mRNA_M-pyrifera_M_contig115992.3321.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig115992.3321.1 vs. uniprot
Match: A0A3D5DBF3_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DBF3_9GAMM) HSP 1 Score: 320 bits (820), Expect = 6.540e-108 Identity = 153/171 (89.47%), Postives = 163/171 (95.32%), Query Frame = 1
Query: 1 GSMFRYAWPKVVEQIVETLEVYPRVKGIQIMNDMGSYMFTTYSGQWIPDTPGRRRAVIERLMQWNAFSNSSPVEGIMAAIRTFYSPDKKISLFVYGDEFTGRSIREVVDFVGTVNQRDASGAPRVRIHAIGFPVQAANPPHLQTTGIRFASLMRELTRRNGGMFVGLNAFR 513
GSMFRYAWPKVV+QIV+TLEVYPRVKGIQI+NDMGSYMFT+YSGQWIPDTP RRR VI+RL+ WNAFSNSSPVEGIMAAIRTFY+PDKKISLFVYGDEFTGRSIREVVDFVGT+N+ DASG PRVRIHAIGFPVQAANPPHLQ TG+RFASLMRELTRRNGG FVGLN FR
Sbjct: 163 GSMFRYAWPKVVDQIVQTLEVYPRVKGIQILNDMGSYMFTSYSGQWIPDTPARRRVVIDRLLTWNAFSNSSPVEGIMAAIRTFYAPDKKISLFVYGDEFTGRSIREVVDFVGTLNRTDASGNPRVRIHAIGFPVQAANPPHLQITGMRFASLMRELTRRNGGTFVGLNQFR 333
BLAST of mRNA_M-pyrifera_M_contig115992.3321.1 vs. uniprot
Match: A0A523NUB7_9PROT (VWA domain-containing protein n=2 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523NUB7_9PROT) HSP 1 Score: 312 bits (800), Expect = 6.680e-105 Identity = 147/171 (85.96%), Postives = 162/171 (94.74%), Query Frame = 1
Query: 1 GSMFRYAWPKVVEQIVETLEVYPRVKGIQIMNDMGSYMFTTYSGQWIPDTPGRRRAVIERLMQWNAFSNSSPVEGIMAAIRTFYSPDKKISLFVYGDEFTGRSIREVVDFVGTVNQRDASGAPRVRIHAIGFPVQAANPPHLQTTGIRFASLMRELTRRNGGMFVGLNAFR 513
GSMFRYAWPKVVEQIV+TLEVYP+VKGIQI+NDMG+YMF++Y G+WIPDTPGRRR VIERL+ WNAFSNSSPVEGIMAAIRTFYSP+KKISLFVYGDEFTG+SIR+VV+FVG +NQ+DASG PRVRIHAIGFPV AANPPHLQ TGIRFA+LMRELTRRNGG FVGLN FR
Sbjct: 161 GSMFRYAWPKVVEQIVQTLEVYPKVKGIQILNDMGTYMFSSYRGKWIPDTPGRRRIVIERLLHWNAFSNSSPVEGIMAAIRTFYSPNKKISLFVYGDEFTGKSIRQVVEFVGKINQKDASGKPRVRIHAIGFPVMAANPPHLQITGIRFATLMRELTRRNGGTFVGLNRFR 331
BLAST of mRNA_M-pyrifera_M_contig115992.3321.1 vs. uniprot
Match: A0A095VSX5_9GAMM (Uncharacterized protein n=2 Tax=Halieaceae TaxID=1706372 RepID=A0A095VSX5_9GAMM) HSP 1 Score: 256 bits (654), Expect = 9.730e-83 Identity = 115/171 (67.25%), Postives = 140/171 (81.87%), Query Frame = 1
Query: 1 GSMFRYAWPKVVEQIVETLEVYPRVKGIQIMNDMGSYMFTTYSGQWIPDTPGRRRAVIERLMQWNAFSNSSPVEGIMAAIRTFYSPDKKISLFVYGDEFTGRSIREVVDFVGTVNQRDASGAPRVRIHAIGFPVQAANPPHLQTTGIRFASLMRELTRRNGGMFVGLNAFR 513
GSMF YAW +++ ++ TL +YP VKGIQ++NDMG+YMF+ Y GQWIPDTPGRR+ +++ L WN FSNSSPVEGI A+RTFY PDKKIS++V+GDEFTG SI +VVD VGT+N+ A G RVRIHA+GFPVQ PP+LQTTG+RFA+LMRELT RNGG FVGLN FR
Sbjct: 161 GSMFSYAWERMLRELEATLAIYPNVKGIQVLNDMGNYMFSRYRGQWIPDTPGRRQVILQNLRNWNVFSNSSPVEGITQAVRTFYDPDKKISIYVFGDEFTGESIAQVVDTVGTINREAADGEQRVRIHAVGFPVQFIRPPNLQTTGVRFATLMRELTYRNGGTFVGLNDFR 331
BLAST of mRNA_M-pyrifera_M_contig115992.3321.1 vs. uniprot
Match: UPI001E5FA2BD (VWA domain-containing protein n=1 Tax=Marinibactrum halimedae TaxID=1444977 RepID=UPI001E5FA2BD) HSP 1 Score: 254 bits (650), Expect = 4.310e-82 Identity = 116/171 (67.84%), Postives = 139/171 (81.29%), Query Frame = 1
Query: 1 GSMFRYAWPKVVEQIVETLEVYPRVKGIQIMNDMGSYMFTTYSGQWIPDTPGRRRAVIERLMQWNAFSNSSPVEGIMAAIRTFYSPDKKISLFVYGDEFTGRSIREVVDFVGTVNQRDASGAPRVRIHAIGFPVQAANPPHLQTTGIRFASLMRELTRRNGGMFVGLNAFR 513
GSMF Y W ++++++V L++YP VKGIQ+MNDMG YMF Y G+WIPDTPGRR +++RL WN FSNSSPVEGI AIRTFY PDKKISL+V GDEFTGRSI+ VVD V +N+++ G P VRIHA+GFPVQ A P +LQTTGIRFA+LMRELTRRNGG FVGLN +R
Sbjct: 164 GSMFNYGWDRMMQEMVNILDIYPNVKGIQVMNDMGDYMFKNYRGKWIPDTPGRREIILQRLRGWNPFSNSSPVEGIQKAIRTFYDPDKKISLYVLGDEFTGRSIKSVVDTVDRINKKNEKGEPMVRIHAVGFPVQFARPSNLQTTGIRFAALMRELTRRNGGTFVGLNDYR 334
BLAST of mRNA_M-pyrifera_M_contig115992.3321.1 vs. uniprot
Match: A0A1Z9U7X5_9GAMM (Uncharacterized protein n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Z9U7X5_9GAMM) HSP 1 Score: 254 bits (648), Expect = 7.890e-82 Identity = 121/171 (70.76%), Postives = 138/171 (80.70%), Query Frame = 1
Query: 1 GSMFRYAWPKVVEQIVETLEVYPRVKGIQIMNDMGSYMFTTYSGQWIPDTPGRRRAVIERLMQWNAFSNSSPVEGIMAAIRTFYSPDKKISLFVYGDEFTGRSIREVVDFVGTVNQRDASGAPRVRIHAIGFPVQAANPPHLQTTGIRFASLMRELTRRNGGMFVGLNAFR 513
GSMFRYAWPKV+ QI +TL VYP+VKG+QIMNDMG YMF ++ +WIPD+P RRRA+ ERL WNAFSNSSP EGI AI+TF + DKKIS++VYGDEFTG SIR VVD+V +N D G VRIHAIGFPVQ A P LQ TGIRFA+LMRELTR+NGG FVGLNAFR
Sbjct: 162 GSMFRYAWPKVIAQIEDTLRVYPKVKGVQIMNDMGVYMFPSFRSKWIPDSPARRRAINERLKTWNAFSNSSPAEGITEAIQTFNAEDKKISIYVYGDEFTGNSIRRVVDYVDKINHSDTPGENLVRIHAIGFPVQFAQPAQLQHTGIRFATLMRELTRKNGGTFVGLNAFR 332
BLAST of mRNA_M-pyrifera_M_contig115992.3321.1 vs. uniprot
Match: A0A3L7DYP8_9GAMM (VWA domain-containing protein n=4 Tax=Bacteria TaxID=2 RepID=A0A3L7DYP8_9GAMM) HSP 1 Score: 249 bits (635), Expect = 7.330e-80 Identity = 115/171 (67.25%), Postives = 135/171 (78.95%), Query Frame = 1
Query: 1 GSMFRYAWPKVVEQIVETLEVYPRVKGIQIMNDMGSYMFTTYSGQWIPDTPGRRRAVIERLMQWNAFSNSSPVEGIMAAIRTFYSPDKKISLFVYGDEFTGRSIREVVDFVGTVNQRDASGAPRVRIHAIGFPVQAANPPHLQTTGIRFASLMRELTRRNGGMFVGLNAFR 513
GSMF YAW +++++I TL +YP VKGIQ+MNDMG YMF+ Y GQWIPDTPGRR+ +++ L WN FSNSSPVEGI AAIRTFY P KKISL+V+GDEFTG SI +VV+ V +N+ DASG VRIH +GFPVQ PHLQTTGIRFA+LMREL RNGG FV LN FR
Sbjct: 161 GSMFSYAWDRMIQEIESTLAIYPEVKGIQVMNDMGQYMFSRYRGQWIPDTPGRRKVIMQNLRNWNVFSNSSPVEGITAAIRTFYDPGKKISLYVFGDEFTGESIAQVVETVDRINREDASGNRLVRIHGVGFPVQFIRAPHLQTTGIRFATLMRELAYRNGGTFVALNDFR 331
BLAST of mRNA_M-pyrifera_M_contig115992.3321.1 vs. uniprot
Match: A0A545U591_9GAMM (VWA domain-containing protein n=1 Tax=Exilibacterium tricleocarpae TaxID=2591008 RepID=A0A545U591_9GAMM) HSP 1 Score: 249 bits (635), Expect = 8.040e-80 Identity = 118/171 (69.01%), Postives = 136/171 (79.53%), Query Frame = 1
Query: 1 GSMFRYAWPKVVEQIVETLEVYPRVKGIQIMNDMGSYMFTTYSGQWIPDTPGRRRAVIERLMQWNAFSNSSPVEGIMAAIRTFYSPDKKISLFVYGDEFTGRSIREVVDFVGTVNQRDASGAPRVRIHAIGFPVQAANPPHLQTTGIRFASLMRELTRRNGGMFVGLNAFR 513
GSMF YAW +VV+++V TLE+YP+VKGIQ+MNDMG YMF+ Y GQWIPDTPGRR AVI RL WN FSNSSPVEGI A+RTFY P+KKISL+V+GD+F GRSIREVV V +N+ G VRIHA+GFPVQ P HLQTTG RFA+LMREL RNGG FVGLN +R
Sbjct: 162 GSMFDYAWDRVVDELVATLEIYPQVKGIQVMNDMGDYMFSNYRGQWIPDTPGRRSAVIRRLRTWNPFSNSSPVEGIQRAVRTFYDPNKKISLYVFGDDFRGRSIREVVKTVDRLNRERKPGERMVRIHAVGFPVQFTLPLHLQTTGFRFAALMRELAYRNGGTFVGLNDYR 332
BLAST of mRNA_M-pyrifera_M_contig115992.3321.1 vs. uniprot
Match: A0A5C8ZMW4_9GAMM (VWA domain-containing protein n=4 Tax=Parahaliea TaxID=1857932 RepID=A0A5C8ZMW4_9GAMM) HSP 1 Score: 248 bits (633), Expect = 1.470e-79 Identity = 114/171 (66.67%), Postives = 136/171 (79.53%), Query Frame = 1
Query: 1 GSMFRYAWPKVVEQIVETLEVYPRVKGIQIMNDMGSYMFTTYSGQWIPDTPGRRRAVIERLMQWNAFSNSSPVEGIMAAIRTFYSPDKKISLFVYGDEFTGRSIREVVDFVGTVNQRDASGAPRVRIHAIGFPVQAANPPHLQTTGIRFASLMRELTRRNGGMFVGLNAFR 513
GSMF Y+W +++ ++ TL +YP VKGIQI+NDMG+YMF+ Y GQWIPDTPGRR+ +++ L WN FSNSSPVEGI AIRTFY P KKIS++V+GDEFTG SI +VV V +N +A G RVRIHA+GFPVQ PPHLQTTGIRFA+LMRELT RNGG FVGLN FR
Sbjct: 161 GSMFSYSWDRMLAELEATLSIYPEVKGIQILNDMGNYMFSRYRGQWIPDTPGRRKVIMQNLRNWNVFSNSSPVEGITQAIRTFYDPGKKISIYVFGDEFTGESIAQVVGTVDRLNSENAEGRRRVRIHAVGFPVQFIRPPHLQTTGIRFATLMRELTYRNGGTFVGLNDFR 331
BLAST of mRNA_M-pyrifera_M_contig115992.3321.1 vs. uniprot
Match: UPI0016732DAF (VWA domain-containing protein n=1 Tax=Halioglobus pacificus TaxID=930806 RepID=UPI0016732DAF) HSP 1 Score: 248 bits (632), Expect = 2.150e-79 Identity = 115/171 (67.25%), Postives = 137/171 (80.12%), Query Frame = 1
Query: 1 GSMFRYAWPKVVEQIVETLEVYPRVKGIQIMNDMGSYMFTTYSGQWIPDTPGRRRAVIERLMQWNAFSNSSPVEGIMAAIRTFYSPDKKISLFVYGDEFTGRSIREVVDFVGTVNQRDASGAPRVRIHAIGFPVQAANPPHLQTTGIRFASLMRELTRRNGGMFVGLNAFR 513
GSMF Y+W +++E++ TL +YP VKGIQIMNDMG YMF+ Y QWIPDTPGRR +++ L WN FSNSSPVEGI AAIRTFY P+K IS++V+GDEFTG SI++VV V +N+ +ASG RVRIHA+GFPVQ PHLQTTGIRFA+LMRELT RNGG FVGLN FR
Sbjct: 162 GSMFSYSWERMMEELEATLSIYPEVKGIQIMNDMGQYMFSRYRNQWIPDTPGRRNVLMQNLRNWNVFSNSSPVEGITAAIRTFYDPNKNISIYVFGDEFTGNSIQQVVTTVDRLNRENASGQRRVRIHAVGFPVQFIRAPHLQTTGIRFATLMRELTYRNGGTFVGLNDFR 332
BLAST of mRNA_M-pyrifera_M_contig115992.3321.1 vs. uniprot
Match: UPI001409F368 (VWA domain-containing protein n=1 Tax=Pseudomaricurvus alcaniphilus TaxID=1166482 RepID=UPI001409F368) HSP 1 Score: 247 bits (631), Expect = 3.140e-79 Identity = 115/171 (67.25%), Postives = 137/171 (80.12%), Query Frame = 1
Query: 1 GSMFRYAWPKVVEQIVETLEVYPRVKGIQIMNDMGSYMFTTYSGQWIPDTPGRRRAVIERLMQWNAFSNSSPVEGIMAAIRTFYSPDKKISLFVYGDEFTGRSIREVVDFVGTVNQRDASGAPRVRIHAIGFPVQAANPPHLQTTGIRFASLMRELTRRNGGMFVGLNAFR 513
GSMF Y+W +++E++V TL++YP+VKGIQIMNDMG YMF Y G+WIPDTPGRR +I+RL WN FSNSSPVEGI A+R+FY P KKISL+V GDEFTG+SI VV+ V +N+ G VRIHA+GFPVQ A PPHLQTTGIRFA+LMRELT RNGG FVGLN +R
Sbjct: 161 GSMFNYSWERMLEELVATLQIYPQVKGIQIMNDMGDYMFPNYRGEWIPDTPGRRDIIIKRLRSWNPFSNSSPVEGIQKAVRSFYDPGKKISLYVMGDEFTGQSIETVVNTVDRLNKERRPGERMVRIHAVGFPVQFARPPHLQTTGIRFAALMRELTYRNGGTFVGLNDYR 331 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115992.3321.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig115992.3321.1 >prot_M-pyrifera_M_contig115992.3321.1 ID=prot_M-pyrifera_M_contig115992.3321.1|Name=mRNA_M-pyrifera_M_contig115992.3321.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=170bp MFRYAWPKVVEQIVETLEVYPRVKGIQIMNDMGSYMFTTYSGQWIPDTPGback to top mRNA from alignment at M-pyrifera_M_contig115992:47..562- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig115992.3321.1 ID=mRNA_M-pyrifera_M_contig115992.3321.1|Name=mRNA_M-pyrifera_M_contig115992.3321.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=516bp|location=Sequence derived from alignment at M-pyrifera_M_contig115992:47..562- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig115992:47..562- >mRNA_M-pyrifera_M_contig115992.3321.1 ID=mRNA_M-pyrifera_M_contig115992.3321.1|Name=mRNA_M-pyrifera_M_contig115992.3321.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1020bp|location=Sequence derived from alignment at M-pyrifera_M_contig115992:47..562- (Macrocystis pyrifera P11B4 male)back to top |