mRNA_M-pyrifera_M_contig115918.3307.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig115918.3307.1 vs. uniprot
Match: A0A2E7KC45_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Gimesia sp. TaxID=2024833 RepID=A0A2E7KC45_9PLAN) HSP 1 Score: 355 bits (910), Expect = 4.450e-110 Identity = 183/187 (97.86%), Postives = 185/187 (98.93%), Query Frame = 1
Query: 1 AYDSFTFTVNDGTIDSAGGYTLTVDVTPVNDAPTGADNTVTTGENTVYTFTAADFGFGDIDGDALTSVQITSLETVGGLQLIGVDVTLNQIVSKTDLDAGNLTFTPVADTSGAAYDNFGFTVNDGTVNSVATYTMTVDITPDPGNMILDQFGTQSYSNNDGTVNWSSSWVENDSSGGAQIPSNGDVR 561
AYDSFTFTVNDGT+DSAGGYTLTVDVTPVNDAPTGADNTVTTGENTVYTFTAADFGFGDIDGDALTSVQITSLETVGGLQLIGVDVTLNQIVSK DLDAGNLTFTPVADTSGAAYD+FGFTVNDGTVNSVATYTMTVDITPDPGNMILDQFGTQSYSNNDGTVNWSSSWVENDSSGGAQ PSNGDVR
Sbjct: 599 AYDSFTFTVNDGTVDSAGGYTLTVDVTPVNDAPTGADNTVTTGENTVYTFTAADFGFGDIDGDALTSVQITSLETVGGLQLIGVDVTLNQIVSKADLDAGNLTFTPVADTSGAAYDSFGFTVNDGTVNSVATYTMTVDITPDPGNMILDQFGTQSYSNNDGTVNWSSSWVENDSSGGAQSPSNGDVR 785
BLAST of mRNA_M-pyrifera_M_contig115918.3307.1 vs. uniprot
Match: A0A517WGY3_9PLAN (Cadherin domain protein n=5 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517WGY3_9PLAN) HSP 1 Score: 343 bits (881), Expect = 4.040e-106 Identity = 177/187 (94.65%), Postives = 181/187 (96.79%), Query Frame = 1
Query: 1 AYDSFTFTVNDGTIDSAGGYTLTVDVTPVNDAPTGADNTVTTGENTVYTFTAADFGFGDIDGDALTSVQITSLETVGGLQLIGVDVTLNQIVSKTDLDAGNLTFTPVADTSGAAYDNFGFTVNDGTVNSVATYTMTVDITPDPGNMILDQFGTQSYSNNDGTVNWSSSWVENDSSGGAQIPSNGDVR 561
AYD FTFTVNDGT+DSAGGYTLTVDVTPVNDAPTGADNTVTTGENTVYTFTAADFGFGDIDGDALTSVQITSLETVG LQL GVDVTLNQIVSK DLDAGNLTFTPVADTSGAAYD+FGFTVNDGTV+SVATY MTVDITPDPGNMILDQFGTQSYSNNDGTVNWSS+WVENDSSGGAQ PSNGDVR
Sbjct: 1855 AYDGFTFTVNDGTVDSAGGYTLTVDVTPVNDAPTGADNTVTTGENTVYTFTAADFGFGDIDGDALTSVQITSLETVGALQLAGVDVTLNQIVSKADLDAGNLTFTPVADTSGAAYDSFGFTVNDGTVDSVATYMMTVDITPDPGNMILDQFGTQSYSNNDGTVNWSSNWVENDSSGGAQSPSNGDVR 2041
BLAST of mRNA_M-pyrifera_M_contig115918.3307.1 vs. uniprot
Match: A0A518FT96_9PLAN (Cadherin domain protein n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518FT96_9PLAN) HSP 1 Score: 301 bits (772), Expect = 1.830e-91 Identity = 150/187 (80.21%), Postives = 168/187 (89.84%), Query Frame = 1
Query: 1 AYDSFTFTVNDGTIDSAGGYTLTVDVTPVNDAPTGADNTVTTGENTVYTFTAADFGFGDIDGDALTSVQITSLETVGGLQLIGVDVTLNQIVSKTDLDAGNLTFTPVADTSGAAYDNFGFTVNDGTVNSVATYTMTVDITPDPGNMILDQFGTQSYSNNDGTVNWSSSWVENDSSGGAQIPSNGDVR 561
+YDSF F+VNDGT+DS+ YT+TVDVTP NDAPT ADNTV+T ENT YTFTAADFGF DIDGD L S+QITSLE+VG LQL GVDVTLNQI+SK DLDAGNLTFTPVADTSG AYD+FGFTVNDGTV+S+A Y MT+DITPDPGNMILDQF TQ+Y+NNDGTVNWS+ WVENDSSGG+Q P+NGDVR
Sbjct: 1426 SYDSFGFSVNDGTVDSSSAYTMTVDVTPANDAPTAADNTVSTVENTTYTFTAADFGFSDIDGDMLASIQITSLESVGSLQLSGVDVTLNQIISKVDLDAGNLTFTPVADTSGVAYDSFGFTVNDGTVDSIAAYAMTIDITPDPGNMILDQFNTQAYNNNDGTVNWSNDWVENDSSGGSQSPTNGDVR 1612
BLAST of mRNA_M-pyrifera_M_contig115918.3307.1 vs. uniprot
Match: A0A2E7KEZ9_9PLAN (Cadherin domain-containing protein (Fragment) n=1 Tax=Gimesia sp. TaxID=2024833 RepID=A0A2E7KEZ9_9PLAN) HSP 1 Score: 203 bits (516), Expect = 4.590e-57 Identity = 104/140 (74.29%), Postives = 120/140 (85.71%), Query Frame = 1
Query: 4 YDSFTFTVNDGTIDSAGGYTLTVDVTPVNDAPTGADNTVTTGENTVYTFTAADFGFGDIDGDALTSVQITSLETVGGLQLIGVDVTLNQIVSKTDLDAGNLTFTPVADTSGAAYDNFGFTVNDGTVNSVATYTMTVDITP 423
YDSF FTVNDGT+DSA T+TVDVTPVNDAPT ADNTV+T E+T YTFTA DF F DI+GD+L SVQITSLETVG LQL GVDVTLNQ++S+ D+DAGNLTFTPVA+ +GA Y +FGF+VNDGT +SV+ Y MTVDITP
Sbjct: 726 YDSFGFTVNDGTLDSAPFNTMTVDVTPVNDAPTAADNTVSTSEDTAYTFTAVDFNFSDIEGDSLASVQITSLETVGALQLSGVDVTLNQVISRADIDAGNLTFTPVANANGAGYASFGFSVNDGTADSVSWYAMTVDITP 865
BLAST of mRNA_M-pyrifera_M_contig115918.3307.1 vs. uniprot
Match: UPI000E655C2B (DUF4347 domain-containing protein n=1 Tax=Facilibium subflavum TaxID=2219058 RepID=UPI000E655C2B) HSP 1 Score: 187 bits (476), Expect = 1.100e-51 Identity = 92/139 (66.19%), Postives = 117/139 (84.17%), Query Frame = 1
Query: 4 YDSFTFTVNDGTIDSAGGYTLTVDVTPVNDAPTGADNTVTTGENTVYTFTAADFGFGDIDGDALTSVQITSLETVGGLQLIGVDVTLNQIVSKTDLDAGNLTFTPVADTSGAAYDNFGFTVNDGTVNSVATYTMTVDIT 420
YDSF F+VNDGT DS+ YT+TVDVT VNDAPT A+NTVTT E+T YTF+A+DF F D+DGD+L SVQIT+LE+VG LQL G DVTLNQ++SKTD+DAG L FTP D +GA YD+FGF+VNDGT +S +++T+++D+T
Sbjct: 845 YDSFGFSVNDGTADSSSTYTMTVDVTAVNDAPTAANNTVTTSEDTAYTFSASDFNFADVDGDSLASVQITTLESVGSLQLNGSDVTLNQVISKTDIDAGLLVFTPAQDANGAGYDSFGFSVNDGTADSASSHTLSIDVT 983
BLAST of mRNA_M-pyrifera_M_contig115918.3307.1 vs. uniprot
Match: A0A1W9WW19_9GAMM (Uncharacterized protein n=2 Tax=Bacteria TaxID=2 RepID=A0A1W9WW19_9GAMM) HSP 1 Score: 187 bits (474), Expect = 1.730e-51 Identity = 92/139 (66.19%), Postives = 110/139 (79.14%), Query Frame = 1
Query: 4 YDSFTFTVNDGTIDSAGGYTLTVDVTPVNDAPTGADNTVTTGENTVYTFTAADFGFGDIDGDALTSVQITSLETVGGLQLIGVDVTLNQIVSKTDLDAGNLTFTPVADTSGAAYDNFGFTVNDGTVNSVATYTMTVDIT 420
YD+F FTVNDG +DS+ YT+T+DVT VNDAPT ADNTVTT E+T YTF ADFGF D+D D L SV+IT+LETVG LQL G DVTLNQ+++ D+ A NLTF PVAD +G YDNF FTVNDGTV+S + TMT+D+T
Sbjct: 424 YDTFQFTVNDGNVDSSSAYTMTMDVTAVNDAPTAADNTVTTNEDTTYTFAEADFGFSDVDADTLVSVEITTLETVGALQLSGADVTLNQVITVADITASNLTFAPVADANGTGYDNFQFTVNDGTVDSASANTMTIDVT 562
BLAST of mRNA_M-pyrifera_M_contig115918.3307.1 vs. uniprot
Match: A0A3C0AP34_9PLAN (Cadherin domain-containing protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3C0AP34_9PLAN) HSP 1 Score: 183 bits (464), Expect = 4.360e-50 Identity = 92/141 (65.25%), Postives = 109/141 (77.30%), Query Frame = 1
Query: 1 AYDSFTFTVNDGTIDSAGGYTLTVDVTPVNDAPTGADNTVTTGENTVYTFTAADFGFGDIDGDALTSVQITSLETVGGLQLIGVDVTLNQIVSKTDLDAGNLTFTPVADTSGAAYDNFGFTVNDGTVNSVATYTMTVDITP 423
+YDSF+F +NDGT DS+ YT+TVDV P ND PT +DNTV T EN YTF DF F DIDGD+L SV+I+SLETVG LQL GVDVTLNQ+VS+ D+DAGNLTFTPV D +G AYD+F + V DGTV S T TMT+D+ P
Sbjct: 861 SYDSFSFVLNDGTSDSSAAYTMTVDVVPDNDGPTSSDNTVVTSENIPYTFAVIDFNFSDIDGDSLASVRISSLETVGALQLSGVDVTLNQVVSRADIDAGNLTFTPVVDENGTAYDSFAYVVYDGTVESAITNTMTIDVGP 1001
BLAST of mRNA_M-pyrifera_M_contig115918.3307.1 vs. uniprot
Match: A0A2E2CAN5_9PLAN (Uncharacterized protein n=5 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2CAN5_9PLAN) HSP 1 Score: 183 bits (464), Expect = 4.690e-50 Identity = 92/141 (65.25%), Postives = 109/141 (77.30%), Query Frame = 1
Query: 1 AYDSFTFTVNDGTIDSAGGYTLTVDVTPVNDAPTGADNTVTTGENTVYTFTAADFGFGDIDGDALTSVQITSLETVGGLQLIGVDVTLNQIVSKTDLDAGNLTFTPVADTSGAAYDNFGFTVNDGTVNSVATYTMTVDITP 423
+YDSF+F +NDGT DS+ YT+TVDV P ND PT +DNTV T EN YTF DF F DIDGD+L SV+I+SLETVG LQL GVDVTLNQ+VS+ D+DAGNLTFTPV D +G AYD+F + V DGTV S T TMT+D+ P
Sbjct: 869 SYDSFSFVLNDGTSDSSAAYTMTVDVVPDNDGPTSSDNTVVTSENIPYTFAVIDFNFSDIDGDSLASVRISSLETVGALQLSGVDVTLNQVVSRADIDAGNLTFTPVVDENGTAYDSFAYVVYDGTVESAITNTMTIDVGP 1009
BLAST of mRNA_M-pyrifera_M_contig115918.3307.1 vs. uniprot
Match: UPI001CBA72C5 (DUF4347 domain-containing protein n=1 Tax=Marinobacter sp. F4216 TaxID=2874281 RepID=UPI001CBA72C5) HSP 1 Score: 176 bits (445), Expect = 1.650e-47 Identity = 93/139 (66.91%), Postives = 112/139 (80.58%), Query Frame = 1
Query: 7 DSFTFTVNDGTIDSAGGYTLTVD--VTPVNDAPTGADNTVTTGENTVYTFTAADFGFGDIDGDALTSVQITSLETVGGLQLIGVDVTLNQIVSKTDLDAGNLTFTPVADTSGAAYDNFGFTVNDGTVNSVATYTMTVDI 417
D+F F++ DG D A T T + VT VNDAPT A+NT+TT E+TVYTFTAADF F DIDGDAL SVQITSLE+ G LQL GVDVTLNQ+++K D+DAGNLTFTPVAD +G YD+FGF+VNDGT +S ++YTMTVD+
Sbjct: 1122 DAFGFSLADGGEDGAASATDTFNFNVTNVNDAPTAANNTITTNEDTVYTFTAADFKFSDIDGDALASVQITSLESAGSLQLNGVDVTLNQVITKADIDAGNLTFTPVADANGTGYDSFGFSVNDGTADSASSYTMTVDV 1260
BLAST of mRNA_M-pyrifera_M_contig115918.3307.1 vs. uniprot
Match: A0A1W9WV20_9GAMM (Cadherin_4 domain-containing protein n=1 Tax=Beggiatoa sp. 4572_84 TaxID=1972449 RepID=A0A1W9WV20_9GAMM) HSP 1 Score: 172 bits (435), Expect = 6.550e-47 Identity = 88/140 (62.86%), Postives = 107/140 (76.43%), Query Frame = 1
Query: 1 AYDSFTFTVNDGTIDSAGGYTLTVDVTPVNDAPTGADNTVTTGENTVYTFTAADFGFGDIDGDALTSVQITSLETVGGLQLIGVDVTLNQIVSKTDLDAGNLTFTPVADTSGAAYDNFGFTVNDGTVNSVATYTMTVDIT 420
A+D+F FTVNDGT DSA YT+T+DVT VNDAPT DNTVTT E+T Y F ADFGF D+DGD L SV+IT+LETVG LQL G DVT NQ++ ++ NLTFTP A+ +GAA+D F FTVNDGT +S + TMT+D+T
Sbjct: 213 AHDTFQFTVNDGTADSASAYTMTIDVTAVNDAPTATDNTVTTNEDTAYPFVEADFGFSDVDGDTLVSVEITTLETVGALQLSGADVTANQVIPVANIP--NLTFTPAANANGAAHDTFQFTVNDGTADSASANTMTIDVT 350 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115918.3307.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig115918.3307.1 >prot_M-pyrifera_M_contig115918.3307.1 ID=prot_M-pyrifera_M_contig115918.3307.1|Name=mRNA_M-pyrifera_M_contig115918.3307.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=187bp AYDSFTFTVNDGTIDSAGGYTLTVDVTPVNDAPTGADNTVTTGENTVYTFback to top mRNA from alignment at M-pyrifera_M_contig115918:3..563- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig115918.3307.1 ID=mRNA_M-pyrifera_M_contig115918.3307.1|Name=mRNA_M-pyrifera_M_contig115918.3307.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=561bp|location=Sequence derived from alignment at M-pyrifera_M_contig115918:3..563- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig115918:3..563- >mRNA_M-pyrifera_M_contig115918.3307.1 ID=mRNA_M-pyrifera_M_contig115918.3307.1|Name=mRNA_M-pyrifera_M_contig115918.3307.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1122bp|location=Sequence derived from alignment at M-pyrifera_M_contig115918:3..563- (Macrocystis pyrifera P11B4 male)back to top |