mRNA_M-pyrifera_M_contig116077.3343.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig116077.3343.1 vs. uniprot
Match: A0A388PTV7_9PROT (Uncharacterized protein n=1 Tax=Methylophilaceae bacterium TaxID=2030816 RepID=A0A388PTV7_9PROT) HSP 1 Score: 199 bits (505), Expect = 1.410e-63 Identity = 99/124 (79.84%), Postives = 107/124 (86.29%), Query Frame = 1
Query: 1 ISLLSPEYLLSVERWPFHTEPPDHYDLLSYLLDLSVSQSSTLVPLH*PHDFRPCLGYLRAPPLLFGRRPPQSNYPPHTVPDPDYGPRLEPQTCQGGISRLAPR*LASPLQSLPPILHKQAQSPV 372
ISLLSPEYLLSVERWPFHTEPPDHYDLLS+LLDLSVSQSS L+PLH +DFRP LGYLR PPLLFGRRPPQSN PP+TVP+P G RLEPQ QGGISRLAP LA+ LQ LPPILH+ QSP+
Sbjct: 19 ISLLSPEYLLSVERWPFHTEPPDHYDLLSHLLDLSVSQSSNLMPLHYQYDFRPYLGYLRTPPLLFGRRPPQSNCPPYTVPNPVSGSRLEPQQHQGGISRLAPHDLATTLQCLPPILHRSCQSPM 142
BLAST of mRNA_M-pyrifera_M_contig116077.3343.1 vs. uniprot
Match: A0A8H2LVE7_BURPE (Cell wall-associated hydrolase n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A8H2LVE7_BURPE) HSP 1 Score: 197 bits (500), Expect = 1.540e-61 Identity = 99/124 (79.84%), Postives = 104/124 (83.87%), Query Frame = 1
Query: 1 ISLLSPEYLLSVERWPFHTEPPDHYDLLSYLLDLSVSQSSTLVPLH*PHDFRPCLGYLRAPPLLFGRRPPQSNYPPHTVPDPDYGPRLEPQTCQGGISRLAPR*LASPLQSLPPILHKQAQSPV 372
ISLLSPEYLLSVERWPFHTEPPDHYDLLS+LLDLSVSQ STL+PLH HDFRP L YLR PPL FGRRPPQSN P TVPDPD+GPRLEPQT QGGISR AP LA SLPPILH+ QSP+
Sbjct: 99 ISLLSPEYLLSVERWPFHTEPPDHYDLLSHLLDLSVSQLSTLMPLHYQHDFRPYLAYLRTPPLRFGRRPPQSNCLPCTVPDPDHGPRLEPQTNQGGISRTAPPKLAFRFHSLPPILHRSVQSPM 222
BLAST of mRNA_M-pyrifera_M_contig116077.3343.1 vs. uniprot
Match: L9U5D6_9GAMM (Uncharacterized protein n=1 Tax=Halomonas titanicae BH1 TaxID=1204738 RepID=L9U5D6_9GAMM) HSP 1 Score: 188 bits (478), Expect = 3.460e-59 Identity = 93/123 (75.61%), Postives = 96/123 (78.05%), Query Frame = 2
Query: 2 SACYPRSTFYPLSDGPSIQNHRITMTYFRTCSTCPSRSQAPLCHYTNRMISDHA*GTFVLLRYSLGGDRPSQTTHHTRSLTRITGLG*NLKLARVVFQGWLHGNWRHRFKASHLSYTSKLKVQ 370
SACYPRSTFYPLSDGPSIQNHRIT T FRTCSTC SRSQAPLC T +SD A GTFVLLRYSLGGDRPSQTTHHT S RIT L N AR+VFQGWL NWR FKAS LSYT + VQ
Sbjct: 14 SACYPRSTFYPLSDGPSIQNHRITRTCFRTCSTCLSRSQAPLCSCTQCTMSDRAEGTFVLLRYSLGGDRPSQTTHHTLSSIRITDLSENANDARLVFQGWLPPNWRPEFKASQLSYTGNISVQ 136
BLAST of mRNA_M-pyrifera_M_contig116077.3343.1 vs. uniprot
Match: I3D5P0_9ARCH (Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus salaria BD31 TaxID=859350 RepID=I3D5P0_9ARCH) HSP 1 Score: 183 bits (464), Expect = 8.090e-57 Identity = 88/102 (86.27%), Postives = 92/102 (90.20%), Query Frame = 1
Query: 1 ISLLSPEYLLSVERWPFHTEPPDHYDLLSYLLDLSVSQSSTLVPLH*PHDFRPCLGYLRAPPLLFGRRPPQSNYPPHTVPDPDYGPRLEPQTCQGGISRLAP 306
ISLLSPEYLLSVERWPFHTEPPDHYDLLS+LLDLSVSQSS L+PLH +DFRP LGYLR PPLLFGRRPPQSN PP+TVPDPDYGPRLEPQ QGGISR P
Sbjct: 78 ISLLSPEYLLSVERWPFHTEPPDHYDLLSHLLDLSVSQSSNLMPLHYQYDFRPYLGYLRTPPLLFGRRPPQSNCPPYTVPDPDYGPRLEPQQHQGGISRSTP 179
BLAST of mRNA_M-pyrifera_M_contig116077.3343.1 vs. uniprot
Match: A0A6B2E5S5_9DIPT (Putative cell wall-associated hydrolase (Fragment) n=1 Tax=Phlebotomus kandelakii TaxID=1109342 RepID=A0A6B2E5S5_9DIPT) HSP 1 Score: 172 bits (435), Expect = 1.830e-52 Identity = 86/102 (84.31%), Postives = 90/102 (88.24%), Query Frame = 1
Query: 1 ISLLSPEYLLSVERWPFHTEPPDHYDLLSYLLDLSVSQSSTLVPLH*PHDFRPCLGYLRAPPLLFGRRPPQSNYPPHTVPDPDYGPRLEPQTCQGGISRLAP 306
ISLLSPEYLLSVERWPFHTEPPDHY LLS+LLDLSVSQSSTL+PLH +D RP L YLRAPPLLF RRPPQSN PP TVPDPD G RLEPQT QGGISR+AP
Sbjct: 74 ISLLSPEYLLSVERWPFHTEPPDHYVLLSHLLDLSVSQSSTLMPLHYQYDVRPYLAYLRAPPLLFRRRPPQSNCPPCTVPDPDNGSRLEPQTDQGGISRMAP 175
BLAST of mRNA_M-pyrifera_M_contig116077.3343.1 vs. uniprot
Match: A0A510LIN6_NEIGO (Cell wall-associated hydrolase n=3 Tax=Neisseria TaxID=482 RepID=A0A510LIN6_NEIGO) HSP 1 Score: 171 bits (432), Expect = 1.840e-51 Identity = 91/118 (77.12%), Postives = 94/118 (79.66%), Query Frame = 1
Query: 1 ISLLSPEYLLSVERWPFHTEPPDHYDLLSYLLDLSVSQSSTLVPLH*PHDFRPCLGYLRAPPLLFGRRPPQSNYPPHTVPDPDYGPRLEPQTCQGGISRLAPR*LASPLQSLPPILHK 354
ISLLSPEYLLSVERWPFHTEPPDHY LLS+L DLSVSQ S L+PLH DFRP LG LR PPL FGRRPPQSN P TVPDPD G LEPQ QGGISR P+ LAS L SLPPILHK
Sbjct: 99 ISLLSPEYLLSVERWPFHTEPPDHYVLLSHLPDLSVSQLSYLLPLHYQSDFRPDLGNLRTPPLRFGRRPPQSNCLPCTVPDPDDGSGLEPQRHQGGISRTTPQRLASLLPSLPPILHK 216
BLAST of mRNA_M-pyrifera_M_contig116077.3343.1 vs. uniprot
Match: A0A0W0XYZ0_9GAMM (Uncharacterized protein n=1 Tax=Legionella quinlivanii TaxID=45073 RepID=A0A0W0XYZ0_9GAMM) HSP 1 Score: 162 bits (410), Expect = 1.320e-49 Identity = 82/105 (78.10%), Postives = 90/105 (85.71%), Query Frame = -3
Query: 5 TPVTVEPTLKYHPGKFEVLT*ARNPGQGPCVVGSLTGAVSSQRVTEEHEGTLSMVGNHAVSVMAQGCLTARRTGRAGTKVGHSDPVVLYGRAIAQRIKGTPGITG 319
TPV +EPTLKYHP EVLT + +PG+G C+VGSLTGAVSSQRVTEEH+GTL VG+ SV A+GCLTARRT RAGTKVG SDPVVLYGRAIAQRIKGTPGITG
Sbjct: 3 TPVRMEPTLKYHPVIIEVLTWSSHPGRGQCMVGSLTGAVSSQRVTEEHKGTLGTVGHRTKSVKAKGCLTARRTCRAGTKVGLSDPVVLYGRAIAQRIKGTPGITG 107
BLAST of mRNA_M-pyrifera_M_contig116077.3343.1 vs. uniprot
Match: A0A0H5PZI5_9ZZZZ (Uncharacterized protein n=1 Tax=uncultured prokaryote TaxID=198431 RepID=A0A0H5PZI5_9ZZZZ) HSP 1 Score: 160 bits (404), Expect = 4.910e-48 Identity = 85/122 (69.67%), Postives = 92/122 (75.41%), Query Frame = 1
Query: 1 ISLLSPEYLLSVERWPFHTEPPDHYDLLSYLLDLSVSQSSTLVPLH*PHDFRPCLGYLRAPPLLFGRRPPQSNYPPHTVPDPDYGPRLEPQTCQGGISRLAPR*LASPLQSLPPILHKQAQS 366
ISLLSPEYLLSVERWPFH+ PPDHYDLLS+LL+L +SQSSTL+PLH HDFRP L YLR PPL F RRPPQSN P TVP+ + LEPQT QGGISR P LA LPPILHK S
Sbjct: 19 ISLLSPEYLLSVERWPFHSVPPDHYDLLSHLLELWLSQSSTLLPLHYQHDFRPYLAYLRTPPLPFRRRPPQSNCLPCTVPNSVHLSWLEPQTNQGGISRSTPEELALLFLCLPPILHKSVHS 140
BLAST of mRNA_M-pyrifera_M_contig116077.3343.1 vs. uniprot
Match: A0A6A5KV19_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5KV19_LUPAL) HSP 1 Score: 155 bits (391), Expect = 2.300e-43 Identity = 77/123 (62.60%), Postives = 84/123 (68.29%), Query Frame = 2
Query: 2 SACYPRSTFYPLSDGPSIQNHRITMTYFRTCSTCPSRSQAPLCHYTNRMISDHA*GTFVLLRYSLGGDRPSQTTHHTRSLTRITGLG*NLKLARVVFQGWLHGNWRHRFKASHLSYTSKLKVQ 370
SACYPR TFYPLSDGPS ++HRITMT FR CSTC SRSQA LCH T R ISD + T LRYS GGDRPSQTTHHT S R+T +GWLH NWR FKA HLSYT + + Q
Sbjct: 7 SACYPRRTFYPLSDGPSTRDHRITMTDFRLCSTCQSRSQAGLCHCTRRAISDRSEPTIARLRYSFGGDRPSQTTHHTLSRIRMTD------------RGWLHSNWRPSFKAYHLSYTCRHECQ 117
BLAST of mRNA_M-pyrifera_M_contig116077.3343.1 vs. uniprot
Match: A0A0N8SDS7_PSESH (Uncharacterized protein n=4 Tax=Pseudomonas syringae group TaxID=136849 RepID=A0A0N8SDS7_PSESH) HSP 1 Score: 145 bits (366), Expect = 5.370e-43 Identity = 71/86 (82.56%), Postives = 72/86 (83.72%), Query Frame = 2
Query: 2 SACYPRSTFYPLSDGPSIQNHRITMTYFRTCSTCPSRSQAPLCHYTNRMISDHA*GTFVLLRYSLGGDRPSQTTHHTRSLTRITGL 259
SACYPRSTFYPLSDGPSIQNHRIT TYFRTCSTC SRSQA C YT R ISD + TFVLLRYSLGGDRPSQTTHHT S RIT L
Sbjct: 14 SACYPRSTFYPLSDGPSIQNHRITKTYFRTCSTCLSRSQARFCLYTLRPISDRSERTFVLLRYSLGGDRPSQTTHHTLSSIRITDL 99 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116077.3343.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig116077.3343.1 >prot_M-pyrifera_M_contig116077.3343.1 ID=prot_M-pyrifera_M_contig116077.3343.1|Name=mRNA_M-pyrifera_M_contig116077.3343.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=47bp ISLLSPEYLLSVERWPFHTEPPDHYDLLSYLLDLSVSQSSTLVPLH*back to top mRNA from alignment at M-pyrifera_M_contig116077:1..372+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig116077.3343.1 ID=mRNA_M-pyrifera_M_contig116077.3343.1|Name=mRNA_M-pyrifera_M_contig116077.3343.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=372bp|location=Sequence derived from alignment at M-pyrifera_M_contig116077:1..372+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig116077:1..372+ >mRNA_M-pyrifera_M_contig116077.3343.1 ID=mRNA_M-pyrifera_M_contig116077.3343.1|Name=mRNA_M-pyrifera_M_contig116077.3343.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=282bp|location=Sequence derived from alignment at M-pyrifera_M_contig116077:1..372+ (Macrocystis pyrifera P11B4 male)back to top |