mRNA_M-pyrifera_M_contig116081.3344.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig116081.3344.1 vs. uniprot
Match: A0A6B1EDZ3_9ACTN (Dihydroxy-acid dehydratase n=8 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1EDZ3_9ACTN) HSP 1 Score: 353 bits (907), Expect = 4.780e-117 Identity = 176/187 (94.12%), Postives = 181/187 (96.79%), Query Frame = 1
Query: 1 EFNTIAVDDGIAMGPSGMLYSLPSRDLIADSVEYMVNAHCADALVCISNCDKITPGMLNAAMRLNVPVIFVSGGPMEAGKTKLAGVSVKLDLINPMISAGDASVSDEDLLEMERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGTVVATHADRKELFLEAGRRIVDLARRYYEKDDESVLPRSI 561
EFNTIAVDDGIAMG GMLYSLPSRDLIADSVEYMVNAHCADALVCISNCDKITPGML AAMRLN+P +FVSGGPMEAGKTKLAGVSVKLDLINPMISAGDASVSDEDLLEMERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGT +ATHADR+ELF EAGRR+VDLARRYYEKDDESVLPRSI
Sbjct: 73 EFNTIAVDDGIAMGHGGMLYSLPSRDLIADSVEYMVNAHCADALVCISNCDKITPGMLIAAMRLNIPTVFVSGGPMEAGKTKLAGVSVKLDLINPMISAGDASVSDEDLLEMERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGTTLATHADRRELFCEAGRRVVDLARRYYEKDDESVLPRSI 259
BLAST of mRNA_M-pyrifera_M_contig116081.3344.1 vs. uniprot
Match: A0A7K1Z9X8_9ACTN (Dihydroxy-acid dehydratase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1Z9X8_9ACTN) HSP 1 Score: 343 bits (879), Expect = 7.800e-113 Identity = 167/187 (89.30%), Postives = 180/187 (96.26%), Query Frame = 1
Query: 1 EFNTIAVDDGIAMGPSGMLYSLPSRDLIADSVEYMVNAHCADALVCISNCDKITPGMLNAAMRLNVPVIFVSGGPMEAGKTKLAGVSVKLDLINPMISAGDASVSDEDLLEMERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGTVVATHADRKELFLEAGRRIVDLARRYYEKDDESVLPRSI 561
EFNTIAVDDGIAMG GMLYSLPSRDLI+DS+EYMVNAHCADALVCISNCDKITPGMLNA MRLN+P +FVSGGPMEAGKTKLAGVSVKLDLI+PMI AGD SVSDEDLL+MERSACPTCGSCSGMFTANSMNCLTEALGL+LPGNGTV+ATHADR++LFLEAGRRIVD+A+R Y+KDDESVLPRSI
Sbjct: 73 EFNTIAVDDGIAMGHDGMLYSLPSRDLISDSIEYMVNAHCADALVCISNCDKITPGMLNATMRLNIPTVFVSGGPMEAGKTKLAGVSVKLDLIDPMIKAGDTSVSDEDLLQMERSACPTCGSCSGMFTANSMNCLTEALGLALPGNGTVLATHADRRQLFLEAGRRIVDMAKRRYDKDDESVLPRSI 259
BLAST of mRNA_M-pyrifera_M_contig116081.3344.1 vs. uniprot
Match: A0A2E8LA56_9ACTN (Dihydroxy-acid dehydratase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8LA56_9ACTN) HSP 1 Score: 334 bits (856), Expect = 1.970e-112 Identity = 165/187 (88.24%), Postives = 176/187 (94.12%), Query Frame = 1
Query: 1 EFNTIAVDDGIAMGPSGMLYSLPSRDLIADSVEYMVNAHCADALVCISNCDKITPGMLNAAMRLNVPVIFVSGGPMEAGKTKLAGVSVKLDLINPMISAGDASVSDEDLLEMERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGTVVATHADRKELFLEAGRRIVDLARRYYEKDDESVLPRSI 561
EFNTIAVDDGIAMG GMLYSLPSRDLIADSVEYMVNAHCADALVCISNCDKITPGML AAMRLN+P IFV+GGPMEAGKTKLAGV VKLDLI+PMI AGD SVSDED+ EMERSACPTCGSCSGMFTANSMNCL EALGL+LPGNGTVVATH+DR+ LFL+AGR+IVDLA RYYEK+D+SVLPRSI
Sbjct: 73 EFNTIAVDDGIAMGHDGMLYSLPSRDLIADSVEYMVNAHCADALVCISNCDKITPGMLMAAMRLNIPTIFVTGGPMEAGKTKLAGVEVKLDLIDPMIKAGDTSVSDEDVQEMERSACPTCGSCSGMFTANSMNCLAEALGLALPGNGTVVATHSDRERLFLQAGRQIVDLATRYYEKEDDSVLPRSI 259
BLAST of mRNA_M-pyrifera_M_contig116081.3344.1 vs. uniprot
Match: A0A354B6Y2_9ACTN (Dihydroxy-acid dehydratase n=7 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A354B6Y2_9ACTN) HSP 1 Score: 334 bits (856), Expect = 2.290e-109 Identity = 165/187 (88.24%), Postives = 176/187 (94.12%), Query Frame = 1
Query: 1 EFNTIAVDDGIAMGPSGMLYSLPSRDLIADSVEYMVNAHCADALVCISNCDKITPGMLNAAMRLNVPVIFVSGGPMEAGKTKLAGVSVKLDLINPMISAGDASVSDEDLLEMERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGTVVATHADRKELFLEAGRRIVDLARRYYEKDDESVLPRSI 561
EFNTIAVDDGIAMG GMLYSLPSRDLIADSVEYMVNAHCADALVCISNCDKITPGML AAMRLN+P IFV+GGPMEAGKTKLAGV VKLDLI+PMI AGD SVSDED+ EMERSACPTCGSCSGMFTANSMNCL EALGL+LPGNGTVVATH+DR+ LFL+AGR+IVDLA RYYEK+D+SVLPRSI
Sbjct: 73 EFNTIAVDDGIAMGHDGMLYSLPSRDLIADSVEYMVNAHCADALVCISNCDKITPGMLMAAMRLNIPTIFVTGGPMEAGKTKLAGVEVKLDLIDPMIKAGDTSVSDEDVQEMERSACPTCGSCSGMFTANSMNCLAEALGLALPGNGTVVATHSDRERLFLQAGRQIVDLATRYYEKEDDSVLPRSI 259
BLAST of mRNA_M-pyrifera_M_contig116081.3344.1 vs. uniprot
Match: A0A7Y2DB52_9ACTN (Dihydroxy-acid dehydratase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DB52_9ACTN) HSP 1 Score: 333 bits (855), Expect = 2.830e-109 Identity = 167/187 (89.30%), Postives = 174/187 (93.05%), Query Frame = 1
Query: 1 EFNTIAVDDGIAMGPSGMLYSLPSRDLIADSVEYMVNAHCADALVCISNCDKITPGMLNAAMRLNVPVIFVSGGPMEAGKTKLAGVSVKLDLINPMISAGDASVSDEDLLEMERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGTVVATHADRKELFLEAGRRIVDLARRYYEKDDESVLPRSI 561
EFNTIAVDDGIAMG GMLYSLPSRDLIADSVEYMVNAHCADALVCISNCDKITPGML AAMRLNVP IFVSGGPMEAGKT+LAGV VK+DLI+ MI+A D SVSDED+ MERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGT +ATHADR+ LFLEAGRRIVDLARRYYEKDDE VLPRSI
Sbjct: 73 EFNTIAVDDGIAMGHGGMLYSLPSRDLIADSVEYMVNAHCADALVCISNCDKITPGMLMAAMRLNVPAIFVSGGPMEAGKTRLAGVEVKVDLIDAMITAADDSVSDEDVASMERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGTTLATHADREHLFLEAGRRIVDLARRYYEKDDEGVLPRSI 259
BLAST of mRNA_M-pyrifera_M_contig116081.3344.1 vs. uniprot
Match: A0A661CJ29_9GAMM (Dihydroxy-acid dehydratase (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661CJ29_9GAMM) HSP 1 Score: 325 bits (832), Expect = 8.280e-108 Identity = 158/187 (84.49%), Postives = 174/187 (93.05%), Query Frame = 1
Query: 1 EFNTIAVDDGIAMGPSGMLYSLPSRDLIADSVEYMVNAHCADALVCISNCDKITPGMLNAAMRLNVPVIFVSGGPMEAGKTKLAGVSVKLDLINPMISAGDASVSDEDLLEMERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGTVVATHADRKELFLEAGRRIVDLARRYYEKDDESVLPRSI 561
EFNTIAVDDGIAMG GMLYSLPSRD+IADSVEYMVNAHCADA+VCISNCDKITPGML AA+RLN+PVIFVSGGPMEAGKT+LAG VKLDL++ M+ A D VSDED+ ++ERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNG+++ATHADRKELFLEAGR IVDLA+RYYE+DDES LPRSI
Sbjct: 73 EFNTIAVDDGIAMGHGGMLYSLPSRDIIADSVEYMVNAHCADAIVCISNCDKITPGMLMAALRLNIPVIFVSGGPMEAGKTRLAGKDVKLDLVDAMVQAADEHVSDEDVAQIERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGSLLATHADRKELFLEAGRTIVDLAKRYYEQDDESALPRSI 259
BLAST of mRNA_M-pyrifera_M_contig116081.3344.1 vs. uniprot
Match: A0A7Y2IGG1_9ACTN (Dihydroxy-acid dehydratase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2IGG1_9ACTN) HSP 1 Score: 327 bits (838), Expect = 1.010e-106 Identity = 158/187 (84.49%), Postives = 177/187 (94.65%), Query Frame = 1
Query: 1 EFNTIAVDDGIAMGPSGMLYSLPSRDLIADSVEYMVNAHCADALVCISNCDKITPGMLNAAMRLNVPVIFVSGGPMEAGKTKLAGVSVKLDLINPMISAGDASVSDEDLLEMERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGTVVATHADRKELFLEAGRRIVDLARRYYEKDDESVLPRSI 561
EFNTIAVDDGIAMG +GMLYSLPSRD+I+DSVEYMVNAHCADALVCISNCDKITPGMLNAA+RLN+P +FVSGGPMEAGKT+LAG VK+DLI+ M+SAGD++VSDED+ +ERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNG+ +ATHADR+ELFL AGR IVDLA+RYYEKDDESVLPR+I
Sbjct: 73 EFNTIAVDDGIAMGHAGMLYSLPSRDIISDSVEYMVNAHCADALVCISNCDKITPGMLNAALRLNIPTVFVSGGPMEAGKTRLAGAEVKVDLISAMMSAGDSTVSDEDVAAIERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGSTLATHADREELFLTAGRTIVDLAKRYYEKDDESVLPRTI 259
BLAST of mRNA_M-pyrifera_M_contig116081.3344.1 vs. uniprot
Match: A0A7C1YYK5_9ACTN (Dihydroxy-acid dehydratase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1YYK5_9ACTN) HSP 1 Score: 327 bits (838), Expect = 1.160e-106 Identity = 158/187 (84.49%), Postives = 178/187 (95.19%), Query Frame = 1
Query: 1 EFNTIAVDDGIAMGPSGMLYSLPSRDLIADSVEYMVNAHCADALVCISNCDKITPGMLNAAMRLNVPVIFVSGGPMEAGKTKLAGVSVKLDLINPMISAGDASVSDEDLLEMERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGTVVATHADRKELFLEAGRRIVDLARRYYEKDDESVLPRSI 561
EFNTIA+DDGIAMG GMLYSLPSR+LIADSVEYMVNAHCADA+VCISNCDKITPGM+NA++RLN+PVIFVSGGPMEAGKTKLAG VK+DLI+ M++AGDA+VSDED+ +ERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNG+++ATHADR+ELFLEA RRIVDLARR+YEKDDES LPR+I
Sbjct: 73 EFNTIAIDDGIAMGHGGMLYSLPSRELIADSVEYMVNAHCADAIVCISNCDKITPGMINASLRLNIPVIFVSGGPMEAGKTKLAGSEVKVDLISAMMTAGDANVSDEDVAAVERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGSLLATHADRRELFLEAARRIVDLARRWYEKDDESALPRTI 259
BLAST of mRNA_M-pyrifera_M_contig116081.3344.1 vs. uniprot
Match: A0A351EYB9_9ACTN (Dihydroxy-acid dehydratase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A351EYB9_9ACTN) HSP 1 Score: 326 bits (835), Expect = 3.180e-106 Identity = 158/187 (84.49%), Postives = 177/187 (94.65%), Query Frame = 1
Query: 1 EFNTIAVDDGIAMGPSGMLYSLPSRDLIADSVEYMVNAHCADALVCISNCDKITPGMLNAAMRLNVPVIFVSGGPMEAGKTKLAGVSVKLDLINPMISAGDASVSDEDLLEMERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGTVVATHADRKELFLEAGRRIVDLARRYYEKDDESVLPRSI 561
EFNTIAVDDGIAMG GMLYSLPSR+LIADSVEYMVNAHCADALVCISNCDKITPGML AA+RLN+PV+FVSGGPMEAGKT+LAG VK+DLI+ M+SAGD++VSDED+ +ERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGTV+ATH+DR+ELFL AGR IVD+A+RYYEKDD+SVLPR+I
Sbjct: 73 EFNTIAVDDGIAMGHGGMLYSLPSRELIADSVEYMVNAHCADALVCISNCDKITPGMLMAALRLNIPVVFVSGGPMEAGKTRLAGAEVKVDLISAMMSAGDSNVSDEDVAAIERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGTVLATHSDREELFLRAGRTIVDIAKRYYEKDDDSVLPRNI 259
BLAST of mRNA_M-pyrifera_M_contig116081.3344.1 vs. uniprot
Match: A0A2G2HZB1_9GAMM (Dihydroxy-acid dehydratase n=5 Tax=root TaxID=1 RepID=A0A2G2HZB1_9GAMM) HSP 1 Score: 325 bits (833), Expect = 6.180e-106 Identity = 158/187 (84.49%), Postives = 176/187 (94.12%), Query Frame = 1
Query: 1 EFNTIAVDDGIAMGPSGMLYSLPSRDLIADSVEYMVNAHCADALVCISNCDKITPGMLNAAMRLNVPVIFVSGGPMEAGKTKLAGVSVKLDLINPMISAGDASVSDEDLLEMERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGTVVATHADRKELFLEAGRRIVDLARRYYEKDDESVLPRSI 561
EFNTIAVDDGIAMG SGMLYSLPSR++IADSVEYMVNAHCADA+VCISNCDKITPGML AA+RLN+PVIFVSGGPMEAGKT+LAG VKLDL++ M+ A D SVSDED+ ++ERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNG+++ATHADRK+LFLEAGR IVDLA+RYYE+DDES LPRSI
Sbjct: 73 EFNTIAVDDGIAMGHSGMLYSLPSREIIADSVEYMVNAHCADAIVCISNCDKITPGMLMAALRLNIPVIFVSGGPMEAGKTRLAGKDVKLDLVDAMVQAADDSVSDEDVAQVERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGSLLATHADRKDLFLEAGRTIVDLAKRYYEQDDESALPRSI 259 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116081.3344.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig116081.3344.1 >prot_M-pyrifera_M_contig116081.3344.1 ID=prot_M-pyrifera_M_contig116081.3344.1|Name=mRNA_M-pyrifera_M_contig116081.3344.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=187bp EFNTIAVDDGIAMGPSGMLYSLPSRDLIADSVEYMVNAHCADALVCISNCback to top mRNA from alignment at M-pyrifera_M_contig116081:2..562- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig116081.3344.1 ID=mRNA_M-pyrifera_M_contig116081.3344.1|Name=mRNA_M-pyrifera_M_contig116081.3344.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=561bp|location=Sequence derived from alignment at M-pyrifera_M_contig116081:2..562- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig116081:2..562- >mRNA_M-pyrifera_M_contig116081.3344.1 ID=mRNA_M-pyrifera_M_contig116081.3344.1|Name=mRNA_M-pyrifera_M_contig116081.3344.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1122bp|location=Sequence derived from alignment at M-pyrifera_M_contig116081:2..562- (Macrocystis pyrifera P11B4 male)back to top |