mRNA_M-pyrifera_M_contig11576.3265.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11576.3265.1 vs. uniprot
Match: D7FR58_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR58_ECTSI) HSP 1 Score: 303 bits (777), Expect = 6.700e-101 Identity = 152/191 (79.58%), Postives = 170/191 (89.01%), Query Frame = 1
Query: 1 MNGG-EKLRLVSVCDKETGVCLFQRAWQWRGDQERSS--IGNLVQSFYQFAREVDQGEISCVNFLVQSRTHRRVSSSQAARRSRGPSTRGPSDSMQMLCTRNENIIVAVFFDVKTCVTTSTENQGSVREFLNQASDSFCDTFAGRVISIRPTLKECADGNVNDGVLQSLQDEFAPFKESIDRIRHVCFTPA 564
MNGG EKLRL+SV DKETGVCLFQRAWQWRG+QERSS IG LVQSFYQFAREVDQGEISCVNFLV+SRTHRRVSSSQA RR+RGPS R DSMQMLCTRNE+IIVAVFFDVKTCVTTSTENQGSVR+F+NQ +SFC+TFAGRV S+RPTLK+CADG++ND L+S+QDEF F +D++RHVCFT A
Sbjct: 1 MNGGTEKLRLLSVIDKETGVCLFQRAWQWRGEQERSSVSIGKLVQSFYQFAREVDQGEISCVNFLVKSRTHRRVSSSQATRRTRGPSARSLPDSMQMLCTRNEDIIVAVFFDVKTCVTTSTENQGSVRQFINQVKNSFCETFAGRVASLRPTLKQCADGDMNDAALRSVQDEFLRFGPDVDQMRHVCFTAA 191
BLAST of mRNA_M-pyrifera_M_contig11576.3265.1 vs. uniprot
Match: A0A6H5JLG3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLG3_9PHAE) HSP 1 Score: 149 bits (377), Expect = 8.680e-42 Identity = 73/99 (73.74%), Postives = 86/99 (86.87%), Query Frame = 1
Query: 274 MQMLCTRNENIIVAVFFDVKTCVTTSTENQGSVREFLNQAS--DSFCDTFAGRVISIRPTLKECADGNVNDGVLQSLQDEFAPFKESIDRIRHVCFTPA 564
MQMLCTRNE+IIVAVFFDVKTCVTTSTENQGSVR+FLNQAS +SFC+TFA RV S+RP LK+CADG++ND L+S+QDEF F +D++RHVCFT A
Sbjct: 1 MQMLCTRNEDIIVAVFFDVKTCVTTSTENQGSVRQFLNQASVKNSFCETFAERVASLRPILKQCADGDMNDAALRSVQDEFLRFGPDVDQMRHVCFTAA 99
BLAST of mRNA_M-pyrifera_M_contig11576.3265.1 vs. uniprot
Match: A0A7S3H3M2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H3M2_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 8.710e-16 Identity = 53/180 (29.44%), Postives = 90/180 (50.00%), Query Frame = 1
Query: 28 VSVCDKETGVCLFQRAWQWRGDQERSSIGNLVQSFYQFAREVDQGEISCVNFLVQSRTHRRVSSSQAARRSRGPSTRGPSDSMQMLCTRNENIIVAVFFDVKTCVTTSTENQGSVREFLNQASDSFCDTFAGRVISIRPTLKECADGNVNDGVLQSLQDE----FAPFKESIDRIRHVCF 555
+ + D ETG+ +FQ+ ++W+ ++G L+Q FYQFAREVD G+ISCVNF + + R++ Q R++ +MQM + ++IIV+VFFD++ + E + ++ F R+ RPTL++ D ++ L F F + D++ H F
Sbjct: 19 ICISDVETGIIVFQKVYKWKESSAFFNLGGLIQVFYQFAREVDDGQISCVNFELGRKVTTRLNQDQLQSRNQ---------TMQMKSVKTDDIIVSVFFDMQGMDMPTAEEDLKLDVLMHAVEFVFTQDCLDRLKMKRPTLQQ--DMEEQHEAMEELDGRVTLPFEDFSFTADQLHHQLF 187
BLAST of mRNA_M-pyrifera_M_contig11576.3265.1 vs. uniprot
Match: A0A7S2JM28_9EUKA (Hypothetical protein n=1 Tax=Cyanoptyche gloeocystis TaxID=77922 RepID=A0A7S2JM28_9EUKA) HSP 1 Score: 81.6 bits (200), Expect = 1.060e-14 Identity = 54/176 (30.68%), Postives = 89/176 (50.57%), Query Frame = 1
Query: 28 VSVCDKETGVCLFQRAWQWRGDQERSSIGNLVQSFYQFAREVDQGEISCVNFLVQSRTHRRVSSSQAARRSRGPSTRGPSDSMQ---MLCTRNENIIVAVFFDVKTCVTTSTENQGSVREFLNQASDSFCDTFAGRVISIRPTLKECADGNVNDGV--LQSLQDEFAPFKESIDRI 540
V++ D GV LF+R W+W+ + +I +LVQ FYQFAR+VD GEIS V+F R S + RR G S G S+ +Q M+C ++ + VAVF D E S + ++F + +V S++ LK+ + + + ++ + ++FA F ++R
Sbjct: 5 VNISDTTCGVVLFERVWKWQEEGRSKNIASLVQVFYQFARDVDAGEISRVSFSKPDSLFR---SQNSGRRKVGSSNSGISNELQSIDMVCAKDSRVTVAVFQD---------ELNASSKAVAQALLEAFVQQYGEQVDSMKNVLKKASQASSKNESREMRHILEKFAGFSSVVERF 168
BLAST of mRNA_M-pyrifera_M_contig11576.3265.1 vs. uniprot
Match: A0A8K1FAT8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FAT8_PYTOL) HSP 1 Score: 76.6 bits (187), Expect = 1.070e-12 Identity = 54/181 (29.83%), Postives = 81/181 (44.75%), Query Frame = 1
Query: 19 LRLVSVCDKETGVCLFQRAWQWRGDQERSSIGNLVQSFYQFAREVDQGEISCVNFLVQSRTHRRVSSSQAARRSRGPSTRGP-------SDSMQMLCTRNENIIVAVFFDVKTCVTTSTENQGSVREFLNQASDSFCDTFAGRVISIRPTLKECADGNVNDGVLQSLQDEFAPFKESIDRI 540
LR++ V ++ +G+CLF + WQW + + LVQSF QFARE+D G+I V+F ++ S + +G S G S +++ML EN+ V +F D S E +R FLNQ F D + V + R + L D APF+ D +
Sbjct: 45 LRMLKVLERASGICLFTKQWQWHPQGQPEGVDALVQSFTQFAREIDGGDIVRVHFDTRTAQGSSTSIGSISATPKGQSLSGEEERRPAQSTAIEMLSHETENLHVVLFHD-----RFSDETTVQMRVFLNQIVQCFVDQYGNDVANFRANTPSSSTPT------DQLTDLLAPFRSFEDVV 214
BLAST of mRNA_M-pyrifera_M_contig11576.3265.1 vs. uniprot
Match: A0A8J2S945_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S945_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 1.220e-12 Identity = 43/103 (41.75%), Postives = 59/103 (57.28%), Query Frame = 1
Query: 19 LRLVSVCDKETGVCLFQRAWQWRGDQERSSIGNLVQSFYQFAREVDQGEISCVNFLVQSRTHRRVSSSQAARRSRGPSTRGPSDSMQMLCTRNENIIVAVFFD 327
LRL+SVCD E+G LF+R W+W + IGNLV+SF+ AR++D G IS V F V + G ++M+MLCTRNE ++VAVF +
Sbjct: 144 LRLLSVCDSESGEGLFERVWRWPEGADPKGIGNLVRSFFLVARQLDHGMISRVVFEAPEDEAALVPHA------------GIGEAMEMLCTRNERVVVAVFHE 234
BLAST of mRNA_M-pyrifera_M_contig11576.3265.1 vs. uniprot
Match: A0A7S2RT87_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RT87_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 8.380e-11 Identity = 52/200 (26.00%), Postives = 94/200 (47.00%), Query Frame = 1
Query: 13 EKLRLVSVCDKETGVCLFQRAWQWRGDQERSSIGNLVQSFYQFAREVDQGEISCVNFLVQSRTHRRVSSSQAARRSRGPSTRGPSDSMQMLCTRNENIIVAVFFDVKTCVTT--STENQG-----SVREFLNQASDSFCDTFAGRVISIRPTLKECADGNVNDGVLQSLQDEFAPFKESIDRIRHVCFTPA*TTVEATQQ 591
E L+L+ + + +G LF + W+W D + + NLV++F +F++E+D G ISCVNF V ++ + RS + + MQM+C R ++ A+FF + ++ STE+ G +R L+ + F + F+ ++ ++ G+ D + PF + +D I T T EA +
Sbjct: 28 EALKLLYIFEPTSGRLLFSKKWRWPTDHD--GVLNLVKNFLKFSQEIDDGNISCVNFEVPAQP-------DGSGRSMRSAAGSQQECMQMICRRESKLVAALFFQIPLNISLGLSTESHGPDLSQQMRVLLSDVCEEFHNLFSAKLDVLQ--AGSAGSGSDGDPADPKALTDTQPFFDVLDYIVERRATAKPTEAEAEHE 216
BLAST of mRNA_M-pyrifera_M_contig11576.3265.1 vs. uniprot
Match: K3WGT5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGT5_GLOUD) HSP 1 Score: 63.2 bits (152), Expect = 3.530e-8 Identity = 46/176 (26.14%), Postives = 85/176 (48.30%), Query Frame = 1
Query: 13 EKLRLVSVCDKETGVCLFQRAWQWRGDQERSSIGNLVQSFYQFAREVDQGEISCVNFL-VQSRTHRRVSSSQAARRSRGPST-RGPSDSMQMLCTRNENIIVAVFFDVKTCVTTSTENQGSVREFLNQASDSFCDTFAGRVISIRPTLKECADGNVNDGVLQSLQDEFAPFKESID 534
++LR++ + D+ +G+CLF W+W + LVQSF QFARE+D GE+ V+F + +++ + R S GP + ++ M+ T+ ++ AV F +T + + + FL + F + ++ ++RP L+ A ++ EF FK +D
Sbjct: 14 KELRMLKILDRRSGICLFTEQWKWHPHAHAEGVDALVQSFTQFAREIDGGEVMQVHFNPTMGKNDPKIADDR--RPSSGPMQFTNTTGAITMISTQTA-VVQAVLFHDRTA---AEPVAAAFKVFLQKLVARFDQVYRDQLANLRPQLEPNATLTTEQHT--AILGEFVDFKIELD 181
BLAST of mRNA_M-pyrifera_M_contig11576.3265.1 vs. uniprot
Match: A0A5D6Y142_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y142_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 5.800e-7 Identity = 49/182 (26.92%), Postives = 85/182 (46.70%), Query Frame = 1
Query: 1 MNGGEKLRLVSVCDKETGVCLFQRAWQWRGDQERSSIGNLVQSFYQFAREVDQGEISCVNFLVQSRTHRRVSSSQAARRSRGP----STRGPSDSMQMLCTRNENIIVAVFFDVKTCVTTSTENQGSVREFLNQASDSFCDTFAGRVISIRPTLKECADGNVNDGVLQSLQDEFAPFKESID 534
++G +LR++ + ++++ C+F W+W + LVQSF QFARE+D GE+ +F + + R S GP ST G ++ M+ TRN+ + +F D T S + + FL + F F + S+R L+ A ++D ++ F+ FK +D
Sbjct: 59 ISGVPELRMLKLFERQSSCCVFTEQWKWHPHAHAEGVDALVQSFTQFAREIDGGEVVQAHFSPAGGKND-PKFADDRRPSSGPMQFMSTAG---AITMVSTRNDEVQAVLFHDR----TISEPLAAAFKAFLQRVLQVFGQRFDSELASLRGELQPNAV--LSDDQQSAVLHLFSGFKADLD 230
BLAST of mRNA_M-pyrifera_M_contig11576.3265.1 vs. uniprot
Match: F0WHA1_9STRA (Uncharacterized protein AlNc14C99G5967 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WHA1_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 2.270e-6 Identity = 21/57 (36.84%), Postives = 37/57 (64.91%), Query Frame = 1
Query: 13 EKLRLVSVCDKETGVCLFQRAWQWRGDQERSSIGNLVQSFYQFAREVDQGEISCVNF 183
++LR++ V +++G CLF W+W D + +L+QSF QF+RE+D G++ + F
Sbjct: 5 DELRILKVFSRQSGDCLFSHRWKWHADAHEEGLNSLIQSFLQFSREIDGGDLMELRF 61 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11576.3265.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11576.3265.1 >prot_M-pyrifera_M_contig11576.3265.1 ID=prot_M-pyrifera_M_contig11576.3265.1|Name=mRNA_M-pyrifera_M_contig11576.3265.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=189bp MNGGEKLRLVSVCDKETGVCLFQRAWQWRGDQERSSIGNLVQSFYQFAREback to top mRNA from alignment at M-pyrifera_M_contig11576:4274..8418- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11576.3265.1 ID=mRNA_M-pyrifera_M_contig11576.3265.1|Name=mRNA_M-pyrifera_M_contig11576.3265.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4145bp|location=Sequence derived from alignment at M-pyrifera_M_contig11576:4274..8418- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11576:4274..8418- >mRNA_M-pyrifera_M_contig11576.3265.1 ID=mRNA_M-pyrifera_M_contig11576.3265.1|Name=mRNA_M-pyrifera_M_contig11576.3265.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1134bp|location=Sequence derived from alignment at M-pyrifera_M_contig11576:4274..8418- (Macrocystis pyrifera P11B4 male)back to top |