPAEATWQHGRR---SASGVTTTTRQSNSSSHPGHILRSAPAAAPWRRARA---TGFGMLLPRQTARALTSGVDFTVVNMPALSPTMESGTVTEWHKSPGDELSAGDVICDVETDKATVAFDVQDDGVLARIISEAGSGEVSVGSPVAVIVEDGDAYAAFVKADAAGEVDFAALGGXXXXXXXXXXXXXXXXXXXXXXXXXXX-XSNLPERSVPEAFLFSPAARHMAQSKGIDASSLEGTGKGGRITKTDLVLAMAKGVEFPAAAKAASSQXXXXXXXXXXXXXXXXXXXXV---------APPVVPSSSSGDFVDEPANNIKKITAKRLTQSKAEVPHLYVSMACEVDGLMAFRKTLQKEHDVKVSVNDIIIRSAALALRDVPEANAKWSGGARQSSESIDISVAVATPTGLITPIVTDADQRGLSNISGKVRDLATRARDRQLKPEEFQGGSFTVSNLGMFGINEFSAVINMPQACILAVGGGAPKVKPGREAGDKPRVCSEVTVRLSADRRVVDEAIAAQLLQSFKHYMETPELLLM 546          
BLAST of mRNA_M-pyrifera_M_contig1164.3404.1 vs. uniprot
Match: D7FM36_ECTSI (Dihydrolipoamide S-acetyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM36_ECTSI)

HSP 1 Score: 621 bits (1601), Expect = 2.100e-207
Identity = 375/560 (66.96%), Postives = 401/560 (71.61%), Query Frame = 1
Query:    1 MSISGARVLLRLTKAVSFPGRLRSVAAVHHGGSRAASSASGVTLVRHSRVVGQTWRG--------AGSWRRRRGRSGLGAAVLLPSQSARGLASGVDYTVVNMPALSPTMESGSVTEWHKSPGDELAAGDVICDVETDKATVAFDVQDDGVLAKIISAAGSDEVVVGSPVAIIVEDAEAYAAFVKADAAGEVALGGTAPVGAPAPAAAVAVEEEIADKGVSTASGDHAPTRSVAAEFLFAPSARHMAQSKGIDASVLQGTGKGGRITKADLVTALAKGVVFPSTQASGSSGSVVSQAASPVASGPAPVAAAVQSPPPPRPLSPAVAVSSSSGDYEDHPANNIKKITAKRLTQSKAEVPHLYVSMACEVDALMAFRKSLKKEHDVKVSVNDFIIRSAALALRDVPEANAMWTGGARRSGESIDISVAVATPTGLITPIVTNADRRGLSNISGKVRDLATRARDRQLKPEEFQGGSFTVSNLGMFGINEFSAVINMPQACILAVGGGSPTVKPGRQAGDKPRVCSEVTVKLSADRRVVDEAIAAQLLQSFKHYMETPELLMM 1656
            M+ SGARVLLRL K  + P RLR   A    G R   SASGVT          +  G        A  WRR R     G  + LP Q+AR L SGVD+TVVNMPALSPTMESG+VTEWHKSPGDEL+AGDVICDVETDKATVAFDVQDDGVLA+IIS AGS EV VGSPVA+IVEDA+AYAAFVKADAAGE                                                         SKGIDAS L+GTGKGGRITKADLV ALAKGV FP+   + SS +                        P          SSSSGD+ D PANNIKKITAKRLTQSKAEVPHLYVSMACEVD LMAFRK+L+KEHDVKVSVND IIRSAALALRDVPEANA W+GGAR+SGESIDISVAVATPTGLITPIVT+AD+RGLSNISGKVRDLATRARDRQLKPEEFQGGSFTVSNLGMFGINEFSAVINMPQACILAVGGG+P VKPGR+AGDKPRVCSEVTV+LSADRRVVDEAIAAQLLQSFKHYMETPELL+M
Sbjct:  777 MATSGARVLLRLRKTGAVP-RLRPAEATWQHGRR---SASGVTTTARQSSSSSSHAGHFLRSAPAAAPWRRARA---TGIGMQLPRQTARALTSGVDFTVVNMPALSPTMESGTVTEWHKSPGDELSAGDVICDVETDKATVAFDVQDDGVLARIISEAGSGEVSVGSPVAVIVEDADAYAAFVKADAAGE---------------------------------------------------------SKGIDASSLEGTGKGGRITKADLVLALAKGVEFPAAAKAASSQAXXXXXXXXXXXXXXXXXXXXXXXXP----------SSSSGDFVDEPANNIKKITAKRLTQSKAEVPHLYVSMACEVDGLMAFRKALQKEHDVKVSVNDIIIRSAALALRDVPEANAKWSGGARQSGESIDISVAVATPTGLITPIVTDADQRGLSNISGKVRDLATRARDRQLKPEEFQGGSFTVSNLGMFGINEFSAVINMPQACILAVGGGAPKVKPGREAGDKPRVCSEVTVRLSADRRVVDEAIAAQLLQSFKHYMETPELLLM 1262          
BLAST of mRNA_M-pyrifera_M_contig1164.3404.1 vs. uniprot
Match: A0A7S2R7Y6_9STRA (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R7Y6_9STRA)

HSP 1 Score: 421 bits (1082), Expect = 3.260e-139
Identity = 254/469 (54.16%), Postives = 322/469 (68.66%), Query Frame = 1
Query:  265 DYTVVNMPALSPTMESGSVTEWHKSPGDELAAGDVICDVETDKATVAFDVQDDGVLAKIISAAGSDEVVVGSPVAIIVEDAEAYAAFVKADAAGEVALGGTAPVGAPAPAAAVAVEEEIADKGVSTASGDHAPT--RSVAAEFLFAPSARHMAQSKGIDASVLQGTGKGGRITKADLVTALAKGVVFPSTQASGSSGSVVSQAASPVASGPAPVAAAVQSPPPPRPLS-PAVAVSSSSGDYEDHPANNIKKITAKRLTQSKAEVPHLYVSMACEVDALMAFRKSLKKEHDVKVSVNDFIIRSAALALRDVPEANAMWTGG--ARRSGESIDISVAVATPTGLITPIVTNADRRGLSNISGKVRDLATRARDRQLKPEEFQGGSFTVSNLGMFGINEFSAVINMPQACILAVGGGSPTVKPGRQAGDKPRVCSEVTVKLSADRRVVDEAIAAQLLQSFKHYMETPELLMM 1656
            D++VV+MPALSPTME GS++ W K PGD + AG+ + +VETDKA V F+ QDD VLAK++  AG  E  VG P+AI V D  A+ AF  ADAAG V+L    P     PAA  A          STAS    P   R V  EFL  P+A H+A+S+GIDA+ L G+GKGGRITK D++ ALA G+ FP+      S   ++ AA    + PA    A  + P    LS PA  V+ +   +ED PA++++K+ A+RLT+SKA VPHLYV+M  E+DAL+ FRK LK E DV VSVND +IR+ ALALRDVPEANA +     A+R  +SID+SVAVATPTGLITPIVT  DRRGLS+IS  VRDLA RA++ +L PEE+QGG+FTVSNLGMFGI+EFSAVIN PQACI+A+GGG   V        +PRV + +TVK+S DRRV+DEA A+Q LQ+F+ Y+E P LL++
Sbjct:   37 DFSVVHMPALSPTMERGSISSWAKQPGDSIEAGETLAEVETDKAVVGFEYQDDAVLAKVLDPAGGTEFTVGDPIAITVVDHAAFEAFQTADAAGLVSL----PSAGNTPAAVSATXXXX-----STASAPTGPVEGRQVTDEFLLMPAAAHLARSRGIDATALAGSGKGGRITKGDILNALASGMTFPALATGAVSRPALTAAAEASTAAPAAAPLASSTVPTGETLSMPATPVTDA--PFEDAPASSMRKVIARRLTESKATVPHLYVAMESELDALLRFRKYLKDECDVSVSVNDLVIRAVALALRDVPEANASFDAAQSAKRFNDSIDVSVAVATPTGLITPIVTGVDRRGLSDISSAVRDLAGRAQEGKLMPEEYQGGTFTVSNLGMFGISEFSAVINPPQACIMAIGGGVKRVV-ADSMDSEPRVATSMTVKMSCDRRVIDEATASQYLQAFRSYVEEPTLLLL 493          
BLAST of mRNA_M-pyrifera_M_contig1164.3404.1 vs. uniprot
Match: A0A7S2ALJ9_9STRA (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ALJ9_9STRA)

HSP 1 Score: 414 bits (1065), Expect = 4.420e-136
Identity = 254/483 (52.59%), Postives = 319/483 (66.05%), Query Frame = 1
Query:  262 VDYTVVNMPALSPTMESGSVTEWHKSPGDELAAGDVICDVETDKATVAFDVQDDGVLAKIISAAGSDEVVVGSPVAIIVEDAEAYAAFVKADAAGEVALGGTAPVGAPAPAAAVAVEEEIADKG-VSTASGDHAPTRSVAAEFLFAPSARHMAQSKGIDASVLQGTGKGGRITKADLVTALAKGVVFPSTQASGSSGSVVSQAASPVASGPAPVAAAVQSPPPPRPLSPAV----------------AVSSSSGDYEDHPANNIKKITAKRLTQSKAEVPHLYVSMACEVDALMAFRKSLKKEHDVKVSVNDFIIRSAALALRDVPEANAMWTGGARR--SGESIDISVAVATPTGLITPIVTNADRRGLSNISGKVRDLATRARDRQLKPEEFQGGSFTVSNLGMFGINEFSAVINMPQACILAVGGGSPTVKPGRQAGDKPRVCSE--VTVKLSADRRVVDEAIAAQLLQSFKHYMETPEL 1647
            V+Y  V MPALSPTMESG++ EW K PG+E+AAGDV+C VETDKAT+AF++QDD VLAK +  AG + + +G+ VAI V+D  AY AF+ ADAAGE+++          PAA  AV+E     G VS+ +   A TR+VA EFL  P+ARHM++SKG+D   L GTGKGGRITK D++ A+ +GV  P                  +AS  AP  AAV SP P    +PA                 A  +S   Y D PA+ ++K+ A RLTQSKAE PH YVS+   +D +M  RK+LK E DV VSVND IIR A LALRDVPEANA W    +   +  ++DISVAVATPTGL+TPIVT  D +GL  I+G VRDLATRARD +L PEE+QGGSFT+SNLGMFG++EFSA+INMPQACI+AVGGG   +    Q  D+  +  E  +T +LS D RVVD A+AAQ LQ+F+ YME P+L
Sbjct:   75 VEYVTVVMPALSPTMESGTIAEWSKQPGEEIAAGDVLCQVETDKATMAFEMQDDAVLAKQLVPAGDESINIGTAVAITVDDMAAYEAFLAADAAGEISIDAN-----DGPAAGGAVDEVETTTGTVSSEAAMIASTRTVADEFLLTPAARHMSESKGLDVRGLAGTGKGGRITKGDVIHAINEGVTLPL-----------------LASSSAPSVAAVTSPAPSVSSTPAXXXXXXXXXXXMMDLPPAECTSGAGYSDSPASGMRKVIASRLTQSKAEAPHAYVSIEARLDPIMKLRKTLK-EGDVNVSVNDLIIRCAGLALRDVPEANASWDAKTQSVVTNPNVDISVAVATPTGLMTPIVTGVDGKGLGEINGAVRDLATRARDGKLMPEEYQGGSFTISNLGMFGVSEFSAIINMPQACIMAVGGGERRLV---QKKDEEGLSIETVMTARLSCDSRVVDSAVAAQFLQAFQGYMEQPKL 531          
BLAST of mRNA_M-pyrifera_M_contig1164.3404.1 vs. uniprot
Match: A0A835ZCE2_9STRA (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCE2_9STRA)

HSP 1 Score: 417 bits (1071), Expect = 1.210e-133
Identity = 257/469 (54.80%), Postives = 306/469 (65.25%), Query Frame = 1
Query:  268 YTVVNMPALSPTMESGSVTEWHKSPGDELAAGDVICDVETDKATVAFDVQDDGVLAKIISAAGSDEVVVGSPVAIIVEDAEAYAAFVKADAAGEVAL--GGTAPVGAPAPAAAVAVEEEIADKGVSTASGDHAPTRSVAAEFLFAPSARHMAQSKGIDASVLQGTGKGGRITKADLVTALAKGVVFPSTQASGSSGSVVSQAASPVASGPAPVAAAVQSPPPPRPLSPAVAVSSS---------SGDYEDHPANNIKKITAKRLTQSKAEVPHLYVSMACEVDALMAFRKSLKKEHDVKVSVNDFIIRSAALALRDVPEANAMWTG--GARRSGESIDISVAVATPTGLITPIVTNADRRGLSNISGKVRDLATRARDRQLKPEEFQGGSFTVSNLGMFGINEFSAVINMPQACILAVGGGSPTVKPGRQ-----AGDKPRVCSEVTVKLSADRRVVDEAIAAQLLQSF 1620
            +TVVNMPALSPTME+G++T+WH  PG  LA GDV+CDVETDKATVAF+VQ+DGVLAKI+   G  EV VGSPVA+ VED  AY AF KADAAG +    G  AP    +   A A               +    R+V  EF ++P+ARH+AQSKGID   L G+G+GGR+TK+DL+ ALA G  FP   A   + +  + AA+P                                       + D+ D PANNI+K+ AKRL QSKA VPHLYVS  CE+DAL+A RK L   H  KVSVND +IR+AALALRDVPEANA W+   GA     ++D+SVAVATPTGLITPIVT A  RGL NIS  VRDLA RA++ +LKPEEFQGG+FT+SNLGMFGI EFSAVIN PQACI+AVGGG   V PG +     A   PRV + +T KLSADRRVVDEA+AAQ LQ F
Sbjct:   79 FTVVNMPALSPTMETGTITKWHAQPGTALAPGDVLCDVETDKATVAFEVQEDGVLAKILVQEGGGEVKVGSPVAVTVEDEAAYDAFTKADAAGSLPYFSGEDAPSATDSQPQAPAAXXXXXXXXXXXXXAN----RTVPEEFAYSPAARHLAQSKGIDIVSLAGSGRGGRVTKSDLIKALASGTEFPKLGAGRHAATEPAAAAAPTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADHTDIPANNIRKVIAKRLAQSKATVPHLYVSAECELDALLALRKELAARHGAKVSVNDLVIRAAALALRDVPEANAQWSARDGAAALQRAVDVSVAVATPTGLITPIVTRAAERGLLNISAAVRDLAGRAKEGKLKPEEFQGGTFTISNLGMFGIAEFSAVINPPQACIMAVGGGVRRVVPGARDAATGARAPPRVATVMTAKLSADRRVVDEAVAAQFLQQF 543          
BLAST of mRNA_M-pyrifera_M_contig1164.3404.1 vs. uniprot
Match: A0A7S4SV80_9STRA (Acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SV80_9STRA)

HSP 1 Score: 409 bits (1052), Expect = 1.430e-133
Identity = 245/488 (50.20%), Postives = 328/488 (67.21%), Query Frame = 1
Query:  232 SQSARGLASGVDYTVVNMPALSPTMESGSVTEWHKSPGDELAAGDVICDVETDKATVAFDVQDDGVLAKII-SAAGSDEVVVGSPVAIIVEDAEAYAAF---VKADAAGEVALGGTAPVGAPAPAAAVAVEEEIADKGVSTASGDHAPTRSVAAEFLFAPSARHMAQSKGIDASVLQGTGKGGRITKADLVTALAKGVVFPSTQASGSSGSVVSQAASPVASGPAPVAAAVQSPPPPRPLSPAVAVSSSSGDYEDHPANNIKKITAKRLTQSKAEVPHLYVSMACEVDALMAFRKSLKKEHDVKVSVNDFIIRSAALALRDVPEANAMWTG--GARRSGESIDISVAVATPTGLITPIVTNADRRGLSNISGKVRDLATRARDRQLKPEEFQGGSFTVSNLGMFGINEFSAVINMPQACILAVGGGSPTVKPG-------RQAGDKPRVCSEVTVKLSADRRVVDEAIAAQLLQSFKHYMETPELLMM 1656
            S +A  L+S   +T+  MPALSPTME+G++++W+KS G+E +AGD++C++ETDKATV F+ QDDGVLAKI+   + + ++ +G P+ ++VE+A+  AAF   V  D AG          GA AP AA       A     TA  +    R VA EF+  PSARH++QS+G+DA+VL G+GKGGR+TK D++ ALA G   P   +S  + + V   A+   +  AP  AA        P+   +   S+ G YED P NN++K+ AKRLT+SK +VPH Y SM  E+D +++ RK L  +HDVKVSVND IIRS+ALALRDVPE NA      G  R+ E+IDIS+AVATPTGLITPIV + D++GLS+I+  VRDLA RAR+ +LKPEE+QGG+F +SNLGMFGI+EFSAVIN PQA ILAVGGG+  + P        ++   KP + + +T +LSADRRVVDEA AA  L +FKHY+  P LLM+
Sbjct:  104 SSTASVLSSYPPHTLFPMPALSPTMETGTISKWNKSEGEEFSAGDILCEIETDKATVDFEAQDDGVLAKILREGSNAVDLPIGVPICVVVEEADELAAFKDFVLDDGAG----------GAAAPTAAQEEAPAAASAPTPTAQAESVVNRDVADEFVLMPSARHLSQSRGVDATVLVGSGKGGRVTKGDVLAALANGTEMPPLTSSVLASAPVDTPAAATQAAAAPAKAASS------PVVATIPEISTQGSYEDVPNNNMRKVIAKRLTESKRDVPHFYTSMEVELDEVLSLRKMLVSKHDVKVSVNDLIIRSSALALRDVPEVNATIDSKTGNLRARENIDISIAVATPTGLITPIVPHTDQKGLSDITNSVRDLAGRAREGKLKPEEYQGGTFCISNLGMFGIDEFSAVINPPQAAILAVGGGTKRIVPAPYVDGVAKEDQPKPVIRTVMTARLSADRRVVDEATAALFLSAFKHYLSKPHLLML 575          
BLAST of mRNA_M-pyrifera_M_contig1164.3404.1 vs. uniprot
Match: A0A812V1C5_SYMMI (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812V1C5_SYMMI)

HSP 1 Score: 386 bits (992), Expect = 1.030e-125
Identity = 236/497 (47.48%), Postives = 317/497 (63.78%), Query Frame = 1
Query:  220 VLLPSQSAR----------GLASGVDYTVVNMPALSPTMESGSVTEWHKSPGDELAAGDVICDVETDKATVAFDVQDDGVLAKIISAAGSDEVVVGSPVAIIVEDAEAYAAFVKADAAGEVALGGTAPVGAPAPAAAVAVEEEIADKGVSTASGDHAPTRSVAAEFLFAPSARHMAQSKGIDASVLQGTGKGGR-ITKADLVTALAKGVVFP--STQASGSSGSVVSQAASPVASGP---APVAAAVQSPPPPRPLSPAVAVSSSSGDYEDHPANNIKKITAKRLTQSKAEVPHLYVSMACEVDALMAFRKSLKKEHDVKVSVNDFIIRSAALALRDVPEANAMWTGGARRSG--ESIDISVAVATPTGLITPIVTNADRRGLSNISGKVRDLATRARDRQLKPEEFQGGSFTVSNLGMFGINEFSAVINMPQACILAVGGGSPTVKPGRQAGDKPRVCSEVTVKLSADRRVVDEAIAAQLLQSFKHYMETPELLMM 1656
            VLLP+ S R            ++ +  T + MP+LSPTM  G+++ W+K+PG+ L AGD++CDVETDKA+V F+VQDDGVLAKI+  AG  EV  G P+A++VED   Y  F+K                 PA A  VAV    A    + +    +   S A     +P+ARHM QS+ +D S + G+ KGGR ITK D++ A+  G   P  STQ   +  + V+  ASP    P   A V A VQ P            S+  G Y D P +N++K+ AKRL++SK  VPHLY ++ CE+D L+A RK+LKK+  V VSVND +I+S A+ALRDVPE N  W     R    +++DISVAVATP GLITPI+T+AD+ GLS I+ KV+DLATRARD +LKP+E+QGG+FT+SNLG+FGI+ FSAVIN PQACILAVGGG   V       ++PR+ + +TV+LS+DRRVVDEA A+Q LQ FK+Y+  P+L+++
Sbjct:   21 VLLPALSRRLARPVSMALAHFSTEISITKLPMPSLSPTMTHGTISSWNKAPGEALKAGDILCDVETDKASVGFEVQDDGVLAKILVDAGGAEVQCGQPIALMVEDDADYQTFLKL----------------PADAYPVAVPAAAASPPAAPSHTPSSAAPSFAGHVQLSPAARHMVQSRSLDVSAVHGSSKGGRVITKGDVIQAVKAGTARPGASTQTRATPATAVAAVASPPTPIPQTAATVPATVQDP-----------SSNIGGLYVDVPNSNMRKVIAKRLSESKQTVPHLYTTIECEIDDLLAMRKALKKDFGVNVSVNDVVIKSVAMALRDVPECNGKWVPAEGRPAFNDAVDISVAVATPNGLITPILTSADQLGLSAINSKVKDLATRARDGKLKPQEYQGGTFTISNLGLFGISSFSAVINPPQACILAVGGGIERVVAPAPGKEQPRIVTTMTVQLSSDRRVVDEATASQFLQVFKYYLSNPKLVVL 490          
BLAST of mRNA_M-pyrifera_M_contig1164.3404.1 vs. uniprot
Match: A0A7R9YCE9_9STRA (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCE9_9STRA)

HSP 1 Score: 379 bits (972), Expect = 2.320e-123
Identity = 237/464 (51.08%), Postives = 303/464 (65.30%), Query Frame = 1
Query:  295 SPTMESGSVTEWHKSPGDELAAGDVICDVETDKATVAFDVQDDGVLAKIISAAGSDEVVVGSPVAIIVEDA---EAYAAFVKADAAGEVALGGTAPVGAPAPAAAVAVEEEIADKGVSTAS--GDHAPTRSVAAEFLFAPSARHMAQSKGIDASVLQGTGKGGRITKADLVTALAKGVVFPST---QASGSSGSVVSQAASPVASGPAPVAAAVQSPPPPRPLSPAVAVSSSSGDYEDHPANNIKKITAKRLTQSKAEVPHLYVSMACEVDALMAFRKSLKKEHDVKVSVNDFIIRSAALALRDVPEANAMWTGGAR--RSGESIDISVAVATPTGLITPIVTNADRRGLSNISGKVRDLATRARDRQLKPEEFQGGSFTVSNLGMFGINEFSAVINMPQACILAVGGGSPTVKPGRQAGDKPRVCSEVTVKLSADRRVVDEAIAAQLLQSFKHYMETPELLMM 1656
            SPTMESG+++ W    G   +AGDVIC+VETDKATV F+ QDDG LAK++  AG+DE+ VG P+ +I EDA   +A+  F   DA GEV    TAP     PAA  A           +A+     AP R+V++EFL +P+ARH   S+G+DAS LQGTGKGGR+TK D++ A++ GV  P     QA+ +S S    A  P A+  APV  A         LS    V  +   YED  A+ ++K+ +KRLT+SKA+VPH YVSMAC++D LMA R  LK   D+KVSVND +IR AALALRDVP+ NA W    +     E++DISVAVATP GLITPIV  AD+ G  +I+ KVRDLA RAR+ +L PEE+QGGSF++SNLGMF I+ FSAVIN PQ  I+AVG G P + P  +AG KP   + + V+LS DRRV DEA AA+ LQ FK Y+E P  L++
Sbjct:    1 SPTMESGTISSWEVEVGGGFSAGDVICEVETDKATVGFEAQDDGYLAKVLVEAGTDEISVGHPICVITEDAPDVQAFEGFSLEDA-GEV----TAP-----PAAQEAEGSXXXXXXXXSAAQPAKQAPERTVSSEFLLSPAARHYTASRGLDASGLQGTGKGGRVTKEDVIKAVSSGVQLPKLGEKQAASTSASQSRAAGQPSAAFAAPVKVAFD-------LS---TVKKTDAPYEDTAASKMRKVISKRLTESKADVPHFYVSMACQLDNLMALRSRLKNSLDIKVSVNDVLIRCAALALRDVPKVNAKWNDKKKVVEPAEAVDISVAVATPNGLITPIVAGADKMGFGSITAKVRDLAGRAREGKLAPEEYQGGSFSISNLGMFDISVFSAVINPPQGAIMAVGSGMPVLDPTSEAG-KPTFKNVMQVQLSVDRRVADEAAAAEYLQVFKSYVEQPTSLLL 443          
BLAST of mRNA_M-pyrifera_M_contig1164.3404.1 vs. uniprot
Match: A0A7S2LCD3_9STRA (Acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LCD3_9STRA)

HSP 1 Score: 379 bits (973), Expect = 5.220e-123
Identity = 236/490 (48.16%), Postives = 312/490 (63.67%), Query Frame = 1
Query:  232 SQSA-RGLASGV-DYTVVNMPALSPTMESGSVTEWHKSPGDELAAGDVICDVETDKATVAFDVQDDGVLAKIISAAGSDEVVVGSPVAIIVEDAEAYAAFVKADAAGEVALGGTAPVGAPAPAAAVAVEEEIADKGVSTASGDHAPTRSVAAEFLFAPSARHMAQSKGIDASVLQGTGKGGRITKADLVTALAKGVVFPSTQA--------SGSSGSVVSQAASPVASGPAPVAAAVQSPPPPRPLSPAVAVSSSSGDYEDHPANNIKKITAKRLTQSKAEVPHLYVSMACEVDALMAFRKSLKKEHDVKVSVNDFIIRSAALALRDVPEANAMWTGGARR--SGESIDISVAVATPTGLITPIVTNADRRGLSNISGKVRDLATRARDRQLKPEEFQGGSFTVSNLGMFGINEFSAVINMPQACILAVGGGSPTVKP-----GRQAGDKPRVCSEVTVKLSADRRVVDEAIAAQLLQSFKHYMETPELL 1650
            SQSA R L+S +  + VV +PALSPTMESG++ +W    G     GDV+C+VETDKATV F+ QDDGVLAKI+  +GS ++ VG+PV I+VED +  A+F   +   +V+        A     AV    +   + V T S    P+R +  +++ +P+ARH++QSKG+DA+VL GTGKGGR+TK D++  L      P   A                  AA+PV    A V         P P           G +ED P NN++K+ AKRLT+SK +VPH Y S+  E+D ++A RK L  +H+VKVSVND II+S+ALALRD+   NA +          + +DISVAVATPTGLITPIVT AD+RGLS+IS  V+DLATRARD +LKPEE+QGG+FT+SNLGMFGI+EFSAVIN PQA ILAVGGGSP + P     G +  + P+V + +T +LSADRRVVDEA AA  +++F+ Y+  P LL
Sbjct:   18 SQSAWRALSSSLPSHEVVGLPALSPTMESGNIADWKIEEGQAFGPGDVLCEVETDKATVDFEAQDDGVLAKILKPSGSQDIKVGAPVCIVVEDEDDVASFADYNVLDDVSS-------ADDETPAVVASSDTVTEAVVTPS----PSRDIEDQYILSPAARHLSQSKGLDATVLTGTGKGGRVTKGDVLLNLDSLPPLPVVSAVXXXXXXXXXXXXXXXXXAATPVYLSEAEV---------PEPA----------GSFEDVPNNNMRKVIAKRLTESKRDVPHFYTSVEIELDEVLALRKKLVNDHEVKVSVNDLIIKSSALALRDISAVNATYNDKKSEIVPSDDVDISVAVATPTGLITPIVTGADKRGLSSISSCVKDLATRARDGKLKPEEYQGGTFTISNLGMFGIDEFSAVINPPQAAILAVGGGSPRIIPTPYVEGAEEQEPPKVKTIMTARLSADRRVVDEATAAVFMKAFQEYLSKPHLL 477          
BLAST of mRNA_M-pyrifera_M_contig1164.3404.1 vs. uniprot
Match: W7TN15_9STRA (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TN15_9STRA)

HSP 1 Score: 377 bits (967), Expect = 1.800e-121
Identity = 236/487 (48.46%), Postives = 309/487 (63.45%), Query Frame = 1
Query:  238 SARGLASGVDYTVVNMPALSPTMESGSVTEWHKSPGDELAAGDVICDVETDKATVAFDVQDDGVLAKIISAAGSDEVVVGSPVAIIVEDAEAYAAFVKADAAGEVALGGTAPVGAPAPAAAVAVEEEIADKGVSTASGDHAPTRSVAAEFLFAPSARHMAQSKGIDASV-LQGTGKGGRITKADLVTALAKGVVFPSTQASGSSGSVVSQAASPVASGPAPVAAAVQSPPPPRP-LSPAVA----VSSSSGDYEDHPANNIKKITAKRLTQSKAEVPHLYVSMACEVDALMAFRKSLKKEHDVKVSVNDFIIRSAALALRDVPEANAMWTG--GARRSGESIDISVAVATPTGLITPIVTNADRRGLSNISGKVRDLATRARDRQLKPEEFQGGSFTVSNLGMFGINEFSAVINMPQACILAVGGGSPTVK-----PGRQAGD-KPRVCSEVTVKLSADRRVVDEAIAAQLLQSFKHYMETPELLMM 1656
            S RG A   + + + MPALSPTM  G+++EW K PGD   AGDV+C++ETDKA VAFDVQD+ VLAKI+  A   E+ VG PVA+ VED  AY AFV+AD AG++A   T  + +P  ++                    A       +F  +P+ARH+  S+ +  S  + GTGKGGR+TK D++ A+A G      QA                      AAA  + PP  P L PA      + +  G + D   +N++K+ A+RL +SKA VPH Y ++ CE+DA+++FRK ++++ +V VSVNDFIIRSAALALRDVPEANA W G  G     E +DISVAVATP GLITPI++ +DRR LS IS  ++DLA RAR  +LKPEEFQGGSFT+SNLGMFGI+EFSAVIN PQA I+AVG G+  V+     P + AG+ KP   + +T  LS DRRV+DEA+AAQ LQ+FK YM  PELL++
Sbjct:   71 SRRGFADLPEVSTIVMPALSPTMTHGTISEWTKKPGDVCEAGDVLCEIETDKAVVAFDVQDECVLAKILEEAKGREIQVGMPVALSVEDKAAYEAFVEADKAGKIATPSTEALPSPTASSTXXXXXXXXXXXXXXXXXXTAHL----GDFALSPAARHLLHSRQLTLSAEVHGTGKGGRLTKGDVIQAIANG------QAQ---------------------AAAFAAVPPXXPGLDPAQVGIPTIQAGPGTFSDTKNSNMRKVIARRLAESKATVPHAYETVDCEIDAVLSFRKQMQRDFEVNVSVNDFIIRSAALALRDVPEANAFWDGPKGTAVLKEDVDISVAVATPAGLITPIISGSDRRRLSEISATMKDLAGRARQGKLKPEEFQGGSFTISNLGMFGIDEFSAVINPPQAAIMAVGRGAKRVRAPPYLPDQHAGNLKPYTATVMTATLSFDRRVLDEALAAQFLQAFKSYMSRPELLLL 526          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1164.3404.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L3X9_9PHAE1.090e-22969.75Dihydrolipoamide acetyltransferase component of py... [more]
D7FM36_ECTSI2.100e-20766.96Dihydrolipoamide S-acetyltransferase n=1 Tax=Ectoc... [more]
A0A7S2R7Y6_9STRA3.260e-13954.16Dihydrolipoamide acetyltransferase component of py... [more]
A0A7S2ALJ9_9STRA4.420e-13652.59Dihydrolipoamide acetyltransferase component of py... [more]
A0A835ZCE2_9STRA1.210e-13354.80Dihydrolipoamide acetyltransferase component of py... [more]
A0A7S4SV80_9STRA1.430e-13350.20Acetyltransferase component of pyruvate dehydrogen... [more]
A0A812V1C5_SYMMI1.030e-12547.48Dihydrolipoamide acetyltransferase component of py... [more]
A0A7R9YCE9_9STRA2.320e-12351.08Dihydrolipoamide acetyltransferase component of py... [more]
A0A7S2LCD3_9STRA5.220e-12348.16Acetyltransferase component of pyruvate dehydrogen... [more]
W7TN15_9STRA1.800e-12148.46Dihydrolipoamide acetyltransferase component of py... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1164contigM-pyrifera_M_contig1164:11274..18872 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score628.6
Seed ortholog evalue2.7e-177
Seed eggNOG ortholog2880.D7FM36
KEGG rclassRC00004,RC02742,RC02857
KEGG koko:K00627,ko:K04371,ko:K04412
KEGG ReactionR00209,R02569
KEGG Pathwayko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01521,ko01522,ko01524,ko04010,ko04011,ko04012,ko04013,ko04014,ko04015,ko04022,ko04024,ko04062,ko04066,ko04068,ko04071,ko04072,ko04114,ko04140,ko04150,ko04151,ko04210,ko04214,ko04218,ko04261,ko04270,ko04320,ko04350,ko04360,ko04370,ko04371,ko04380,ko04390,ko04391,ko04392,ko04510,ko04520,ko04540,ko04550,ko04611,ko04620,ko04621,ko04650,ko04657,ko04658,ko04659,ko04660,ko04662,ko04664,ko04666,ko04668,ko04713,ko04720,ko04722,ko04723,ko04724,ko04725,ko04726,ko04730,ko04810,ko04910,ko04912,ko04914,ko04915,ko04916,ko04917,ko04919,ko04921,ko04926,ko04930,ko04933,ko04934,ko04960,ko05010,ko05020,ko05034,ko05131,ko05132,ko05133,ko05140,ko05142,ko05145,ko05152,ko05160,ko05161,ko05164,ko05165,ko05167,ko05200,ko05203,ko05205,ko05210,ko05211,ko05212,ko05213,ko05214,ko05215,ko05216,ko05218,ko05219,ko05220,ko05221,ko05223,ko05224,ko05225,ko05226,ko05230,ko05231,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map01521,map01522,map01524,map04010,map04011,map04012,map04013,map04014,map04015,map04022,map04024,map04062,map04066,map04068,map04071,map04072,map04114,map04140,map04150,map04151,map04210,map04214,map04218,map04261,map04270,map04320,map04350,map04360,map04370,map04371,map04380,map04390,map04391,map04392,map04510,map04520,map04540,map04550,map04611,map04620,map04621,map04650,map04657,map04658,map04659,map04660,map04662,map04664,map04666,map04668,map04713,map04720,map04722,map04723,map04724,map04725,map04726,map04730,map04810,map04910,map04912,map04914,map04915,map04916,map04917,map04919,map04921,map04926,map04930,map04933,map04934,map04960,map05010,map05020,map05034,map05131,map05132,map05133,map05140,map05142,map05145,map05152,map05160,map05161,map05164,map05165,map05167,map05200,map05203,map05205,map05210,map05211,map05212,map05213,map05214,map05215,map05216,map05218,map05219,map05220,map05221,map05223,map05224,map05225,map05226,map05230,map05231
KEGG ModuleM00307,M00683,M00687
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.dihydrolipoyllysine-residue acetyltransferase activity
EggNOG OGsCOG0508@1,KOG0557@2759,KOG0660@1,KOG0660@2759
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-01_010535.1
EC2.3.1.12,2.7.11.24
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01601,ko00000,ko00001,ko00002,ko01000,ko01001,ko03036,ko04147
Exons2
Model size1659
Cds size1659
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815681.2640736-CDS-M-pyrifera_M_contig1164:11273..126681622815681.2640736-CDS-M-pyrifera_M_contig1164:11273..12668Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1164 11274..12668 -
1692277519.176-CDS-M-pyrifera_M_contig1164:11273..126681692277519.176-CDS-M-pyrifera_M_contig1164:11273..12668Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1164 11274..12668 -
1622815681.2823195-CDS-M-pyrifera_M_contig1164:18608..188721622815681.2823195-CDS-M-pyrifera_M_contig1164:18608..18872Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1164 18609..18872 -
1692277519.1903422-CDS-M-pyrifera_M_contig1164:18608..188721692277519.1903422-CDS-M-pyrifera_M_contig1164:18608..18872Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1164 18609..18872 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1164.3404.1prot_M-pyrifera_M_contig1164.3404.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig1164 11274..18872 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig1164.3404.1

>prot_M-pyrifera_M_contig1164.3404.1 ID=prot_M-pyrifera_M_contig1164.3404.1|Name=mRNA_M-pyrifera_M_contig1164.3404.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=553bp
MSISGARVLLRLTKAVSFPGRLRSVAAVHHGGSRAASSASGVTLVRHSRV
VGQTWRGAGSWRRRRGRSGLGAAVLLPSQSARGLASGVDYTVVNMPALSP
TMESGSVTEWHKSPGDELAAGDVICDVETDKATVAFDVQDDGVLAKIISA
AGSDEVVVGSPVAIIVEDAEAYAAFVKADAAGEVALGGTAPVGAPAPAAA
VAVEEEIADKGVSTASGDHAPTRSVAAEFLFAPSARHMAQSKGIDASVLQ
GTGKGGRITKADLVTALAKGVVFPSTQASGSSGSVVSQAASPVASGPAPV
AAAVQSPPPPRPLSPAVAVSSSSGDYEDHPANNIKKITAKRLTQSKAEVP
HLYVSMACEVDALMAFRKSLKKEHDVKVSVNDFIIRSAALALRDVPEANA
MWTGGARRSGESIDISVAVATPTGLITPIVTNADRRGLSNISGKVRDLAT
RARDRQLKPEEFQGGSFTVSNLGMFGINEFSAVINMPQACILAVGGGSPT
VKPGRQAGDKPRVCSEVTVKLSADRRVVDEAIAAQLLQSFKHYMETPELL
MM*
back to top

mRNA from alignment at M-pyrifera_M_contig1164:11274..18872-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig1164.3404.1 ID=mRNA_M-pyrifera_M_contig1164.3404.1|Name=mRNA_M-pyrifera_M_contig1164.3404.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7599bp|location=Sequence derived from alignment at M-pyrifera_M_contig1164:11274..18872- (Macrocystis pyrifera P11B4 male)
ATGTCGATATCAGGGGCAAGGGTGCTGCTCCGGTTGACGAAGGCCGTCAG CTTTCCAGGAAGGCTGCGGTCGGTGGCAGCTGTACACCATGGCGGATCGC GAGCGGCGAGCTCAGCGTCGGGAGTCACGCTAGTGCGACACTCCAGAGTA GTAGGCCAAACGTGGCGAGGCGCTGGGTCCTGGCGAAGGCGAAGGGGACG CAGCGGCCTTGGAGCTGCTGTGCTCTTGCCTAGCCAGTCAGCTAGAGGTC TGGCATCCGGGGTGGTGAGTGACGTGCGTAAGGTTATGCGCTTTGCACGT GTGGCTGTTGGTGCGGCTGTGACGGACCGATGTTCCAGCTTTTCTGTTTG CACTGCGGAAGTTTTCGTGGCAGCTTGGCAACTACGACGCCGTCACGACT CACTCCAAGAAGGCCGCTATCGTCGCAGGTCGATTCACAGGGTTCTCAGG GCCTGCAGGCGAGAGTAGCCTTTCGCTTTAGGCATGCTCGTGGGAGACTT GTTTTCGCTTCTTGTTGCCTGCCTCCGTGTCCTGATGTGGCATGCCCGAG CAGAACCTCACGGAAAAAGCGCTCGTTTCGACATGCACGCCGAACGAAAG CGTTCGCAGCAACGTATGTGCTGGTACGTTGAGCAGTAGCATTGGCGCCA GTCCCCTCTATATACAAACTACGACTCGTTATAGCGTCCTCGCACGAACA CCGCACACACACGTGATCACGGAGAACCTCCCAGCAATCGTATCACGCTT TAATAGGAACAGTCAGCACCAACAAGCTCCCATCGGTATGCATCTTCGAG GCCCCGAGATACGTGACTATCAAACAGTGATAACTTTGGTGTTGCCAAGC GTCTACGAGTACAGCTGTACGGGCATCGTGAATCGTGAGCGCCCAGCATG ACGTACGGGTATATAGGATGATGTTGCAGTGTCTCTGTCGTGGTTCGTGA CCACAGAGCTTGTATCTTCCCAGGGCGAAGAATCAGCACGGACACTGGGC GTGCTAAATGTCGACAAGTCGAAGACGGTTTCTACCCCTTTGAGTGTTGG AAGATAGCGACCAAAACAATGGTTGGTCGTAACTTGGGGGCGCTATATCA ACCATCTACGAGCAGCGTGAGCGCCAGCATTACGGGTTGCGGGTGGAATC GTGTTGCGCCCGTGCCGCACCACTCCTTGCATCAACCATTGTAACTCGGA CACCCCTTTGTATCATCCGCCAATCGCGCAGTGGCCCGTTGCTGTAGTAG TCATTTTTCATCGTCAACTATCCCCCCCTCTGAAGTCCCAAGAGAGCTAC GAGTACTGTTGTGAAGAACGCACGCACCAGGTCAGAGGCGGAGAAATTGT ACGTACGTGCAAAGGCTCTCCAGATGTGCGCGCAAATTCGAATACGGTTA GGCTGACTCTTATGGGAGCCGAAACCGGAAAACAAAACAGGGTTTGTAGA GAGATCCAGGAAGAATTTCGTGCCAGATCCGACTTATCGAATCTTATCGA TGGCCAAAAAACAGAAATCTCTAAAAATTTTCTGCACGACGTAGTTCGAT CGGAAGTGGCCTGGCCAGACGAAACCAGACACCAGTCCTGTACGGTTCCA GAGCTGGCCGAAACTGGTTTTGAACCCCACACAGGAGGCATAACGTGGCG CGCCTAATACTTGTACATATAATCGCTGCTACTGCTGTACTCTCTCGGTA TCTCTGACACGGTATCCCGGCATATGGCGGTAGCTAGAGACTCCAAGCTC CGGTGATGGCGAACAACGAGCTACGCCGCATGCTCTTGGCGGTTGTCGTT GTGTTCTTGAGCTTTCAGCAATGTGCGCGCACTGCTTCTTGATGCTACAG CTGCCAATCTTGGGGACCCGTCGTCGAAGGAAGCCCAGTCCAGGAAGCTC GAGTCTGCGAAAGCAAGCCCCGTGTTACCCGGCGGGTACCAAACAGGATG CGTGGGTGCCGTGTACTGCTGTGTGTCCGCCGAATTCAAATATTATTGCG TCAACTCCTCCCTCCAACGTCCTCCCATCTCAATCGAAACCCTGGCGTAC TTACACAAAACCCGTGAGACAGGAAAATACGAAACTCGATATACGAATCT TGGCCATCCGAAAATGCCCGTTCTGTTTCCCGGTTTCGGCTCCCATTTGT TCTCCCCGAATCCGGAAAATAAATAATTTAATCTTAATCAGTCGAACTCA CAGCTGACGCATTTCAAAATTTATATATTCTTCAGCCTTATATATACAGG AGTTGTTGTAGACATGTATGGCGTACATGGTACCAAATGAGATCAGAGTG CCAGGTGGGCGGGCCATCGGCGGCTCCTGCGGAAGGCTGATTGTATTTCT GCACCACTAGTGCAAATGAGAACAGGGTTGCCAAATGGGAGGGGCCCACT GCGGGGTCAACGTGCCTAATGGGAACAGGGTCCCAGGTGGTATAAATAAT GCGTGCAGATCTAGATCCTTGCACGTACTCGTATGTGCGATTTCTGCGTA GGTGACACCAGGTATAATACATACCCCTGGTACATAACTGGGACGCCAAG TTTGTATCACCCCATCATCCCCCAATCACGCAGTGGCCGTTGCTGTAATC GTCATTTTTTATCGTCGATTTTCCCCTCTCGTCCCCTTAGAGGGTTAACA TTAATAGTTACCTCGTAATAGTGACGCGAGTGCCCCCATGTACCTACCAG GTACCGGTATAACGCAAATGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTG CTGCTGCTACCGCTGCTGATGTACCTGGTTTTCTGATAGAAGTAGGTATC CCGAGTTAACAGCGCTCCGTGACAAGCCAAAACAGGCTCGTGTCCCTACT TAAGAGCGCAATGCTCTTATCCCGGGACAAGCGGGGAAAATTCGAGTGAA ACAACACGATCAGTCATCTCTAGATGACTTGTATCCGAGTTGAAAGTTGG TTGGGGCGGGCGCCGACGCCAAAGAGAGGCGTGCATGCATGGTAACACCG TGCTTTTTAATATTTTTTCGTACCAAAATTAAACATAATGTGGGCTCACC TCCCGGGGATAGGGACAACTTTTTGTTAATTTTCAAGGTTTTGAGGCGTT TCGGTCCATTTTTATACCCCTGAAGGCCGGTAGAGCAACTTTTGCACAAT AAGATGTAGGCAGTGTGTGTGGTGTGGAGGCAAAGGACGACCGCAGGAAC TATACTGCAACTACTACTGTTGTCCCCTCGAGTGATTGCAGGGGACGCCC AGCTGCTGTGCCGCAGCTTCTGGGTCCGCTGCGGTTGCAGGGGGCGCCCT GCTGCCGTGCCGCAGCTTTTGGGTCCACTACGTTAATTAAATTATCACGA GCTTATCGATCCATACATCCTGTACCGATCTGTCCGTGGGTGTAAGTACC GTTCGGTTATCCATTTGACTAAACGAGCGGTTGTTGCATATACGGACCGC GTGATACGTGGTGCTGCTTTGCGCAGCAAGATACACCAAAGTGTGTGGTG TAGGCAAACACAAACAACAACACGAACGTACTGCTACTGCCACCCTCTCG GCTGGGTGCGGAAACCACACTGCTGCTGCTTGTTGCTGCTTGTGGCAACA GAATATCACACACGAAGTTACGGTATAGATCGTCGGTGGTAACAATAAAA AAAAATATACCAACCGCACAGCTCGAACATCAGAGACGCCCGTGCGTGGT GGTGGTGCAGGCAAACGGTGACGACAGCAGGCACGTGCGCACTGCTGTCC TCTCGACTGGCTGTGAGAATTGCGCTGCTGCTGAGAACAACAGCAGAGGA GGACTACATTAGTTTTTTTCTAGGGGCGGTTGTTGGTCGTTGTGGTGGGT GTCGTTGGGAGTCGGGATGTCGTGCTGTACACGCGCCCGTGCCCCCAACT CTGCCTGCTACGTATCCATCCTCGGTGCTGCATCGTAGGCTCCGATGCAT GAAAAACTAGCCGTAAAGTACACCCCGAATGTGCCACCTCACGCGCATGA TTTTGCCTGGCAACAGCAGAGGAGGCGTAGTTTTGTCTTGGGCCGGTTCG TTGTTGGTCGTCGTGGTGGGCGTGGTCGGAAGTCGGGGTATATACGCACA TACACATACATACATGCGCCTGCACCCCAAGCTCTGCCTATCTATCCTCG ATGGTGCATCGTAGGTTCGGATAGTTGCTCTGCCTATATATCCTCGATGG TGCATCGTAGGTTCGGATAGTTGCAGCTACAGTAGCCAAGAGTACACCGC GGATGTGCCACCTCACGCGCTGGTTTTACCTGTTGCTGCTGATGGGCAAC AACAGAGAGGGGAAGTAGTTTTCTGGTGGCGGCTGTTGTTGGTCGTCGTG GCGGGTGTGGTCGGGAGTCGGGATACGTACATGCGCCCGCAACCCAAGCT CTACCTACCCATCCTCCTTGATGCATCGCAGGATCCGATGCATACAACAA GTCATAGGGTGTACTGCGGATGTACCACCTCACGCGCGTGGTTTAGCCTG CTGCTGCTGGGCGGCACGGTTGCAGCGATGTGCAACAGCCTGCGTGTTGT ACTCGTAGCACGCTCAATACGATATGTGTGCTCAGCAGCAGCTGTCACGG TACTGCTGGCGAATCACAGCCATTGTGTAACTCGTAATGCAACTCATGGC TCTGATTTTTTATTGTTACAAGCTCGAAAATTCTGGTCTGTTTTTACGTG TTTAAATTTTTTGCATGTAAGTCATAACTTTTGGACCTGTCCCTGGGCCC GGTGCCATCATATGTGCAGGAAAGAAACCGCACCACCGCGACAACAGCAG TATGCACTGTTTTGAGCTGTGCAGTACGTATTTCCCAGGAGTTGTTTTGC AACATATGTATTTTCCGCTGTTGGTGAGCACTGTCTGCGACCCCCCATAC CACTCACAATTCCTTTGACGTTCGCTTGCTGCATAAGGTACATATGAAGA ACACATACTACGCCCCACGTACGAAAAACGCAAGAGCGAAAACACACGAA CTATCACTGAAAATGGCGAAGGGTGATTGATGGTGACCGAGCGACTCGTA CAGCAGTACCATGAGATGCGTTTGAATGTTTCCCACCGCTAGCTAAACGG CAGCAACAACGCCATCGAGTTTCCCACCCTCAAAATCATGCCTGAGCTCA GAATCTGCGAGTCACTTTTTCCCACGGCGACATTTATGGCATGTTAAGTG TCGAGTGTGGAGGGCCCGGCGTGTCGTGCCGGAGGCCGCAGTGCACTCCC GCTGCGAAAGGCATGGCTGAAGACCACACTGTATCGACACGTCAAGGTTT TGTTCGGGGTTCGTGGCTCGGATGTTCGGAGTTTTTTAGTGTTGCGGAGA CATGTCAGACCCGGCCTTGGAGCGGGTTAAGGGGACAAAAGGAAAACCGC TGTTGAAAAAGAAAATTCGTGACGAGCCATTTTGACCGCTTTCAATGTCT GCATTTTCTTATCTCGGGCGCTCTTAACTCGGGGTACCCACTTACCAGGT ATCGTATATACGCACACGCCTTTACCGCCGCCTTCACCTTGAACGCCGTG CATTTTTGCCGATAGTGCTGACTGTTTTTACTGCTTTCTCCCGCCCTCCG TGTCTGGTTTATACCTTGGCCAGTAGAGTTTACCACTTATTGGAGAAAAT AGTTGATGCACACTGCTGTGCACGAAACAAAGGGACTAGAGCGAACCACC GGTAGATTGGATCTGATTGGCTTAGGTTAGGGTCAGCTCTATTCGTCTCG TACACACTGACCGCACAACCATTTTCTCGATTATGTGGTAAGGTAACCTC ACTTTTGGTACACAGCTGCTGTACAGTAGTCGTATGCCCAGAATGCGCTG CTCTCTCATTCATCGCTGTCAGATTTTCAGACGGAAATCTTGGCGAAAAT AGTGTAAATACTGCCGAGGTGTGGCCTTTTTTTTTTCGATTACCGGATTG GCCGCACGAAGCACCTCGAGCTGCCAGTGGGCTGTATAGACCCTTGATCC AGCTTCGACAAAAAATGTCAAAATATGCTTGATTTCAATCCTTATTCCTA TATAACCCCTTGGCAATTATGCATACTCTAGTTTGCTCATGTGTTGTGCT GAAGGCCGTTATCACGCGCTGACTGCTGTTGTTGTGCCGCGTTTGCACCC CCCGATTCCACCTCCCTCGCCCGCTCAAAAACCCAAACCGCCTTTTAATC GCAGGACTACACCGTGGTGAACATGCCCGCGCTGTCGCCGACAATGGAGA GCGGCAGCGTGACGGAGTGGCACAAGTCTCCCGGGGACGAACTCGCCGCG GGAGACGTGATCTGCGACGTCGAGACGGACAAGGCCACTGTGGCGTTCGA CGTTCAAGACGACGGCGTGCTCGCGAAGATTATCTCGGCTGCGGGATCAG ACGAGGTCGTTGTGGGCAGCCCCGTAGCAATTATTGTCGAAGATGCGGAA GCGTACGCCGCTTTCGTTAAGGCGGACGCCGCTGGAGAGGTGGCTCTTGG CGGAACGGCACCGGTTGGGGCACCGGCGCCGGCAGCAGCGGTGGCGGTGG AGGAGGAGATTGCAGACAAGGGTGTGTCGACAGCGTCCGGCGACCACGCC CCGACGCGATCTGTAGCAGCGGAGTTTTTGTTTGCGCCGTCGGCGAGGCA CATGGCCCAGAGCAAGGGCATCGACGCAAGCGTGTTGCAGGGGACGGGCA AGGGAGGCCGCATTACCAAGGCGGATCTGGTCACAGCTCTTGCGAAGGGG GTCGTATTCCCTTCTACACAAGCGTCCGGGTCAAGCGGGTCTGTTGTTTC GCAGGCGGCGTCGCCTGTAGCATCGGGGCCTGCGCCAGTAGCCGCTGCGG TGCAATCGCCGCCGCCGCCGCGACCGCTGTCGCCGGCGGTGGCGGTCTCA TCGAGCAGCGGGGATTACGAAGACCACCCGGCCAACAACATCAAGAAGAT CACCGCGAAGCGGCTAACCCAATCCAAGGCGGAGGTGCCGCACCTGTACG TCTCTATGGCGTGCGAGGTCGACGCCCTGATGGCGTTCCGCAAATCCCTG AAAAAAGAACACGACGTCAAGGTTTCGGTGAACGACTTCATCATCCGCTC CGCCGCGCTGGCTCTGCGCGACGTGCCGGAAGCGAACGCGATGTGGACCG GAGGCGCCCGCCGCTCGGGTGAATCCATCGACATCTCGGTCGCGGTGGCA ACGCCGACGGGGCTTATCACCCCCATCGTAACCAATGCCGACCGTCGCGG GCTCAGCAACATCAGCGGGAAGGTAAGGGACCTGGCGACGCGGGCGCGGG ACCGTCAACTCAAGCCCGAAGAGTTTCAGGGCGGCAGCTTCACGGTGTCC AACCTCGGCATGTTCGGCATCAACGAGTTTTCGGCGGTCATCAACATGCC GCAGGCGTGCATCCTCGCTGTGGGCGGTGGGTCGCCGACGGTGAAGCCCG GGAGGCAGGCGGGGGATAAGCCGCGAGTCTGCTCGGAGGTGACGGTGAAG CTCTCGGCGGATCGGAGGGTGGTGGACGAGGCGATCGCCGCGCAGCTGCT CCAGTCCTTCAAGCACTATATGGAAACGCCCGAGCTTCTGATGATGTAG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig1164:11274..18872-

>mRNA_M-pyrifera_M_contig1164.3404.1 ID=mRNA_M-pyrifera_M_contig1164.3404.1|Name=mRNA_M-pyrifera_M_contig1164.3404.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3318bp|location=Sequence derived from alignment at M-pyrifera_M_contig1164:11274..18872- (Macrocystis pyrifera P11B4 male)
ATGTCGATATCAGGGGCAAGGGTGCTGCTCCGGTTGACGAAGGCCGTCAG
CTTTCCAGGAAGGCTGCGGTCGGTGGCAGCTGTACACCATGGCGGATCGC
GAGCGGCGAGCTCAGCGTCGGGAGTCACGCTAGTGCGACACTCCAGAGTA
GTAGGCCAAACGTGGCGAGGCGCTGGGTCCTGGCGAAGGCGAAGGGGACG
CAGCGGCCTTGGAGCTGCTGTGCTCTTGCCTAGCCAGTCAGCTAGAGGTC
TGGCATCCGGGGTGATGTCGATATCAGGGGCAAGGGTGCTGCTCCGGTTG
ACGAAGGCCGTCAGCTTTCCAGGAAGGCTGCGGTCGGTGGCAGCTGTACA
CCATGGCGGATCGCGAGCGGCGAGCTCAGCGTCGGGAGTCACGCTAGTGC
GACACTCCAGAGTAGTAGGCCAAACGTGGCGAGGCGCTGGGTCCTGGCGA
AGGCGAAGGGGACGCAGCGGCCTTGGAGCTGCTGTGCTCTTGCCTAGCCA
GTCAGCTAGAGGTCTGGCATCCGGGGTGGACTACACCGTGGTGAACATGC
CCGCGCTGTCGCCGACAATGGAGAGCGGCAGCGTGACGGAGTGGCACAAG
TCTCCCGGGGACGAACTCGCCGCGGGAGACGTGATCTGCGACGTCGAGAC
GGACAAGGCCACTGTGGCGTTCGACGTTCAAGACGACGGCGTGCTCGCGA
AGATTATCTCGGCTGCGGGATCAGACGAGGTCGTTGTGGGCAGCCCCGTA
GCAATTATTGTCGAAGATGCGGAAGCGTACGCCGCTTTCGTTAAGGCGGA
CGCCGCTGGAGAGGTGGCTCTTGGCGGAACGGCACCGGTTGGGGCACCGG
CGCCGGCAGCAGCGGTGGCGGTGGAGGAGGAGATTGCAGACAAGGGTGTG
TCGACAGCGTCCGGCGACCACGCCCCGACGCGATCTGTAGCAGCGGAGTT
TTTGTTTGCGCCGTCGGCGAGGCACATGGCCCAGAGCAAGGGCATCGACG
CAAGCGTGTTGCAGGGGACGGGCAAGGGAGGCCGCATTACCAAGGCGGAT
CTGGTCACAGCTCTTGCGAAGGGGGTCGTATTCCCTTCTACACAAGCGTC
CGGGTCAAGCGGGTCTGTTGTTTCGCAGGCGGCGTCGCCTGTAGCATCGG
GGCCTGCGCCAGTAGCCGCTGCGGTGCAATCGCCGCCGCCGCCGCGACCG
CTGTCGCCGGCGGTGGCGGTCTCATCGAGCAGCGGGGATTACGAAGACCA
CCCGGCCAACAACATCAAGAAGATCACCGCGAAGCGGCTAACCCAATCCA
AGGCGGAGGTGCCGCACCTGTACGTCTCTATGGCGTGCGAGGTCGACGCC
CTGATGGCGTTCCGCAAATCCCTGAAAAAAGAACACGACGTCAAGGTTTC
GGTGAACGACTTCATCATCCGCTCCGCCGCGCTGGCTCTGCGCGACGTGC
CGGAAGCGAACGCGATGTGGACCGGAGGCGCCCGCCGCTCGGGTGAATCC
ATCGACATCTCGGTCGCGGTGGCAACGCCGACGGGGCTTATCACCCCCAT
CGTAACCAATGCCGACCGTCGCGGGCTCAGCAACATCAGCGGGAAGGTAA
GGGACCTGGCGACGCGGGCGCGGGACCGTCAACTCAAGCCCGAAGAGTTT
CAGGGCGGCAGCTTCACGGTGTCCAACCTCGGCATGTTCGGCATCAACGA
GTTTTCGGCGGTCATCAACATGCCGCAGGCGTGCATCCTCGCTGTGGGCG
GTGGGTCGCCGACGGTGAAGCCCGGGAGGCAGGCGGGGGATAAGCCGCGA
GTCTGCTCGGAGGTGACGGTGAAGCTCTCGGCGGATCGGAGGGTGGTGGA
CGAGGCGATCGCCGCGCAGCTGCTCCAGTCCTTCAAGCACTATATGGAAA
CGCCCGAGCTTCTGATGATGTAGGACTACACCGTGGTGAACATGCCCGCG
CTGTCGCCGACAATGGAGAGCGGCAGCGTGACGGAGTGGCACAAGTCTCC
CGGGGACGAACTCGCCGCGGGAGACGTGATCTGCGACGTCGAGACGGACA
AGGCCACTGTGGCGTTCGACGTTCAAGACGACGGCGTGCTCGCGAAGATT
ATCTCGGCTGCGGGATCAGACGAGGTCGTTGTGGGCAGCCCCGTAGCAAT
TATTGTCGAAGATGCGGAAGCGTACGCCGCTTTCGTTAAGGCGGACGCCG
CTGGAGAGGTGGCTCTTGGCGGAACGGCACCGGTTGGGGCACCGGCGCCG
GCAGCAGCGGTGGCGGTGGAGGAGGAGATTGCAGACAAGGGTGTGTCGAC
AGCGTCCGGCGACCACGCCCCGACGCGATCTGTAGCAGCGGAGTTTTTGT
TTGCGCCGTCGGCGAGGCACATGGCCCAGAGCAAGGGCATCGACGCAAGC
GTGTTGCAGGGGACGGGCAAGGGAGGCCGCATTACCAAGGCGGATCTGGT
CACAGCTCTTGCGAAGGGGGTCGTATTCCCTTCTACACAAGCGTCCGGGT
CAAGCGGGTCTGTTGTTTCGCAGGCGGCGTCGCCTGTAGCATCGGGGCCT
GCGCCAGTAGCCGCTGCGGTGCAATCGCCGCCGCCGCCGCGACCGCTGTC
GCCGGCGGTGGCGGTCTCATCGAGCAGCGGGGATTACGAAGACCACCCGG
CCAACAACATCAAGAAGATCACCGCGAAGCGGCTAACCCAATCCAAGGCG
GAGGTGCCGCACCTGTACGTCTCTATGGCGTGCGAGGTCGACGCCCTGAT
GGCGTTCCGCAAATCCCTGAAAAAAGAACACGACGTCAAGGTTTCGGTGA
ACGACTTCATCATCCGCTCCGCCGCGCTGGCTCTGCGCGACGTGCCGGAA
GCGAACGCGATGTGGACCGGAGGCGCCCGCCGCTCGGGTGAATCCATCGA
CATCTCGGTCGCGGTGGCAACGCCGACGGGGCTTATCACCCCCATCGTAA
CCAATGCCGACCGTCGCGGGCTCAGCAACATCAGCGGGAAGGTAAGGGAC
CTGGCGACGCGGGCGCGGGACCGTCAACTCAAGCCCGAAGAGTTTCAGGG
CGGCAGCTTCACGGTGTCCAACCTCGGCATGTTCGGCATCAACGAGTTTT
CGGCGGTCATCAACATGCCGCAGGCGTGCATCCTCGCTGTGGGCGGTGGG
TCGCCGACGGTGAAGCCCGGGAGGCAGGCGGGGGATAAGCCGCGAGTCTG
CTCGGAGGTGACGGTGAAGCTCTCGGCGGATCGGAGGGTGGTGGACGAGG
CGATCGCCGCGCAGCTGCTCCAGTCCTTCAAGCACTATATGGAAACGCCC
GAGCTTCTGATGATGTAG
back to top