mRNA_M-pyrifera_M_contig115799.3272.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig115799.3272.1 vs. uniprot
Match: A0A7S4II64_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4II64_9EUKA) HSP 1 Score: 91.3 bits (225), Expect = 1.090e-20 Identity = 40/78 (51.28%), Postives = 57/78 (73.08%), Query Frame = 1
Query: 13 LDITTGTSYNGEPVELCLALDESNYEDADPDEACLGFIDESEDPPEWKCQDFCLSTNSDGLFCGETDHFTNFAILLDG 246
L++ + G VE+C+ D++ + D+ CLGF+DES++PPEW+C+D C+ S+GLFCGETDHFTNFA+LLDG
Sbjct: 153 LELADESQDIGGTVEICIEADKNQQ---NTDDLCLGFLDESKNPPEWRCEDSCVQEVSNGLFCGETDHFTNFALLLDG 227
BLAST of mRNA_M-pyrifera_M_contig115799.3272.1 vs. uniprot
Match: A0A7S4HI46_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HI46_9EUKA) HSP 1 Score: 84.3 bits (207), Expect = 7.960e-19 Identity = 41/78 (52.56%), Postives = 50/78 (64.10%), Query Frame = 1
Query: 19 ITTGTSYNGEPVELCLALDESNYEDADPDEACLGFIDESEDPPEWKCQDFCLSTNSDGLFCGETDHFTNFAILLDGAG 252
+ +G + G VE+CL E P +ACLGF+DE++DPPEW CQD L DGLFCG +DHFTNFAIL G G
Sbjct: 60 LESGNNQLGGYVEICLLASEGIL----PSDACLGFLDETKDPPEWICQDNNLFVGLDGLFCGTSDHFTNFAILFKGTG 133
BLAST of mRNA_M-pyrifera_M_contig115799.3272.1 vs. uniprot
Match: A0A7S4IHC7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IHC7_9EUKA) HSP 1 Score: 82.0 bits (201), Expect = 1.690e-18 Identity = 41/86 (47.67%), Postives = 54/86 (62.79%), Query Frame = 1
Query: 4 SPVLDITTGTSYN---GEPVELCLALDESNYEDADPDEACLGFIDESEDPPEWKCQDFCLSTNSDGLFCGETDHFTNFAILLDGAG 252
S +++I T +S G VE+CL + D+ CLGF+DE+ +PPEW C+D CL TN +GL CG T HFTNFA+LL G G
Sbjct: 11 SAIVNIETESSAQSQLGGDVEICLRPATT------ADDQCLGFLDENRNPPEWVCEDPCLETNQNGLLCGSTSHFTNFALLLSGTG 90
BLAST of mRNA_M-pyrifera_M_contig115799.3272.1 vs. uniprot
Match: A0A7S4M930_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4M930_9EUKA) HSP 1 Score: 73.2 bits (178), Expect = 4.690e-15 Identity = 29/47 (61.70%), Postives = 35/47 (74.47%), Query Frame = 1
Query: 112 CLGFIDESEDPPEWKCQDFCLSTNSDGLFCGETDHFTNFAILLDGAG 252
CLGF+DE+ PPEW C+D CL +G CG TDHFTNFA+LL G+G
Sbjct: 41 CLGFLDETLQPPEWTCEDQCLEKGENGFACGSTDHFTNFALLLQGSG 87
BLAST of mRNA_M-pyrifera_M_contig115799.3272.1 vs. uniprot
Match: A0A7S4MSZ0_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MSZ0_9EUKA) HSP 1 Score: 65.9 bits (159), Expect = 4.760e-12 Identity = 25/40 (62.50%), Postives = 34/40 (85.00%), Query Frame = 1
Query: 133 SEDPPEWKCQDFCLSTNSDGLFCGETDHFTNFAILLDGAG 252
+++PPEWKC+D CL+ +GL CGE+DHFTNFA+LL G+G
Sbjct: 1 TQEPPEWKCEDSCLTETENGLVCGESDHFTNFALLLGGSG 40
BLAST of mRNA_M-pyrifera_M_contig115799.3272.1 vs. uniprot
Match: A0A7S4I5R2_9EUKA (Hypothetical protein n=2 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4I5R2_9EUKA) HSP 1 Score: 67.0 bits (162), Expect = 4.590e-11 Identity = 36/83 (43.37%), Postives = 53/83 (63.86%), Query Frame = 1
Query: 4 SPVLDITT--GTSYNGEPVELCLALDESNYEDADPDEACLGFIDESEDPPEWKCQDFCLSTNSDGLFCGETDHFTNFAILLDG 246
S ++D+T G+ G VE+C+ E++ + DE CLGF+D ++ W C+D CL + DGL+CG T HFTNFA+LL+G
Sbjct: 518 SLIVDVTLVDGSQNIGGKVEICI---EASDPRTNRDEVCLGFLDTKQN--RWTCEDSCLQ-DRDGLYCGSTRHFTNFALLLEG 594
BLAST of mRNA_M-pyrifera_M_contig115799.3272.1 vs. uniprot
Match: A0A7S4MGF8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MGF8_9EUKA) HSP 1 Score: 64.3 bits (155), Expect = 7.520e-11 Identity = 27/43 (62.79%), Postives = 32/43 (74.42%), Query Frame = 1
Query: 112 CLGFIDESEDPPEWKCQDFCLSTNSDGLFCGETDHFTNFAILL 240
CLGF+DES +PPEW C+ CL D L CG TDHFTNFA+L+
Sbjct: 129 CLGFLDESIEPPEWNCEAVCLKKEGD-LLCGFTDHFTNFALLI 170
BLAST of mRNA_M-pyrifera_M_contig115799.3272.1 vs. uniprot
Match: A0A7S4MLL6_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MLL6_9EUKA) HSP 1 Score: 64.3 bits (155), Expect = 1.740e-10 Identity = 32/74 (43.24%), Postives = 46/74 (62.16%), Query Frame = 1
Query: 31 TSYNGEPVELCLALDESNYEDADPDEACLGFIDESEDPPEWKCQDFCLSTNSDGLFCGETDHFTNFAILLDGAG 252
T ++ P+E+C+ + D + CLGF +E + +W+C+D CLS S L CGETDH T+FA+LLDG G
Sbjct: 123 TDFSDNPIEVCIEKPKGE----DTKDICLGFFNEQTN--QWECEDNCLSEQSSTL-CGETDHLTSFALLLDGTG 189
BLAST of mRNA_M-pyrifera_M_contig115799.3272.1 vs. uniprot
Match: A0A7S4I704_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4I704_9EUKA) HSP 1 Score: 64.3 bits (155), Expect = 4.040e-10 Identity = 27/43 (62.79%), Postives = 32/43 (74.42%), Query Frame = 1
Query: 112 CLGFIDESEDPPEWKCQDFCLSTNSDGLFCGETDHFTNFAILL 240
CLGF+DES +PPEW C+ CL D L CG TDHFTNFA+L+
Sbjct: 514 CLGFLDESIEPPEWNCEAVCLKKEGD-LLCGFTDHFTNFALLI 555
BLAST of mRNA_M-pyrifera_M_contig115799.3272.1 vs. uniprot
Match: A0A7S4MPZ4_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MPZ4_9EUKA) HSP 1 Score: 62.4 bits (150), Expect = 1.980e-9 Identity = 35/86 (40.70%), Postives = 47/86 (54.65%), Query Frame = 1
Query: 4 SPVLDITTGTSYN-----GEPVELCLALDESNYEDADPDEACLGFIDESEDPPEWKCQDFCLSTNSDGLFCGETDHFTNFAILLDG 246
S ++DI + EP+E+CL D D D+ACL F + D W+C+D CL D +CGETDH T+FA+LLDG
Sbjct: 971 SVIIDINLRDEFGEIKQLNEPLEICL-----ENPDEDADDACLSFF--NTDTRRWECEDECLKKVGD-KYCGETDHLTSFALLLDG 1048 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115799.3272.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig115799.3272.1 >prot_M-pyrifera_M_contig115799.3272.1 ID=prot_M-pyrifera_M_contig115799.3272.1|Name=mRNA_M-pyrifera_M_contig115799.3272.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=85bp ASPVLDITTGTSYNGEPVELCLALDESNYEDADPDEACLGFIDESEDPPEback to top mRNA from alignment at M-pyrifera_M_contig115799:156..410+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig115799.3272.1 ID=mRNA_M-pyrifera_M_contig115799.3272.1|Name=mRNA_M-pyrifera_M_contig115799.3272.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=255bp|location=Sequence derived from alignment at M-pyrifera_M_contig115799:156..410+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig115799:156..410+ >mRNA_M-pyrifera_M_contig115799.3272.1 ID=mRNA_M-pyrifera_M_contig115799.3272.1|Name=mRNA_M-pyrifera_M_contig115799.3272.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=510bp|location=Sequence derived from alignment at M-pyrifera_M_contig115799:156..410+ (Macrocystis pyrifera P11B4 male)back to top |