mRNA_M-pyrifera_M_contig115696.3254.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig115696.3254.1 vs. uniprot
Match: A0A7V3DFX6_9BACT (ABC transporter ATP-binding protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7V3DFX6_9BACT) HSP 1 Score: 216 bits (551), Expect = 3.380e-69 Identity = 105/138 (76.09%), Postives = 120/138 (86.96%), Query Frame = 1
Query: 1 GFVFQTFNLLTPFTALQNVLLGMRFSETLPSREWKDRGTELLERVGLGHRLHSKPTTLSVGEQQRVAIARALANKQEIVVADEPTGSLDPRTSDEVMNLLIEMCGEENVTLLLVTHEDELASRLQRRFECRGLVTEVA 414
GFVFQTFNLL PFTALQNV+LGMRFS+T+P EWK R T+LLERVGLGHRLHSKP T+SVGE+QRVAIARALAN+Q IV ADEPTGSLDP+T+D VM+LL+EMC EENVTLLLVTH E+A R +F+C GLV EV+
Sbjct: 82 GFVFQTFNLLAPFTALQNVMLGMRFSDTIPQAEWKSRATQLLERVGLGHRLHSKPATMSVGERQRVAIARALANRQTIVAADEPTGSLDPKTADSVMDLLLEMCREENVTLLLVTHAQEIARRCAEQFDCTGLVKEVS 219
BLAST of mRNA_M-pyrifera_M_contig115696.3254.1 vs. uniprot
Match: A0A7Z9LQ67_9BACT (ABC transporter ATP-binding protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Z9LQ67_9BACT) HSP 1 Score: 207 bits (526), Expect = 2.130e-65 Identity = 102/138 (73.91%), Postives = 118/138 (85.51%), Query Frame = 1
Query: 1 GFVFQTFNLLTPFTALQNVLLGMRFSETLPSREWKDRGTELLERVGLGHRLHSKPTTLSVGEQQRVAIARALANKQEIVVADEPTGSLDPRTSDEVMNLLIEMCGEENVTLLLVTHEDELASRLQRRFECRGLVTEVA 414
GFVFQTFNLL PFTALQNVLLGM+FS+T P +EWK R T LLERVGLGHRL+SKPTT+SVGEQQRVAIARALANKQ++VVADEPTGSLDP+T+ VM LL+EMC EE VT+L+VTH+ +A L RF+C LV EV+
Sbjct: 82 GFVFQTFNLLKPFTALQNVLLGMQFSDTRPPKEWKPRATALLERVGLGHRLNSKPTTMSVGEQQRVAIARALANKQQVVVADEPTGSLDPKTAASVMELLLEMCREEEVTMLMVTHDKTIADSLPERFDCTELVREVS 219
BLAST of mRNA_M-pyrifera_M_contig115696.3254.1 vs. uniprot
Match: A0A2A5E3T6_9BACT (ABC transporter ATP-binding protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A2A5E3T6_9BACT) HSP 1 Score: 203 bits (517), Expect = 4.950e-64 Identity = 98/138 (71.01%), Postives = 118/138 (85.51%), Query Frame = 1
Query: 1 GFVFQTFNLLTPFTALQNVLLGMRFSETLPSREWKDRGTELLERVGLGHRLHSKPTTLSVGEQQRVAIARALANKQEIVVADEPTGSLDPRTSDEVMNLLIEMCGEENVTLLLVTHEDELASRLQRRFECRGLVTEVA 414
GF+FQTFNLL PFTALQNV+LGM+FS+T P +EWK R ELL+RVGL HR+HSKPTT+SVGEQQRVAIARALANKQ+IVVADEPTGSLDP+T+ VM+LL+EMC EE VT+L+VTH+ +A L+ F+C LV EV+
Sbjct: 82 GFIFQTFNLLKPFTALQNVMLGMQFSDTRPQKEWKPRSIELLDRVGLSHRIHSKPTTMSVGEQQRVAIARALANKQKIVVADEPTGSLDPKTAASVMDLLLEMCREEAVTMLMVTHDKSIADSLETHFDCSELVQEVS 219
BLAST of mRNA_M-pyrifera_M_contig115696.3254.1 vs. uniprot
Match: A0A1V6F1S2_9BACT (Lipoprotein-releasing system ATP-binding protein LolD n=1 Tax=Candidatus Hydrogenedentes bacterium ADurb.Bin101 TaxID=1852847 RepID=A0A1V6F1S2_9BACT) HSP 1 Score: 194 bits (494), Expect = 1.540e-60 Identity = 94/138 (68.12%), Postives = 112/138 (81.16%), Query Frame = 1
Query: 1 GFVFQTFNLLTPFTALQNVLLGMRFSETLPSREWKDRGTELLERVGLGHRLHSKPTTLSVGEQQRVAIARALANKQEIVVADEPTGSLDPRTSDEVMNLLIEMCGEENVTLLLVTHEDELASRLQRRFECRGLVTEVA 414
GFVFQTFNLL PFT LQNV+LGMRF++ +P +EWK R +LERVGL HRL SKP TLSVGE+QRVAIARALAN +++VADEPTGSLDP+T+D VM LL+E+C +E VTLLLVTH+ +A RL F+C GLV E A
Sbjct: 82 GFVFQTFNLLAPFTVLQNVILGMRFADVIPEKEWKPRSLAMLERVGLAHRLKSKPGTLSVGERQRVAIARALANNPKLIVADEPTGSLDPKTADAVMTLLLELCEQEQVTLLLVTHDKGIADRLPETFDCSGLVEEAA 219
BLAST of mRNA_M-pyrifera_M_contig115696.3254.1 vs. uniprot
Match: A0A7C1GYH9_9BACT (ABC transporter ATP-binding protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C1GYH9_9BACT) HSP 1 Score: 194 bits (493), Expect = 2.180e-60 Identity = 92/137 (67.15%), Postives = 114/137 (83.21%), Query Frame = 1
Query: 1 GFVFQTFNLLTPFTALQNVLLGMRFSETLPSREWKDRGTELLERVGLGHRLHSKPTTLSVGEQQRVAIARALANKQEIVVADEPTGSLDPRTSDEVMNLLIEMCGEENVTLLLVTHEDELASRLQRRFECRGLVTEV 411
GFVFQTFNLL PFTALQNV++GMRF++ +P +EWK+R +L+RVGLGHRLHSKP TLSVGE+QRVAIARAL N+ ++VADEPTGSLDP+T+D VM LL+E+C +E VTLLLVTH+ +A RL + F+C LV E
Sbjct: 82 GFVFQTFNLLAPFTALQNVIVGMRFADVIPDKEWKERARAMLDRVGLGHRLHSKPGTLSVGERQRVAIARALVNQPRLIVADEPTGSLDPKTADGVMALLLELCEQEKVTLLLVTHDRSIADRLPKIFDCTDLVKEA 218
BLAST of mRNA_M-pyrifera_M_contig115696.3254.1 vs. uniprot
Match: A0A847G7Q9_9BACT (ABC transporter ATP-binding protein n=1 Tax=Candidatus Hydrogenedens sp. TaxID=2654184 RepID=A0A847G7Q9_9BACT) HSP 1 Score: 192 bits (489), Expect = 8.830e-60 Identity = 93/138 (67.39%), Postives = 113/138 (81.88%), Query Frame = 1
Query: 1 GFVFQTFNLLTPFTALQNVLLGMRFSETLPSREWKDRGTELLERVGLGHRLHSKPTTLSVGEQQRVAIARALANKQEIVVADEPTGSLDPRTSDEVMNLLIEMCGEENVTLLLVTHEDELASRLQRRFECRGLVTEVA 414
GF+FQTFNLL PFTA QNV+LGMRF++ +P +EW R T +LERV LGHR+HSKP TLSVGE+QRVAIARAL N+ +++VADEPTGSLDP+T++ VM LL+E+C EE VTLLLVTH+ A RL F+C GLV EVA
Sbjct: 82 GFIFQTFNLLGPFTARQNVMLGMRFADVVPEKEWGARATAMLERVRLGHRMHSKPATLSVGERQRVAIARALVNRPKLIVADEPTGSLDPKTAESVMALLLELCAEEGVTLLLVTHDRATAERLPSVFDCSGLVREVA 219
BLAST of mRNA_M-pyrifera_M_contig115696.3254.1 vs. uniprot
Match: A0A1V5YVJ2_9BACT (Lipoprotein-releasing system ATP-binding protein LolD n=1 Tax=Candidatus Hydrogenedentes bacterium ADurb.Bin170 TaxID=1852848 RepID=A0A1V5YVJ2_9BACT) HSP 1 Score: 187 bits (476), Expect = 8.290e-58 Identity = 94/138 (68.12%), Postives = 109/138 (78.99%), Query Frame = 1
Query: 1 GFVFQTFNLLTPFTALQNVLLGMRFSETLPSREWKDRGTELLERVGLGHRLHSKPTTLSVGEQQRVAIARALANKQEIVVADEPTGSLDPRTSDEVMNLLIEMCGEENVTLLLVTHEDELASRLQRRFECRGLVTEVA 414
GFVFQTFNLL PF ALQNVLLGMRFS+T+P +EWK R +L RVGL RLHSKP TLSVGE+QRVAIARAL NK ++VADEPTGSLDP+T+ VM LL+E+C EE VTLLLVTH+ +A +L F+C GL E A
Sbjct: 82 GFVFQTFNLLPPFNALQNVLLGMRFSDTIPEQEWKSRAVAMLNRVGLERRLHSKPGTLSVGERQRVAIARALVNKPRLIVADEPTGSLDPKTAASVMALLLELCEEEKVTLLLVTHDRGIAEQLPDLFDCTGLAREDA 219
BLAST of mRNA_M-pyrifera_M_contig115696.3254.1 vs. uniprot
Match: A0A7C4V0K8_9BACT (ABC transporter ATP-binding protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C4V0K8_9BACT) HSP 1 Score: 175 bits (443), Expect = 8.120e-53 Identity = 86/136 (63.24%), Postives = 108/136 (79.41%), Query Frame = 1
Query: 1 GFVFQTFNLLTPFTALQNVLLGMRFSETLPSREWKDRGTELLERVGLGHRLHSKPTTLSVGEQQRVAIARALANKQEIVVADEPTGSLDPRTSDEVMNLLIEMCGEENVTLLLVTHEDELASRLQRRFECRGLVTE 408
GF+FQTFNLL PF+ALQNV++GMRFS T+PS W LLERVGLG++L +KP+ LSVGEQQRVAIARA+ANKQ+I+VADEPTGSLDP+T+++V+ LL+E+ E VTLLLVTH+ +A R + C LV E
Sbjct: 82 GFIFQTFNLLPPFSALQNVVIGMRFSSTVPSSIWNKTAKSLLERVGLGNKLSNKPSQLSVGEQQRVAIARAVANKQKIIVADEPTGSLDPKTANKVLELLLELSDEHGVTLLLVTHDKSIADRFPIIYNCSNLVKE 217
BLAST of mRNA_M-pyrifera_M_contig115696.3254.1 vs. uniprot
Match: A0A7Y5CBA9_9BACT (ATP-binding cassette domain-containing protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Y5CBA9_9BACT) HSP 1 Score: 161 bits (407), Expect = 1.310e-47 Identity = 83/138 (60.14%), Postives = 99/138 (71.74%), Query Frame = 1
Query: 1 GFVFQTFNLLTPFTALQNVLLGMRFSETLPSREWKDRGTELLERVGLGHRLHSKPTTLSVGEQQRVAIARALANKQEIVVADEPTGSLDPRTSDEVMNLLIEMCGEENVTLLLVTHEDELASRLQRRFECRGLVTEVA 414
GFVFQTFNLL PFTALQNV+LGMRFS+T P+REW++ T LLERVGLGHRLH++P T+SVGE+QRVAIARALA VM+LL+E+CGE VTLLLVTH+ ++A L RF+C GL E A
Sbjct: 82 GFVFQTFNLLGPFTALQNVMLGMRFSDTRPAREWREHATHLLERVGLGHRLHARPGTMSVGERQRVAIARALAAG--------------------VMDLLLELCGENKVTLLLVTHDQKIAEHLPNRFDCTGLARETA 199
BLAST of mRNA_M-pyrifera_M_contig115696.3254.1 vs. uniprot
Match: A0A351FFI6_9BACT (ABC transporter n=2 Tax=Opitutae bacterium TaxID=2026771 RepID=A0A351FFI6_9BACT) HSP 1 Score: 154 bits (389), Expect = 1.820e-44 Identity = 78/138 (56.52%), Postives = 103/138 (74.64%), Query Frame = 1
Query: 1 GFVFQTFNLLTPFTALQNVLLGMRFSETLPSREWKDRGTELLERVGLGHRLHSKPTTLSVGEQQRVAIARALANKQEIVVADEPTGSLDPRTSDEVMNLLIEMCGEENVTLLLVTHEDELASRLQRRFECRGLVTEVA 414
G VFQTF+LL PFTAL+NV++G+RF S+ K++ TE+L+RVGLG R+H++P LSVGE+QRVAIARAL I++ADEPTGSLDP T EV +LL E+ E+ TL+LVTH+ LA+R+ R F+C GLV +
Sbjct: 87 GMVFQTFHLLAPFTALENVVIGLRFGARTRSK-LKEKATEVLDRVGLGDRIHARPHRLSVGERQRVAIARALVGDASILLADEPTGSLDPETGQEVFHLLREVAEEDRRTLILVTHDPALATRMPRHFDCSGLVRSAS 223 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115696.3254.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig115696.3254.1 >prot_M-pyrifera_M_contig115696.3254.1 ID=prot_M-pyrifera_M_contig115696.3254.1|Name=mRNA_M-pyrifera_M_contig115696.3254.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=140bp GFVFQTFNLLTPFTALQNVLLGMRFSETLPSREWKDRGTELLERVGLGHRback to top mRNA from alignment at M-pyrifera_M_contig115696:3..422+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig115696.3254.1 ID=mRNA_M-pyrifera_M_contig115696.3254.1|Name=mRNA_M-pyrifera_M_contig115696.3254.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=420bp|location=Sequence derived from alignment at M-pyrifera_M_contig115696:3..422+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig115696:3..422+ >mRNA_M-pyrifera_M_contig115696.3254.1 ID=mRNA_M-pyrifera_M_contig115696.3254.1|Name=mRNA_M-pyrifera_M_contig115696.3254.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=840bp|location=Sequence derived from alignment at M-pyrifera_M_contig115696:3..422+ (Macrocystis pyrifera P11B4 male)back to top |