mRNA_M-pyrifera_M_contig116179.3359.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig116179.3359.1 vs. uniprot
Match: A0A7S4HNK8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HNK8_9EUKA) HSP 1 Score: 98.6 bits (244), Expect = 4.760e-23 Identity = 56/72 (77.78%), Postives = 64/72 (88.89%), Query Frame = 1
Query: 7 SELEAALAELKAQEDAYAARTAELERKSEEGGVVSRNRAKNELAQHLAEDPLPLRRAKINMEAAVRKADRAT 222
SELEAAL EL+ QEDAY ++ ELERKSEEGGVVS+N+AK ELAQHLAEDPLPLR+AKI EAAV+KA+RAT
Sbjct: 83 SELEAALQELQKQEDAYESKKKELERKSEEGGVVSKNKAKAELAQHLAEDPLPLRKAKITQEAAVKKAERAT 154
BLAST of mRNA_M-pyrifera_M_contig116179.3359.1 vs. uniprot
Match: A0A7S4JXR2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4JXR2_9EUKA) HSP 1 Score: 97.4 bits (241), Expect = 1.740e-22 Identity = 60/82 (73.17%), Postives = 70/82 (85.37%), Query Frame = 1
Query: 1 AQSELEAALAELKAQEDAYAARTAELERKSEEG--GVVSRNRAKNELAQHLAEDPLPLRRAKINMEAAVRKADRATQAAADA 240
AQ+ELEAALAE+K QEDAY +TA L KSE+ GVV+RNR KNELAQHLAEDPLPLR+AKI EAAVRKA++AT+AAA+A
Sbjct: 12 AQAELEAALAEVKKQEDAYNQKTATLTAKSEDESLGVVTRNRTKNELAQHLAEDPLPLRQAKITAEAAVRKAEKATKAAAEA 93
BLAST of mRNA_M-pyrifera_M_contig116179.3359.1 vs. uniprot
Match: A0A7S4JXG1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4JXG1_9EUKA) HSP 1 Score: 91.7 bits (226), Expect = 3.790e-21 Identity = 56/76 (73.68%), Postives = 64/76 (84.21%), Query Frame = 1
Query: 19 AALAELKAQEDAYAARTAELERKSEEG--GVVSRNRAKNELAQHLAEDPLPLRRAKINMEAAVRKADRATQAAADA 240
AALAE+K QEDAY +TA L KSE+ GVV+RNR KNELAQHLAEDPLPLR+AKI EAAVRKA++AT+AAADA
Sbjct: 1 AALAEVKKQEDAYNQKTASLTAKSEDESLGVVTRNRTKNELAQHLAEDPLPLRQAKITAEAAVRKAEKATKAAADA 76
BLAST of mRNA_M-pyrifera_M_contig116179.3359.1 vs. uniprot
Match: A0A6U1WWW6_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A6U1WWW6_9EUKA) HSP 1 Score: 96.7 bits (239), Expect = 6.380e-21 Identity = 57/80 (71.25%), Postives = 67/80 (83.75%), Query Frame = 1
Query: 1 AQSELEAALAELKAQEDAYAARTAELERKSEEGGVVSRNRAKNELAQHLAEDPLPLRRAKINMEAAVRKADRATQAAADA 240
AQ ELE ALA L A+E AY + AELERKS EGGVVS N+AKNELAQHLAEDPLPLRRAKI EAAV++A++A++ +ADA
Sbjct: 380 AQKELEEALAALHAEEKAYNDKKAELERKSTEGGVVSMNKAKNELAQHLAEDPLPLRRAKITAEAAVKRAEKASKVSADA 459
BLAST of mRNA_M-pyrifera_M_contig116179.3359.1 vs. uniprot
Match: L8GVG0_ACACA (TolAlike protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GVG0_ACACA) HSP 1 Score: 94.0 bits (232), Expect = 8.750e-21 Identity = 55/77 (71.43%), Postives = 67/77 (87.01%), Query Frame = 1
Query: 1 AQSELEAALAELKAQEDAYAARTAELERKSEEGGVVSRNRAKNELAQHLAEDPLPLRRAKINMEAAVRKADRATQAA 231
A+ EL+AAL ++K QEDA +TAEL++KSEEGG+VSRNRAK ELAQHLAEDPLPLR+AKI +EAAV+KAD+A AA
Sbjct: 158 AKRELDAALKDVKDQEDARNNKTAELQKKSEEGGLVSRNRAKAELAQHLAEDPLPLRKAKITLEAAVKKADKAAIAA 234
BLAST of mRNA_M-pyrifera_M_contig116179.3359.1 vs. uniprot
Match: L8GWT1_ACACA (TolA, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GWT1_ACACA) HSP 1 Score: 93.2 bits (230), Expect = 6.350e-20 Identity = 51/69 (73.91%), Postives = 59/69 (85.51%), Query Frame = 1
Query: 37 KAQEDAYAARTAELERKSEEGGVVSRNRAKNELAQHLAEDPLPLRRAKINMEAAVRKADRATQAAADAT 243
KAQEDA+ RTAEL+R SEEG +V +N+AKNELAQHL+ DPLPLRRAKI EAAV+KADRA QAA +AT
Sbjct: 233 KAQEDAFNGRTAELQRLSEEGSIVQKNKAKNELAQHLSSDPLPLRRAKITQEAAVKKADRAAQAAKEAT 301
BLAST of mRNA_M-pyrifera_M_contig116179.3359.1 vs. uniprot
Match: L8GV16_ACACA (TolA protein n=3 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GV16_ACACA) HSP 1 Score: 89.4 bits (220), Expect = 1.010e-18 Identity = 49/68 (72.06%), Postives = 59/68 (86.76%), Query Frame = 1
Query: 40 AQEDAYAARTAELERKSEEGGVVSRNRAKNELAQHLAEDPLPLRRAKINMEAAVRKADRATQAAADAT 243
AQE+A+ ARTAEL R SEEG +V++NRAKNELAQHL+ DPLPLR+AKI EAAV+KA+RA QAA +AT
Sbjct: 202 AQEEAFNARTAELTRLSEEGSIVAKNRAKNELAQHLSSDPLPLRKAKITQEAAVKKAERAAQAAREAT 269
BLAST of mRNA_M-pyrifera_M_contig116179.3359.1 vs. uniprot
Match: A0A7S4JXE2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4JXE2_9EUKA) HSP 1 Score: 89.7 bits (221), Expect = 1.270e-18 Identity = 55/76 (72.37%), Postives = 64/76 (84.21%), Query Frame = 1
Query: 16 EAALAELKAQEDAYAARTAELERKSEEG--GVVSRNRAKNELAQHLAEDPLPLRRAKINMEAAVRKADRATQAAAD 237
EAALAE+K QEDAY +TA L KSE+ GVV+RNR KNELAQHLAEDPLPLR+AKI EAAVRKA++AT+AAA+
Sbjct: 280 EAALAEVKKQEDAYNQKTATLTAKSEDESLGVVTRNRTKNELAQHLAEDPLPLRQAKITAEAAVRKAEKATKAAAE 355
BLAST of mRNA_M-pyrifera_M_contig116179.3359.1 vs. uniprot
Match: L8H398_ACACA (TolAlike protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H398_ACACA) HSP 1 Score: 87.4 bits (215), Expect = 3.080e-18 Identity = 48/73 (65.75%), Postives = 64/73 (87.67%), Query Frame = 1
Query: 1 AQSELEAALAELKAQEDAYAARTAELERKSEEGGVVSRNRAKNELAQHLAEDPLPLRRAKINMEAAVRKADRA 219
AQ E++AALA++ AQE A +RTAEL+RKS EGG+V +N+AK ELAQHLAEDPLPLR+AKI +EAA+++A++A
Sbjct: 167 AQEEVDAALADVNAQESARDSRTAELQRKSTEGGIVQQNKAKAELAQHLAEDPLPLRKAKITLEAALKRAEKA 239
BLAST of mRNA_M-pyrifera_M_contig116179.3359.1 vs. uniprot
Match: L8H1H5_ACACA (F_actin_bund_C domain-containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H1H5_ACACA) HSP 1 Score: 87.8 bits (216), Expect = 3.090e-18 Identity = 48/65 (73.85%), Postives = 56/65 (86.15%), Query Frame = 1
Query: 37 KAQEDAYAARTAELERKSEEGGVVSRNRAKNELAQHLAEDPLPLRRAKINMEAAVRKADRATQAA 231
KAQEDAY +T +L+++SEEGGVV RN+AKNELAQHL EDPLPLR+AKI EAAV+KADRA AA
Sbjct: 191 KAQEDAYNHKTEDLKKRSEEGGVVQRNKAKNELAQHLGEDPLPLRKAKITQEAAVKKADRAAVAA 255 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116179.3359.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig116179.3359.1 >prot_M-pyrifera_M_contig116179.3359.1 ID=prot_M-pyrifera_M_contig116179.3359.1|Name=mRNA_M-pyrifera_M_contig116179.3359.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=119bp AQSELEAALAELKAQEDAYAARTAELERKSEEGGVVSRNRAKNELAQHLAback to top mRNA from alignment at M-pyrifera_M_contig116179:206..562- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig116179.3359.1 ID=mRNA_M-pyrifera_M_contig116179.3359.1|Name=mRNA_M-pyrifera_M_contig116179.3359.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=357bp|location=Sequence derived from alignment at M-pyrifera_M_contig116179:206..562- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig116179:206..562- >mRNA_M-pyrifera_M_contig116179.3359.1 ID=mRNA_M-pyrifera_M_contig116179.3359.1|Name=mRNA_M-pyrifera_M_contig116179.3359.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=714bp|location=Sequence derived from alignment at M-pyrifera_M_contig116179:206..562- (Macrocystis pyrifera P11B4 male)back to top |