mRNA_M-pyrifera_M_contig115977.3316.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig115977.3316.1 vs. uniprot
Match: A0A2D9FXY1_9BACT (TetR family transcriptional regulator n=2 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D9FXY1_9BACT) HSP 1 Score: 162 bits (409), Expect = 9.410e-48 Identity = 72/140 (51.43%), Postives = 106/140 (75.71%), Query Frame = 1
Query: 1 QAGVEKIFPQVFEILSKDVSLIEKTTLIVDFYHSAFMDNPHLPSFVIFEMNQNPERFRTFFASHSFEIPEVFLHQVELEIEEGNIKPINPKQFLMNIISMCMMPMVARNLVQSLFKMDDDRYSGFLEERREMIPDLIFMG 420
QAG++K+ PQ+F IL ++ L EK IV+FYH F +N HLP+FV++EMNQ+PERF+ F + E+P+VF QV E+ EG +KPI+ +QFL+NI+SMCMMPM+A+ +V+++F +D+ Y+ FLEERR +IP++I G
Sbjct: 59 QAGIKKVMPQLFGILKSEMGLSEKVNEIVNFYHDMFRENQHLPTFVVYEMNQHPERFKEFLGVMNIELPDVFREQVNTEVSEGRMKPISAEQFLLNIVSMCMMPMLAKTMVKTIFALDEVAYANFLEERRALIPEIILNG 198
BLAST of mRNA_M-pyrifera_M_contig115977.3316.1 vs. uniprot
Match: A0A521EC18_9BACT (Transcriptional regulator, TetR family n=1 Tax=Gracilimonas mengyeensis TaxID=1302730 RepID=A0A521EC18_9BACT) HSP 1 Score: 160 bits (405), Expect = 3.800e-47 Identity = 75/140 (53.57%), Postives = 106/140 (75.71%), Query Frame = 1
Query: 1 QAGVEKIFPQVFEILSKDVSLIEKTTLIVDFYHSAFMDNPHLPSFVIFEMNQNPERFRTFFASHSFEIPEVFLHQVELEIEEGNIKPINPKQFLMNIISMCMMPMVARNLVQSLFKMDDDRYSGFLEERREMIPDLIFMG 420
QAGV+K+ PQ+F I+S ++SL EK +V+FYH F +N HLPSFV +EMNQ+PERF+ F ++ + +IP+VF Q+ E+E G + I P+QFLMNI+ M MMPMVA+ +VQ++F +D++ Y FLEERR++IP LIF G
Sbjct: 59 QAGVKKVMPQLFGIISSELSLQEKVEKVVNFYHDMFWENQHLPSFVTYEMNQHPERFQEFMSNMNIKIPDVFADQIRKEVEAGRMADIPPRQFLMNIVGMSMMPMVAKKMVQTIFSLDEEGYFEFLEERRKLIPILIFKG 198
BLAST of mRNA_M-pyrifera_M_contig115977.3316.1 vs. uniprot
Match: A0A3D1GCE2_9BACT (TetR/AcrR family transcriptional regulator n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A3D1GCE2_9BACT) HSP 1 Score: 156 bits (395), Expect = 1.320e-45 Identity = 69/140 (49.29%), Postives = 102/140 (72.86%), Query Frame = 1
Query: 1 QAGVEKIFPQVFEILSKDVSLIEKTTLIVDFYHSAFMDNPHLPSFVIFEMNQNPERFRTFFASHSFEIPEVFLHQVELEIEEGNIKPINPKQFLMNIISMCMMPMVARNLVQSLFKMDDDRYSGFLEERREMIPDLIFMG 420
+ GV+K+ P +F+I++KD++L +KT +V FYH F +PHLP FV+ EM+Q+PERF+ F +IP+ FL QV ++EG + PI P QFL+N++S+CM P +A+N+V ++F+M DD Y F++ER EMIPDLIF G
Sbjct: 61 KTGVKKVLPALFQIINKDLTLYDKTVEVVRFYHDLFRRSPHLPMFVLHEMHQHPERFKEFIGEFRQKIPQTFLDQVNKAVQEGKLVPIKPHQFLINVLSLCMFPAIAKNMVVTIFEMSDDDYEAFMKEREEMIPDLIFKG 200
BLAST of mRNA_M-pyrifera_M_contig115977.3316.1 vs. uniprot
Match: UPI001EDC61DE (TetR/AcrR family transcriptional regulator n=1 Tax=Rhodohalobacter sp. WB101 TaxID=2911366 RepID=UPI001EDC61DE) HSP 1 Score: 155 bits (391), Expect = 4.860e-45 Identity = 72/143 (50.35%), Postives = 102/143 (71.33%), Query Frame = 1
Query: 1 QAGVEKIFPQVFEILSKDVSLIEKTTLIVDFYHSAFMDNPHLPSFVIFEMNQNPERFRTFFASHSFEIPEVFLHQVELEIEEGNIKPINPKQFLMNIISMCMMPMVARNLVQSLFKMDDDRYSGFLEERREMIPDLIFMGAST 429
Q+ V+K+FPQ+ ILS L K +V+FY++ F NP+LPSFV+ EMNQ+P+RF+ F S + IP+ F Q+E EIE+G I P+ P FL+NI+S+C+MP++AR LVQ+LF +DDD + FL ER+E+IP +IF G T
Sbjct: 59 QSSVKKVFPQLIAILSSGDELEAKVKKVVEFYYNTFRKNPYLPSFVLHEMNQHPKRFKEFINSQNIRIPKEFAEQLETEIEKGRIMPMKPTHFLINIVSLCLMPVIARTLVQTLFSLDDDDFDAFLAERKELIPKVIFSGVQT 201
BLAST of mRNA_M-pyrifera_M_contig115977.3316.1 vs. uniprot
Match: UPI000369F60E (TetR/AcrR family transcriptional regulator n=1 Tax=Gracilimonas tropica TaxID=454600 RepID=UPI000369F60E) HSP 1 Score: 152 bits (385), Expect = 4.050e-44 Identity = 71/140 (50.71%), Postives = 102/140 (72.86%), Query Frame = 1
Query: 1 QAGVEKIFPQVFEILSKDVSLIEKTTLIVDFYHSAFMDNPHLPSFVIFEMNQNPERFRTFFASHSFEIPEVFLHQVELEIEEGNIKPINPKQFLMNIISMCMMPMVARNLVQSLFKMDDDRYSGFLEERREMIPDLIFMG 420
+AGV KI PQ+F IL ++ + +K IV FYH F +N HLPSFV++EMNQ+PERF F + +PEVF QV E+++G +K I+ +QFL+NI+SMCMMPM+AR +V+++F +D+ YS LEER+ +IP++IF G
Sbjct: 59 RAGVRKIMPQLFGILKSELPIEQKVQDIVVFYHEMFKENRHLPSFVVYEMNQHPERFTEFIEGMNIHLPEVFTKQVNTEVQQGRMKNISSEQFLLNIVSMCMMPMLARTMVKTIFSLDEKGYSDLLEERKALIPEIIFNG 198
BLAST of mRNA_M-pyrifera_M_contig115977.3316.1 vs. uniprot
Match: A0A6I7NTG1_9BACT (TetR/AcrR family transcriptional regulator n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A6I7NTG1_9BACT) HSP 1 Score: 152 bits (384), Expect = 5.570e-44 Identity = 71/140 (50.71%), Postives = 100/140 (71.43%), Query Frame = 1
Query: 1 QAGVEKIFPQVFEILSKDVSLIEKTTLIVDFYHSAFMDNPHLPSFVIFEMNQNPERFRTFFASHSFEIPEVFLHQVELEIEEGNIKPINPKQFLMNIISMCMMPMVARNLVQSLFKMDDDRYSGFLEERREMIPDLIFMG 420
QAG IFP + +IL ++ + +K IVDFY+S F NP LP+FV+ EMN+NP++FR F S + IP+ F Q++ E+E G + P+ P FLMN++SMCMMPMVAR +VQ++F++DD+ Y FLEER+EMI +IF G
Sbjct: 59 QAGAANIFPSLIKILESEMPIRQKVEEIVDFYYSIFRTNPFLPAFVVHEMNRNPKQFREFIMSLNIRIPKKFSEQIKSEVEGGRMMPLKPHHFLMNVVSMCMMPMVARQMVQAIFRLDDEMYWEFLEERKEMISKIIFSG 198
BLAST of mRNA_M-pyrifera_M_contig115977.3316.1 vs. uniprot
Match: UPI001F39E22E (TetR/AcrR family transcriptional regulator n=1 Tax=Rhodohalobacter sp. 614A TaxID=2908649 RepID=UPI001F39E22E) HSP 1 Score: 151 bits (381), Expect = 1.580e-43 Identity = 69/140 (49.29%), Postives = 105/140 (75.00%), Query Frame = 1
Query: 1 QAGVEKIFPQVFEILSKDVSLIEKTTLIVDFYHSAFMDNPHLPSFVIFEMNQNPERFRTFFASHSFEIPEVFLHQVELEIEEGNIKPINPKQFLMNIISMCMMPMVARNLVQSLFKMDDDRYSGFLEERREMIPDLIFMG 420
Q+ V+KIFP + ILS D L K +V+FY++ F NP+LPSFVI EMNQ+P+RF+ F +S EIP F +Q++ EI++G I P+ P FL+NI+S+C+MP++AR +VQ+LF +DD+++ FLEER++++P++IF G
Sbjct: 59 QSSVKKIFPGLVSILSSDDELQAKVKRVVEFYYTMFRKNPYLPSFVIHEMNQHPKRFKEFISSLEIEIPSKFANQLQDEIDQGKILPMKPIHFLINIVSLCLMPVIARTMVQTLFSLDDEQFDQFLEERKDLVPEIIFNG 198
BLAST of mRNA_M-pyrifera_M_contig115977.3316.1 vs. uniprot
Match: A0A2A2G703_9BACT (TetR family transcriptional regulator n=1 Tax=Aliifodinibius sp. WN023 TaxID=2032627 RepID=A0A2A2G703_9BACT) HSP 1 Score: 132 bits (332), Expect = 4.010e-36 Identity = 56/137 (40.88%), Postives = 96/137 (70.07%), Query Frame = 1
Query: 1 QAGVEKIFPQVFEILSKDVSLIEKTTLIVDFYHSAFMDNPHLPSFVIFEMNQNPERFRTFFASHSFEIPEVFLHQVELEIEEGNIKPINPKQFLMNIISMCMMPMVARNLVQSLFKMDDDRYSGFLEERREMIPDLI 411
Q + + FP++ ++L+ D++L+ K +V+ Y+ F +PHLP FVI EMNQ+P+RFR F FEIPE F+ Q++ EI G ++ I+P++F++N I +C+ P++AR +V+++F M +D+Y FLE+R++ +P I
Sbjct: 59 QDSIRQFFPEILKVLNADLALVPKIEKLVETYYEMFKKHPHLPRFVIHEMNQHPDRFRGFVRKEGFEIPERFVEQIKTEIASGTMRKIDPREFIINTIGLCVFPLIARPMVETVFDMSEDQYRQFLEQRKKELPKFI 195
BLAST of mRNA_M-pyrifera_M_contig115977.3316.1 vs. uniprot
Match: A0A6M1SZ38_9BACT (TetR/AcrR family transcriptional regulator n=1 Tax=Balneolaceae bacterium YR4-1 TaxID=2709311 RepID=A0A6M1SZ38_9BACT) HSP 1 Score: 125 bits (315), Expect = 1.470e-33 Identity = 53/137 (38.69%), Postives = 96/137 (70.07%), Query Frame = 1
Query: 1 QAGVEKIFPQVFEILSKDVSLIEKTTLIVDFYHSAFMDNPHLPSFVIFEMNQNPERFRTFFASHSFEIPEVFLHQVELEIEEGNIKPINPKQFLMNIISMCMMPMVARNLVQSLFKMDDDRYSGFLEERREMIPDLI 411
Q + + FP++F++L+ ++ K +V+ Y++ F +PHLP FVI EMNQ+PERF+ F + +IP F+ Q+E E++ G IK I+P+QF++N I +C+ P++A+ +++++F+MDD +++ FLE R++ +P I
Sbjct: 59 QQSIREFFPKIFKVLNGEMEFEAKIEKLVETYYTMFRSHPHLPRFVIHEMNQHPERFQYFMRNIGIKIPARFIEQIEREVKSGRIKKIDPRQFIINTIGLCVFPVIAKPMIETVFEMDDKQFNDFLEHRKKELPVFI 195
BLAST of mRNA_M-pyrifera_M_contig115977.3316.1 vs. uniprot
Match: A0A1G7D3Z2_9FLAO (Transcriptional regulator, TetR family n=1 Tax=Pricia antarctica TaxID=641691 RepID=A0A1G7D3Z2_9FLAO) HSP 1 Score: 108 bits (270), Expect = 8.280e-27 Identity = 52/139 (37.41%), Postives = 86/139 (61.87%), Query Frame = 1
Query: 13 EKIFPQVFEILSKDVSLIEKTTLIVDFYHSAFMDNPHLPSFVIFEMNQNPERFRTFFASHSFEIPEVFLHQVELEIEEGNIKPINPKQFLMNIISMCMMPMVARNLVQSLFKMDDDRYSGFLEERREMIPDLIFMGAST 429
+K P V I + + S+ EK D Y S ++NP+LP+F+I E+N NPE TFF ++S P +F Q+ EIE+G ++P++PKQ L+N+ S+C P V L++ + K+D + ++ +EER++++P LI T
Sbjct: 62 QKFAPHVNGIFNSEASVFEKIKGFADSYISFVIENPYLPTFLIQEININPEFAETFFTANSAPDPALFEKQIAEEIEKGILRPVDPKQLLLNLFSLCAFPFVGSGLIKGILKLDKESFNTMMEERKKLVPQLIINSIKT 200 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115977.3316.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig115977.3316.1 >prot_M-pyrifera_M_contig115977.3316.1 ID=prot_M-pyrifera_M_contig115977.3316.1|Name=mRNA_M-pyrifera_M_contig115977.3316.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=148bp QAGVEKIFPQVFEILSKDVSLIEKTTLIVDFYHSAFMDNPHLPSFVIFEMback to top mRNA from alignment at M-pyrifera_M_contig115977:3..446+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig115977.3316.1 ID=mRNA_M-pyrifera_M_contig115977.3316.1|Name=mRNA_M-pyrifera_M_contig115977.3316.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=444bp|location=Sequence derived from alignment at M-pyrifera_M_contig115977:3..446+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig115977:3..446+ >mRNA_M-pyrifera_M_contig115977.3316.1 ID=mRNA_M-pyrifera_M_contig115977.3316.1|Name=mRNA_M-pyrifera_M_contig115977.3316.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=888bp|location=Sequence derived from alignment at M-pyrifera_M_contig115977:3..446+ (Macrocystis pyrifera P11B4 male)back to top |