mRNA_M-pyrifera_M_contig1161.3347.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig1161.3347.1 vs. uniprot
Match: D7G359_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G359_ECTSI) HSP 1 Score: 792 bits (2045), Expect = 4.880e-255 Identity = 458/786 (58.27%), Postives = 534/786 (67.94%), Query Frame = 1
Query: 1 PQTTSDRRRVHARLWRWLAVAEGLWGQVVAAMVAPEFQEKPLQDELRKASMKHLVLAAKCGTFASSRSVTLDVAKRLWNVVLPLADTAAGRAMAFSPLRGVLKEMVKGGVVDGGSVRSQLYVLLFECYSDRSEWKQGLAAVTEALGCVPPDYQRSLWQWRVVFMSRQGITALDGLAKTKESDKVLQGKSWCTLARSASDPKQQFSAYLKALESLGERFERVDCLVEMGEWATGRGLTAIGRDYLRSAVDLLYDVEEKASRA---ALEPRRKQQYDGNGRGE---TICRAARETRRSASAGSGLGRSASKRSL--QGSLSKXXXXXXXXXXXXXQAPSSTAAEIDAHGVPKTLKMGHLEAAVRILAMLARGG--CSVFEERLQLLLQAYYFLGRIAGMVMETMWWGHRHRAYHEAVPGVADRGKLPFDDWCNTPGNEGDCYIDISGAVAPTASPSRQLHLRDWAYWR-------PEVEHG--------------DDLYRWMASPPPGREDFVIGPATMSKAPLFFHHLLDLAETMESHGLAAHAAAPIALSELVARLCLGPPRPAKGKAAGNEKGGEEISAESGGDDKGPTPDMFPALALACLRRSRLLLKLGPTCHQAAQEAASAAGKLGVSIEEAARRGAEVDRILRQREEASLP--------------RHLQASPSSTPA--------------ITFAEDPRNVGVASPGGRNPARSSSVPAVEVVKL---EDRQMWALLAKESVLLGECRAAAEYLAAAQKHNDAFHDQANTIRYTQRPTALC 2172
PQ+ +DRRRVH RLWRWLAV EGLWGQ VA+ +APE QEKPLQDELR+ SMKHL LAAK T ASS VTLDVAKRLWNV LPLADT+AGRA+AFS L VL+EM KGG+++GG+VR+QLYVLLFECYSDRSEWKQGLA VT++L CVPPD+QR LWQWRVVF+SR GIT+LDGLAKTKESDKVLQGKSWCTLARSASDPKQQ SAYLKALESLGERFER+DCLVEMGEWA GRGL G DY RSA+DLLYDVEE++ +A + +DG+ RGE + C + ++R S G G R+ASKRSL QG XXX SSTA D +G P+ L MGHLE AVR LAMLARGG CS FEERL +L+Q YYF+GR+AGMV ET+ G R + +VP +RG+ F +WC + TA LHLRDWAYWR P+ ++G DDL R+MA+PP GRE FVI TM KAPL FHHLLDLAETMESHGLAAHAAAP+AL+ELVARLCLGP R +G G + AE G+D + ++FPALALA LRR+RLL KLGPTCH+AA +AASAAG LGVS EEAARRG+EVDRILRQR+E SL R++ A+ S PA + DPR + A S VEV +L EDR++WA+LA E+V LGECRAAAEYLAAA +HNDAFHD+ N + + ALC
Sbjct: 1400 PQSPADRRRVHPRLWRWLAVGEGLWGQAVASAIAPESQEKPLQDELRRVSMKHLALAAKFATLASSSPVTLDVAKRLWNVALPLADTSAGRAIAFSALAAVLREMAKGGIIEGGAVRAQLYVLLFECYSDRSEWKQGLAVVTDSLRCVPPDFQRPLWQWRVVFLSRLGITSLDGLAKTKESDKVLQGKSWCTLARSASDPKQQLSAYLKALESLGERFERLDCLVEMGEWAMGRGLAQSGSDYFRSALDLLYDVEERSMQALNNGPQDTDDDSHDGS-RGEGGRSTCESNGDSRTQPSTGGGFRRAASKRSLGSQGGAGSRGSSRGGAPSXXXXXSSSTALS-DQNGYPEALTMGHLETAVRTLAMLARGGGCCSTFEERLDVLMQGYYFVGRMAGMVEETVECGRRRWLFEASVPEGGERGETAFQEWCASSXXXXXXXXXXXXXXNSTAGGRAPLHLRDWAYWRLEPVPVEPKDDNGGDKNNHDSVDDNGEDDLDRYMAAPPAGREPFVISTTTMEKAPLLFHHLLDLAETMESHGLAAHAAAPLALAELVARLCLGPAR-RRGGGGSXXDGTDGKGAEDVGEDG--SANVFPALALARLRRARLLFKLGPTCHEAAMQAASAAGPLGVSAEEAARRGSEVDRILRQRKEYSLQQPWQKQEQQPGMPGRNVSAASSLPPAQSTQTRFDGSTLNNTSSGLDPRTAVGVGRKSHDVADDSEGREVEVPRLGNLEDRKVWAMLATEAVQLGECRAAAEYLAAAHRHNDAFHDRNNVVSCLEAQAALC 2180
BLAST of mRNA_M-pyrifera_M_contig1161.3347.1 vs. uniprot
Match: A0A6H5JTT0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT0_9PHAE) HSP 1 Score: 278 bits (712), Expect = 1.050e-82 Identity = 145/221 (65.61%), Postives = 160/221 (72.40%), Query Frame = 1
Query: 1 PQTTSDRRRVHARLWRWLAVAEGLWGQVVAAMVAPEFQEKPLQDELRKASMKHLVLAAKCGTFASSRSVTLDVAKRLWNVVLPLADTAAGRAMAFSPLRGVLKEMVKGGVVDGGSVRSQLYVLLFECYSDRSEWKQGLAAVTEALGCVPPDYQRSLWQWRVVFMSRQGITALDGLAKTKESDKVLQGKSWCTLARSASDPKQQFSAYLKALESLGERFERV 663
PQ +DRRRVH RLWRWLAV EGLWGQ VA+ +APE QEK LQDELR+ SMKHL LAAK T ASS VTLDVAKRLWNV LPLADT+AGRA+AFS L VL+EM K G+++GG+VR+Q R LWQWRVVF+SR GIT+LDGLAKTKESDKVLQGKSWCTLARSASDPKQQ SAYLKALES GER+ V
Sbjct: 241 PQRPADRRRVHPRLWRWLAVGEGLWGQAVASAIAPESQEKSLQDELRRVSMKHLALAAKFATLASSSRVTLDVAKRLWNVALPLADTSAGRAIAFSALAAVLREMAKAGIIEGGAVRAQ----------------------------------RPLWQWRVVFLSRLGITSLDGLAKTKESDKVLQGKSWCTLARSASDPKQQLSAYLKALESYGERYANV 427
BLAST of mRNA_M-pyrifera_M_contig1161.3347.1 vs. uniprot
Match: A0A6H5JQG0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQG0_9PHAE) HSP 1 Score: 249 bits (637), Expect = 4.700e-73 Identity = 174/336 (51.79%), Postives = 206/336 (61.31%), Query Frame = 1
Query: 829 GETICRAARETRRSASAGSGLGRSASKRSL--QGSLSKXXXXXXXXXXXXXQAPSSTAAEIDAHGVPKTLKMGHLEAAVRILAMLARGG--CSVFEERLQLLLQAYYFLGRIAGMVMETMWWGHRHRAYHEAVPGVADRGKLPFDDWCNTPGNEGDCYIDISGAVAPTASPSRQLHLRDWAYWR-------PEVEHG--------------DDLYRWMASPPPGREDFVIGPATMSKAPLFFHHLLDLAETMESHGLAAHAAAPIALSELVARLCLGPPRPAKGKAAG----NEKGGEEISAESGGDDKGPTPDMFPALALACLRRSRLLLKLGPT 1749
G + C + ++R S G GL R ASKRSL G XXXXXXXXXXXXX STA D +G P+ L MGHLE AVR LAMLARGG CS FEERL +L+Q YYF+GR+AGMV ET+ G R + E+VP + G++ F +WC SG + A LHLRDWAYWR P+ ++G DDL R+MA+PP GRE FVI + KAPL FHHLLDLAETMESHGLAAHAAAP+AL+ELVARLCLGP R G +G + KG E+I + G+ FPALALA LRR+RLL KLGPT
Sbjct: 24 GRSTCESNDDSRAQPSTGGGLRRGASKRSLGSHGGAXXXXXXXXXXXXXXXXXXXSTALS-DQNGYPEALTMGHLETAVRTLAMLARGGGCCSTFEERLDVLMQGYYFVGRMAGMVEETVECGRRRWLFEESVPEGGEGGEMAFQEWC----------ASSSGGYSGRAP----LHLRDWAYWRLEPVPVEPKDDNGGDKNNYDSVDENGEDDLDRYMATPPAGREPFVISTTIIEKAPLLFHHLLDLAETMESHGLAAHAAAPLALAELVARLCLGPARRRNGGGSGGVGTDGKGAEDIGEDGSGN-------AFPALALARLRRARLLFKLGPT 337
BLAST of mRNA_M-pyrifera_M_contig1161.3347.1 vs. uniprot
Match: A0A1V9YIG9_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YIG9_9STRA) HSP 1 Score: 132 bits (331), Expect = 8.880e-28 Identity = 73/223 (32.74%), Postives = 117/223 (52.47%), Query Frame = 1
Query: 40 LWRWLAVAEGLWGQVVAAMVA-PEFQEKPLQDELRKASMKHLVLAAKCGTFASSRSVTLDVAKRLWNVVLPLADTAAG-----RAMAFSPLRGVLKEMVKGGVVDGGSVRSQLYVLLFECYSDRSEWKQGLAAVTEALGCVPPDYQRSLWQWRVVFMSRQGITALDGLAKTKESDKVLQGKSWCTLARSASDPKQQFSAYLKALESLGERFERVDCLVEMGEW 690
+WRW A+A+ +W Q + +VA E QEK ++ EL +++HL+LAA G A + + A+ +WN VL + D A R L+ +L + G S R + L + + + W+ GL AV A +P YQR LWQ+RV+FMS+ G + DG AK K++D +LQ + +A S++D Q+ A + ++ L E+ +E+ EW
Sbjct: 947 IWRWYALAQTVWAQAILLLVAGTETQEKDIKHELAMFAVQHLLLAADFGVRAGNAKLVESAARVMWNGVLDILDANASPNPSFRRKLLPDLQRMLGHLTAAGPAADWSFRLEFVCALLDVFEELHLWEPGLEAVEAAFATIPAFYQRPLWQYRVIFMSKLGKSVQDGFAKMKDADVLLQARVAKRVAASSTDASAQYKALFRTVKDLSGMPEQAQFQIEIAEW 1169
BLAST of mRNA_M-pyrifera_M_contig1161.3347.1 vs. uniprot
Match: T0RW37_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0RW37_SAPDV) HSP 1 Score: 122 bits (305), Expect = 1.250e-24 Identity = 68/223 (30.49%), Postives = 113/223 (50.67%), Query Frame = 1
Query: 40 LWRWLAVAEGLWGQVVAAMVA-PEFQEKPLQDELRKASMKHLVLAAKCGTFASSRSVTLDVAKRLWNVVLPLADTAAG-----RAMAFSPLRGVLKEMVKGGVVDGGSVRSQLYVLLFECYSDRSEWKQGLAAVTEALGCVPPDYQRSLWQWRVVFMSRQGITALDGLAKTKESDKVLQGKSWCTLARSASDPKQQFSAYLKALESLGERFERVDCLVEMGEW 690
+WRW A+A+ +W + + + E QE+ ++ EL +++HL+L A+ G A + + A +WN VL + D R L+ +L + G R + L + Y + W+ GL AV A +P YQR LWQ+RV+FMS+ G + DG AK K++D +LQ + +A S++D Q+ A + ++ LG E+ +E+ EW
Sbjct: 952 IWRWYALAQTVWATAILDLASGTETQERDIKHELALFAVQHLLLGAEFGVRAGNPRLVERAAMVMWNGVLDILDANGSPNPSFRRKLLPDLQRMLAHLEAAGAASDWGFRLEFICALLDVYEELHLWEPGLDAVEAAFASIPAYYQRPLWQYRVIFMSKLGKSVQDGFAKMKDNDVLLQARVAKRVAASSTDAAAQYKALFRTVKDLGGMPEQAQFQLEIAEW 1174
BLAST of mRNA_M-pyrifera_M_contig1161.3347.1 vs. uniprot
Match: A0A6G0XW29_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XW29_9STRA) HSP 1 Score: 119 bits (297), Expect = 1.170e-23 Identity = 69/227 (30.40%), Postives = 119/227 (52.42%), Query Frame = 1
Query: 46 RWLAVAEGLWGQVVAAMV-APEFQEKPLQDELRKASMKHLVLAAKCGTFASSRSVTLDVAKRLWNVVLPLADTAAG-----RAMAFSPLRGVLKEMVKGGVVDGG-SVRSQLYVLLFECYSDRSEWKQGLAAVTEALGCVPPDYQRSLWQWRVVFMSRQGITALDG-----LAKTKESDKVLQGKSWCTLARSASDPKQQFSAYLKALESLGERFERVDCLVEMGEW 690
RW ++A+ +W Q V + A E E+ ++ EL +++H+V+ A G ++ + A+ WN + DTAA R +P+ +L +DG R + L + Y + EW GL+ V A VPP +QRSLW++RV+F+S+ G + DG +AK KE+D +LQ + +A +++D Q+ A ++A++ + R E+ LV++ EW
Sbjct: 1018 RWYSMAQLVWAQAVMQLADATEANERDVKHELALFAIQHVVVGADFGVRCGMPALVQNAARLFWNATTDVLDTAAAPDPRFRQQLIAPMHAMLDHFA--AALDGEMEFRVEFVCALLDVYEELGEWANGLSTVEAAFQVVPPSFQRSLWRYRVLFLSKLGKSVHDGGGGGGMAKMKETDALLQARVTKRMAAASTDLSTQYKALVRAVKEVDGRVEQAQFLVDVAEW 1242
BLAST of mRNA_M-pyrifera_M_contig1161.3347.1 vs. uniprot
Match: G0QVI3_ICHMG (Uncharacterized protein (Fragment) n=1 Tax=Ichthyophthirius multifiliis (strain G5) TaxID=857967 RepID=G0QVI3_ICHMG) HSP 1 Score: 118 bits (295), Expect = 2.000e-23 Identity = 69/228 (30.26%), Postives = 117/228 (51.32%), Query Frame = 1
Query: 13 SDRRRVHARLWRWLAVAEGLWGQVVAAMVAPEFQEKPLQDELRKASMKHLVLAAKCGTFASSRSVTLDVAKRLWNVVLPLADTAAGRAMAFSPLRGVLKEMVKGGVVDGGSVRSQLYVLLFECYSDRSEWKQGLAAVTEALGCVPPDYQRSLWQWRVVFMSRQGITALDGLAKTKESDKVLQGKSWCTLARSASDPKQQFSAYLKALESLGER--FERVDCLVEMGEW 690
SD + + + RW ++AE L+ + + M+ PE QE+ Q++L ++KH V A G A+ S+ LD +K +WN+ L D+A R P+ ++ + + L LLF+ + E+ G +P Q+S+W+ +++FMS+QG L ++ KE+D LQ K W LAR+++ +Q+ AY KA+E L + E V+ +E EW
Sbjct: 972 SDLQGIPSSRLRWYSLAEYLYSENLLRMINPETQEQKSQEKLLFYALKHAVEGANKGLKANINSLVLDASKLVWNICAKLQDSAINRKALIKPIFSIIFYLKSCKEKSEPDLILLLSQLLFKATLENEEYHLGENVADMVFELIPKSMQKSIWEAKMIFMSKQGKNELQAISNMKEADASLQSKVWIRLARASNAIYKQYQAYNKAIEILKKENSVEIVEVYIEFAEW 1199
BLAST of mRNA_M-pyrifera_M_contig1161.3347.1 vs. uniprot
Match: A0A812KWY9_9DINO (CFAP46 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812KWY9_9DINO) HSP 1 Score: 112 bits (281), Expect = 8.740e-22 Identity = 70/246 (28.46%), Postives = 111/246 (45.12%), Query Frame = 1
Query: 40 LWRWLAVAEGLWGQVVAAMVAPEFQEKPLQDELRKASMKHLVLAAKCGTFASSRSVTLDVAKRLWNVVLPLADTAAGRAMAFSPLRGVLKEMVKGGVVDGGSVRSQLYVLLFECYSDRSEWKQGLAAVTEALGCVPPDYQRSLWQWRVVFMSRQGITALDGLAKTKESDKVLQGKSWCTLARSASDPKQQFSAYLKALESLGERF--ERVDCLVEMGEWATGRGL-TAIGRDYLRSAVDLLYDVEE 768
L RW L G+V A++V P QEK +LR+ S++ + ++ + A LWNV LPL + R M P + + + + LY L++CY+D+ +W + + +A VP R LW R++ +S QG + K KES Q W L ++S PK Q +A+ KA+ L E V+ ++ +W G + + L +A DLL D+EE
Sbjct: 1167 LLRWRGACHALCGEVFASLVDPLKQEKESLTKLRRMSVEQFECCCEYAMVTNNHELASFGASALWNVSLPLMHSGETRQMLIEPFLKATRALAAVKFNEDPYFFAALYAALYDCYADQHQWDKIHDMLKDAFVAVPTSSHRRLWSLRMLALSHQGKNVTVAMGKMKESQAKAQANIWLVLVSASSQPKDQITAFTKAINVLQAAMQPEVVEVRMQFADWLLRNGFPVSDALEQLAAASDLLLDIEE 1412
BLAST of mRNA_M-pyrifera_M_contig1161.3347.1 vs. uniprot
Match: UPI0019559AFB (cilia- and flagella-associated protein 46 n=1 Tax=Pimephales promelas TaxID=90988 RepID=UPI0019559AFB) HSP 1 Score: 73.2 bits (178), Expect = 1.780e-9 Identity = 52/195 (26.67%), Postives = 88/195 (45.13%), Query Frame = 1
Query: 190 ASSRSVTLDVAKRLWNVVLPLADTAAGRAMAFSPLRGVLKEMVK-------------GGVVDGG------------SVRSQLYVLLFECYSDRSEWKQGLAAVTEALGCVPPDYQRSLWQWRVVFMSRQGITALDGLAKTKESDKVLQGKSWCTLARSASDPKQQFSAY---LKALESLGERFERVDCLVEMGEW 690
A S V + A WN +PL D+ A R PL +LK M+ G+ + G +V + L ++D +WK+ L + EA+G +P ++ L + RV+ +R G + L + + ++ D++ W A A Q+ S Y + AL+S G ++++VD L+E GEW
Sbjct: 1372 ACSWCVCVTAAGHYWNACVPLLDSRADRRQLREPLELILKAMMNTYRTHTPDRSTGASGLENDGPETPESTRDDELTVCVSMINALLLIHADTGDWKRSLKLLDEAVGDMPHTHRPVLLKQRVLVKARLGESVLLDMQRFRDEDEIFLSHMWRRAALCAKHTHQRLSCYQNAIAALKSPGAQWQKVDVLLEFGEW 1566
BLAST of mRNA_M-pyrifera_M_contig1161.3347.1 vs. uniprot
Match: UPI00074FD0C8 (LOW QUALITY PROTEIN: cilia- and flagella-associated protein 46 n=1 Tax=Gekko japonicus TaxID=146911 RepID=UPI00074FD0C8) HSP 1 Score: 72.0 bits (175), Expect = 3.990e-9 Identity = 54/225 (24.00%), Postives = 96/225 (42.67%), Query Frame = 1
Query: 133 ELRKASMKHLVLAAKCGTFASSRSVTLDVAKRLWNVVLPLADTAAGRAMAFSPLRGVLKEMVKG-----------------------------------GVVDGGSVRSQLYVLLFECYSDRSEWKQGLAAVTEALGCVPPDYQR-SLWQWRVVFMSRQGITALDGLAKTKESDKVLQGKSWCTLARSASDPKQQFSAYLKALESLGER---FERVDCLVEMGEW 690
+LR + K V +A A + ++ + ++ WN LP + R P +LK ++K G + ++R+ LYVLLF+ Y+D+++W+ GL + EA+ +P QR +++ ++ +R G + + K K+ + W LA +SD Q S Y +E L +R ++VD L+E EW
Sbjct: 1025 QLRLVASKSFVKSASYAGAAGNLALAMIASRHFWNTCLPFIGSPIDRQQLKKPTEVILKNIIKAAEAKNKQGKESLVYLHQWPTAEFQSSSLSDGHFYPGADEDLTLRTFLYVLLFQVYADQNDWEAGLKVLDEAVQVLPRSKQRLPIFKHMLLVKARLGRNYIMEIQKFKDESEDYLSYMWHRLALVSSDLAGQLSCYQNGIEVLQKREFELKKVDNLLEFAEW 1249 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1161.3347.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig1161.3347.1 >prot_M-pyrifera_M_contig1161.3347.1 ID=prot_M-pyrifera_M_contig1161.3347.1|Name=mRNA_M-pyrifera_M_contig1161.3347.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=724bp PQTTSDRRRVHARLWRWLAVAEGLWGQVVAAMVAPEFQEKPLQDELRKASback to top mRNA from alignment at M-pyrifera_M_contig1161:1473..28662+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig1161.3347.1 ID=mRNA_M-pyrifera_M_contig1161.3347.1|Name=mRNA_M-pyrifera_M_contig1161.3347.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=27190bp|location=Sequence derived from alignment at M-pyrifera_M_contig1161:1473..28662+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig1161:1473..28662+ >mRNA_M-pyrifera_M_contig1161.3347.1 ID=mRNA_M-pyrifera_M_contig1161.3347.1|Name=mRNA_M-pyrifera_M_contig1161.3347.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=4344bp|location=Sequence derived from alignment at M-pyrifera_M_contig1161:1473..28662+ (Macrocystis pyrifera P11B4 male)back to top |