mRNA_M-pyrifera_M_contig115972.3313.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig115972.3313.1
Unique NamemRNA_M-pyrifera_M_contig115972.3313.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig115972.3313.1 vs. uniprot
Match: A0A8J9XDI1_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9XDI1_PHATR)

HSP 1 Score: 213 bits (541), Expect = 1.830e-64
Identity = 103/172 (59.88%), Postives = 131/172 (76.16%), Query Frame = 1 
Query:    1 TGTDEHGQKIAATAAAEGVTPLEVSTKYAEKFQALNAQLLVSNDDFIRTTEARHKECAQWLLQRAQAAGDVYQEVYRGWYNVKEEAFVTEKDAEAADYKDPSSGQALVQMEEDSYFFRMSKYQARLVEHLRAHPEWIQPAQARELILSRLEGDELRDLSISRTTFAWGIPFP 516
            TG DEHGQKIA TAA  G  P+++  +Y   FQ LN ++L++NDD++RTT ARHK+ AQ L QR   AGD+Y + Y GWYNV+EE FVT+ +A+  DYKDP+SG  L Q+EE+SYFF+MSKY A+LV H+ ++PE+IQP   R  IL+RL  DELRDLSISRTTF+WGIP P
Sbjct:  152 TGADEHGQKIAQTAADAGKVPIDICDQYVTGFQVLNQRILIANDDYVRTTSARHKQLAQTLWQRCADAGDIYLDTYSGWYNVREETFVTDMEAQQLDYKDPTSGLPLKQVEEESYFFKMSKYHAQLVAHIESNPEFIQPDAHRNQILARLHTDELRDLSISRTTFSWGIPVP 323
[Close]
BLAST of mRNA_M-pyrifera_M_contig115972.3313.1 vs. uniprot
Match: A0A1V9YFS6_9STRA (Methionine--tRNA ligase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YFS6_9STRA)

HSP 1 Score: 210 bits (534), Expect = 4.970e-61
Identity = 105/174 (60.34%), Postives = 132/174 (75.86%), Query Frame = 1 
Query:    1 TGTDEHGQKIAATAAAEGVTPLEVSTKYAEKFQALNAQLLVSNDDFIRTTEARHKECAQWLLQRAQAAGDVYQEVYRGWYNVKEEAFVTEKDAEAADYKDPSSGQALVQMEEDSYFFRMSKYQARLVEHLRAHPEWIQPAQARELILSRLEGDELRDLSISRTTFAWGIPFPDD 522
            TGTDEHGQKIA TA A+G+TP+++  KY+  FQ L   L +SNDDFIRTT  RHK+  Q++  RAQA GD+Y+  Y GWYNV+EE FVTE +A   +YKDP+SG  L +M+E+SYFF+MSKYQ RL++H  AHPE++QP  AR+ IL RLE + L DLS SRTTF+ GIP PDD
Sbjct:   77 TGTDEHGQKIAQTAEAQGMTPIQLCDKYSGLFQQLTKDLNMSNDDFIRTTSDRHKKFCQYIFARAQANGDIYKGTYEGWYNVREETFVTENEAALTNYKDPTSGLDLKKMQEESYFFKMSKYQQRLIDHFHAHPEFLQPETARQAILKRLE-EPLLDLSASRTTFSHGIPLPDD 249
[Close]
BLAST of mRNA_M-pyrifera_M_contig115972.3313.1 vs. uniprot
Match: A0A7S2YTJ8_9STRA (Methionine--tRNA ligase (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YTJ8_9STRA)

HSP 1 Score: 209 bits (532), Expect = 5.480e-61
Identity = 100/173 (57.80%), Postives = 132/173 (76.30%), Query Frame = 1 
Query:    1 TGTDEHGQKIAATAAAEGVTPLEVSTKYAEKFQALNAQLLVSNDDFIRTTEARHKECAQWLLQRAQAAGDVYQEVYRGWYNVKEEAFVTEKDAEAADYKDPSSGQALVQMEEDSYFFRMSKYQARLVEHLRAHPEWIQPAQARELILSRLEGDELRDLSISRTTFAWGIPFPD 519
            TGTDEHGQKIA TAA +G  P+++   Y+  F+ LN +LL++NDD++RTT  RHK+ AQ L ++   AGD+Y + Y GWYNV+EE FVTE DA+  D+KDP+SG+ L +++E+SYFF+MSKYQ  L+ H+ A+P +IQP   R LIL RL  DELRDLSISRTTF+WGIP P+
Sbjct:  146 TGTDEHGQKIAQTAADQGKQPIDICNLYSTGFRVLNQRLLITNDDYVRTTSDRHKKTAQALWKKCAEAGDIYLDTYSGWYNVREETFVTESDAKLTDFKDPTSGKPLKKVQEESYFFKMSKYQKDLIAHIEANPLFIQPEMHRNLILQRLRSDELRDLSISRTTFSWGIPVPE 318
[Close]
BLAST of mRNA_M-pyrifera_M_contig115972.3313.1 vs. uniprot
Match: A0A7S3LA29_9STRA (Methionine--tRNA ligase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LA29_9STRA)

HSP 1 Score: 209 bits (533), Expect = 2.710e-60
Identity = 101/173 (58.38%), Postives = 135/173 (78.03%), Query Frame = 1 
Query:    1 TGTDEHGQKIAATAAAEGVTPLEVSTKYAEKFQALNAQLLVSNDDFIRTTEARHKECAQWLLQRAQAAGDVYQEVYRGWYNVKEEAFVTEKDAEAADYKDPSSGQALVQMEEDSYFFRMSKYQARLVEHLRAHPEWIQPAQARELILSRLEGDELRDLSISRTTFAWGIPFPD 519
            TG+DEHGQKIA TAAAEG+ PL +  K+   FQ LN +  VS DD++RTT  RHK  AQ L +R  AAGD+Y + Y GWYN++EE FVT+ +A+ +D+KDP+SGQ L ++EE+SYFF+MSKY  +LV+H+  +P++IQP Q R +IL+RL+ D+LRDLSISRTTF+WGIP P+
Sbjct:  153 TGSDEHGQKIANTAAAEGIDPLTMCNKFVTGFQVLNQRTKVSFDDYVRTTSDRHKRTAQALWKRCHAAGDIYLDKYSGWYNIREETFVTDNEAQLSDFKDPASGQPLKRVEEESYFFKMSKYHDQLVKHIEDNPKFIQPEQHRNMILTRLKQDDLRDLSISRTTFSWGIPVPE 325
[Close]
BLAST of mRNA_M-pyrifera_M_contig115972.3313.1 vs. uniprot
Match: A0A067C825_SAPPC (Methionine--tRNA ligase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C825_SAPPC)

HSP 1 Score: 208 bits (529), Expect = 2.760e-60
Identity = 107/174 (61.49%), Postives = 129/174 (74.14%), Query Frame = 1 
Query:    1 TGTDEHGQKIAATAAAEGVTPLEVSTKYAEKFQALNAQLLVSNDDFIRTTEARHKECAQWLLQRAQAAGDVYQEVYRGWYNVKEEAFVTEKDAEAADYKDPSSGQALVQMEEDSYFFRMSKYQARLVEHLRAHPEWIQPAQARELILSRLEGDELRDLSISRTTFAWGIPFPDD 522
            TGTDEHGQKIA TA A G+TP ++  KY+  FQ L   L +SNDDFIRTT  RHK   Q++  RAQA GD+Y+  Y GWYNV+EE FVTE +A   +YKDP+SG  L +M+E+SYFF+MSKYQ RLVEH  AHPE++QP  AR+ IL RLE + L DLS SRTTF+ GIP PDD
Sbjct:   77 TGTDEHGQKIAQTAEAAGMTPQQLCDKYSGLFQQLAKDLNMSNDDFIRTTSDRHKSFCQYIFGRAQANGDIYKGTYEGWYNVREETFVTENEAAQTNYKDPTSGLDLKKMQEESYFFKMSKYQKRLVEHFHAHPEFLQPETARQAILKRLE-EPLHDLSASRTTFSHGIPLPDD 249
[Close]
BLAST of mRNA_M-pyrifera_M_contig115972.3313.1 vs. uniprot
Match: A0A485LGS9_9STRA (Methionine--tRNA ligase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LGS9_9STRA)

HSP 1 Score: 206 bits (523), Expect = 1.920e-59
Identity = 105/174 (60.34%), Postives = 130/174 (74.71%), Query Frame = 1 
Query:    1 TGTDEHGQKIAATAAAEGVTPLEVSTKYAEKFQALNAQLLVSNDDFIRTTEARHKECAQWLLQRAQAAGDVYQEVYRGWYNVKEEAFVTEKDAEAADYKDPSSGQALVQMEEDSYFFRMSKYQARLVEHLRAHPEWIQPAQARELILSRLEGDELRDLSISRTTFAWGIPFPDD 522
            TGTDEHGQKIA TA A+G+TPLE+  KY+  FQ L   L +SND FIRTT  +HK+ AQ+L  RA+  GD+Y+  Y GWYNV+EE FVTE +A+  DYKDP+SG  L +M+E SYFFRMSKYQ RLV H  AHPE++QP   R++IL RLE + L DLS SRTTF+ G+P P+D
Sbjct:   68 TGTDEHGQKIAQTAEAQGMTPLELCDKYSGIFQQLAKDLNMSNDHFIRTTSKQHKDFAQYLFNRAEENGDIYKGTYEGWYNVREETFVTETEAQQTDYKDPTSGTPLKKMQESSYFFRMSKYQERLVAHYHAHPEFLQPEVHRQIILKRLE-EPLLDLSASRTTFSHGVPLPND 240
[Close]
BLAST of mRNA_M-pyrifera_M_contig115972.3313.1 vs. uniprot
Match: A0A1V9YX34_9STRA (Methionine--tRNA ligase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YX34_9STRA)

HSP 1 Score: 205 bits (521), Expect = 3.930e-59
Identity = 104/174 (59.77%), Postives = 130/174 (74.71%), Query Frame = 1 
Query:    1 TGTDEHGQKIAATAAAEGVTPLEVSTKYAEKFQALNAQLLVSNDDFIRTTEARHKECAQWLLQRAQAAGDVYQEVYRGWYNVKEEAFVTEKDAEAADYKDPSSGQALVQMEEDSYFFRMSKYQARLVEHLRAHPEWIQPAQARELILSRLEGDELRDLSISRTTFAWGIPFPDD 522
            TGTDEHGQKIA TA A G+TP ++  KY+  FQ L   L +SNDDFIRTT  RHK+  Q++ +RAQ  GD+Y+  Y GWYNV+EE FVTE +A   +YKDP+SG  L +M+E+SYFF+MSKYQ RLVEH  A+P+++QP  AR+ IL RLE + L DLS SRTTF+ GIP PDD
Sbjct:   77 TGTDEHGQKIAQTAEAAGMTPQQLCDKYSGLFQQLTKDLNMSNDDFIRTTSDRHKKFCQYIFKRAQDNGDIYKGTYEGWYNVREETFVTENEAAQTNYKDPTSGVPLKKMQEESYFFKMSKYQKRLVEHFHANPDFLQPENARQAILKRLE-EPLHDLSASRTTFSHGIPLPDD 249
[Close]
BLAST of mRNA_M-pyrifera_M_contig115972.3313.1 vs. uniprot
Match: A0A7S4RCK1_9STRA (Methionine--tRNA ligase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RCK1_9STRA)

HSP 1 Score: 202 bits (515), Expect = 5.960e-59
Identity = 96/173 (55.49%), Postives = 131/173 (75.72%), Query Frame = 1 
Query:    1 TGTDEHGQKIAATAAAEGVTPLEVSTKYAEKFQALNAQLLVSNDDFIRTTEARHKECAQWLLQRAQAAGDVYQEVYRGWYNVKEEAFVTEKDAEAADYKDPSSGQALVQMEEDSYFFRMSKYQARLVEHLRAHPEWIQPAQARELILSRLEGDELRDLSISRTTFAWGIPFPD 519
            TGTDEHG+KIA TA  +G  P+++  K+A  FQ LN ++L+SNDD++RTT ARHK  AQ L ++  A GD+Y + Y GWYNV+EE FVTE DA+ ADYKDP++G  L +++E+SYFF+MS+Y  +LV+H+  +P +I+P   R  IL+RL  D LRDLSISRT+F+WGIP P+
Sbjct:    4 TGTDEHGEKIAKTAEGQGKEPIDICDKFATGFQVLNQRILISNDDYLRTTSARHKRTAQELWKKCAANGDIYLDTYTGWYNVREETFVTESDAQLADYKDPTTGLPLKKVKEESYFFKMSEYHDKLVKHIEDNPNFIRPEGHRNQILTRLNSDRLRDLSISRTSFSWGIPVPE 176
[Close]
BLAST of mRNA_M-pyrifera_M_contig115972.3313.1 vs. uniprot
Match: A0A2C6LCD4_9APIC (Methionyl-trna synthetase n=1 Tax=Cystoisospora suis TaxID=483139 RepID=A0A2C6LCD4_9APIC)

HSP 1 Score: 200 bits (509), Expect = 1.130e-58
Identity = 102/174 (58.62%), Postives = 123/174 (70.69%), Query Frame = 1 
Query:    1 TGTDEHGQKIAATAAAEGVTPLEVSTKYAEKFQALNAQLLVSNDDFIRTTEARHKECAQWLLQRAQAAGDVYQEVYRGWYNVKEEAFVTEKDAEAADYKDPSSGQALVQMEEDSYFFRMSKYQARLVEHLRAHPEWIQPAQARELILSRLEGDELRDLSISRTTFAWGIPFPDD 522
            TG DEHGQKIA TA   G  P E+   Y   FQ +N +L +SND +IRTT   H+   QWL +R Q  GD+Y + Y GWYN +EE FVTE +A AADYKDP SG+ L +MEE SYFFRMSKYQARLV+H++ HPE+IQP + R  IL RLE + L DLS SRTTF+WG+P P D
Sbjct:  281 TGADEHGQKIANTAERSGKKPQEMCDLYVSGFQDMNKRLHISNDFYIRTTSPEHQAVCQWLWKRVQEKGDIYLDTYTGWYNEREETFVTENEARAADYKDPVSGKPLQKMEEPSYFFRMSKYQARLVDHIQKHPEFIQPEERRRNILRRLE-EPLLDLSCSRTTFSWGVPVPGD 453
[Close]
BLAST of mRNA_M-pyrifera_M_contig115972.3313.1 vs. uniprot
Match: A0A7S4RC46_9STRA (Methionine--tRNA ligase n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RC46_9STRA)

HSP 1 Score: 202 bits (515), Expect = 1.840e-58
Identity = 96/173 (55.49%), Postives = 131/173 (75.72%), Query Frame = 1 
Query:    1 TGTDEHGQKIAATAAAEGVTPLEVSTKYAEKFQALNAQLLVSNDDFIRTTEARHKECAQWLLQRAQAAGDVYQEVYRGWYNVKEEAFVTEKDAEAADYKDPSSGQALVQMEEDSYFFRMSKYQARLVEHLRAHPEWIQPAQARELILSRLEGDELRDLSISRTTFAWGIPFPD 519
            TGTDEHG+KIA TA  +G  P+++  K+A  FQ LN ++L+SNDD++RTT ARHK  AQ L ++  A GD+Y + Y GWYNV+EE FVTE DA+ ADYKDP++G  L +++E+SYFF+MS+Y  +LV+H+  +P +I+P   R  IL+RL  D LRDLSISRT+F+WGIP P+
Sbjct:    4 TGTDEHGEKIAKTAEGQGKEPIDICDKFATGFQVLNQRILISNDDYLRTTSARHKRTAQELWKKCAANGDIYLDTYTGWYNVREETFVTESDAQLADYKDPTTGLPLKKVKEESYFFKMSEYHDKLVKHIEDNPNFIRPEGHRNQILTRLNSDRLRDLSISRTSFSWGIPVPE 176
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115972.3313.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J9XDI1_PHATR1.830e-6459.88Hypothetical protein (Fragment) n=2 Tax=Phaeodacty... [more]
A0A1V9YFS6_9STRA4.970e-6160.34Methionine--tRNA ligase n=1 Tax=Achlya hypogyna Ta... [more]
A0A7S2YTJ8_9STRA5.480e-6157.80Methionine--tRNA ligase (Fragment) n=1 Tax=Amphipr... [more]
A0A7S3LA29_9STRA2.710e-6058.38Methionine--tRNA ligase n=1 Tax=Amphora coffeiform... [more]
A0A067C825_SAPPC2.760e-6061.49Methionine--tRNA ligase n=2 Tax=Saprolegnia TaxID=... [more]
A0A485LGS9_9STRA1.920e-5960.34Methionine--tRNA ligase n=1 Tax=Aphanomyces stella... [more]
A0A1V9YX34_9STRA3.930e-5959.77Methionine--tRNA ligase n=1 Tax=Thraustotheca clav... [more]
A0A7S4RCK1_9STRA5.960e-5955.49Methionine--tRNA ligase n=1 Tax=Ditylum brightwell... [more]
A0A2C6LCD4_9APIC1.130e-5858.62Methionyl-trna synthetase n=1 Tax=Cystoisospora su... [more]
A0A7S4RC46_9STRA1.840e-5855.49Methionine--tRNA ligase n=3 Tax=Ditylum brightwell... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig115972contigM-pyrifera_M_contig115972:6..527 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score217.6
Seed ortholog evalue4.5e-54
Seed eggNOG ortholog2850.Phatr26837
Preferred nameMSM1
KEGG rclassRC00055,RC00523
KEGG koko:K01874
KEGG ReactionR03659,R04773
KEGG Pathwayko00450,ko00970,map00450,map00970
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0031974,GO:0032543,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140053,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.Belongs to the class-I aminoacyl-tRNA synthetase family
EggNOG OGs2XAJ3@2836,COG0143@1,KOG0436@2759
EC6.1.1.10
COG Functional cat.J
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Exons1
Model size522
Cds size522
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815676.1414754-CDS-M-pyrifera_M_contig115972:5..5271622815676.1414754-CDS-M-pyrifera_M_contig115972:5..527Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig115972 6..527 -
1692277516.7074506-CDS-M-pyrifera_M_contig115972:5..5271692277516.7074506-CDS-M-pyrifera_M_contig115972:5..527Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig115972 6..527 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig115972.3313.1prot_M-pyrifera_M_contig115972.3313.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig115972 6..527 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig115972.3313.1

>prot_M-pyrifera_M_contig115972.3313.1 ID=prot_M-pyrifera_M_contig115972.3313.1|Name=mRNA_M-pyrifera_M_contig115972.3313.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=174bp
TGTDEHGQKIAATAAAEGVTPLEVSTKYAEKFQALNAQLLVSNDDFIRTT
EARHKECAQWLLQRAQAAGDVYQEVYRGWYNVKEEAFVTEKDAEAADYKD
PSSGQALVQMEEDSYFFRMSKYQARLVEHLRAHPEWIQPAQARELILSRL
EGDELRDLSISRTTFAWGIPFPDD
back to top

mRNA from alignment at M-pyrifera_M_contig115972:6..527-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig115972.3313.1 ID=mRNA_M-pyrifera_M_contig115972.3313.1|Name=mRNA_M-pyrifera_M_contig115972.3313.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=522bp|location=Sequence derived from alignment at M-pyrifera_M_contig115972:6..527- (Macrocystis pyrifera P11B4 male)
ACGGGCACGGACGAGCACGGCCAGAAGATCGCGGCGACTGCGGCGGCAGA
GGGCGTGACGCCGCTGGAGGTGTCGACGAAGTACGCAGAGAAGTTCCAGG
CGCTCAACGCACAGCTCTTGGTGTCGAACGACGACTTCATCCGCACGACG
GAGGCGCGGCACAAGGAGTGTGCGCAGTGGCTGCTGCAGAGGGCGCAGGC
CGCGGGCGACGTCTACCAGGAGGTGTACCGCGGCTGGTACAACGTCAAGG
AGGAGGCCTTCGTGACGGAGAAGGACGCGGAGGCGGCGGACTACAAGGAC
CCCAGCAGCGGCCAGGCGCTCGTGCAGATGGAGGAGGACTCCTACTTCTT
CCGCATGTCCAAGTACCAGGCGCGCCTCGTCGAGCACCTGCGCGCGCACC
CAGAGTGGATCCAGCCGGCCCAGGCGCGCGAGCTGATTCTCTCGCGCCTC
GAGGGCGACGAGCTGCGCGACCTCTCCATCTCGCGCACGACCTTTGCCTG
GGGCATTCCCTTCCCCGACGAC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig115972:6..527-

>mRNA_M-pyrifera_M_contig115972.3313.1 ID=mRNA_M-pyrifera_M_contig115972.3313.1|Name=mRNA_M-pyrifera_M_contig115972.3313.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1044bp|location=Sequence derived from alignment at M-pyrifera_M_contig115972:6..527- (Macrocystis pyrifera P11B4 male)
ACGGGCACGGACGAGCACGGCCAGAAGATCGCGGCGACTGCGGCGGCAGA
GGGCGTGACGCCGCTGGAGGTGTCGACGAAGTACGCAGAGAAGTTCCAGG
CGCTCAACGCACAGCTCTTGGTGTCGAACGACGACTTCATCCGCACGACG
GAGGCGCGGCACAAGGAGTGTGCGCAGTGGCTGCTGCAGAGGGCGCAGGC
CGCGGGCGACGTCTACCAGGAGGTGTACCGCGGCTGGTACAACGTCAAGG
AGGAGGCCTTCGTGACGGAGAAGGACGCGGAGGCGGCGGACTACAAGGAC
CCCAGCAGCGGCCAGGCGCTCGTGCAGATGGAGGAGGACTCCTACTTCTT
CCGCATGTCCAAGTACCAGGCGCGCCTCGTCGAGCACCTGCGCGCGCACC
CAGAGTGGATCCAGCCGGCCCAGGCGCGCGAGCTGATTCTCTCGCGCCTC
GAGGGCGACGAGCTGCGCGACCTCTCCATCTCGCGCACGACCTTTGCCTG
GGGCATTCCCTTCCCCGACGACACGGGCACGGACGAGCACGGCCAGAAGA
TCGCGGCGACTGCGGCGGCAGAGGGCGTGACGCCGCTGGAGGTGTCGACG
AAGTACGCAGAGAAGTTCCAGGCGCTCAACGCACAGCTCTTGGTGTCGAA
CGACGACTTCATCCGCACGACGGAGGCGCGGCACAAGGAGTGTGCGCAGT
GGCTGCTGCAGAGGGCGCAGGCCGCGGGCGACGTCTACCAGGAGGTGTAC
CGCGGCTGGTACAACGTCAAGGAGGAGGCCTTCGTGACGGAGAAGGACGC
GGAGGCGGCGGACTACAAGGACCCCAGCAGCGGCCAGGCGCTCGTGCAGA
TGGAGGAGGACTCCTACTTCTTCCGCATGTCCAAGTACCAGGCGCGCCTC
GTCGAGCACCTGCGCGCGCACCCAGAGTGGATCCAGCCGGCCCAGGCGCG
CGAGCTGATTCTCTCGCGCCTCGAGGGCGACGAGCTGCGCGACCTCTCCA
TCTCGCGCACGACCTTTGCCTGGGGCATTCCCTTCCCCGACGAC
back to top