mRNA_M-pyrifera_M_contig115676.3249.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig115676.3249.1
Unique NamemRNA_M-pyrifera_M_contig115676.3249.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig115676.3249.1 vs. uniprot
Match: A0A5A8DDZ8_CAFRO (MPN domain-containing protein n=3 Tax=Sar TaxID=2698737 RepID=A0A5A8DDZ8_CAFRO)

HSP 1 Score: 139 bits (350), Expect = 1.290e-37
Identity = 76/149 (51.01%), Postives = 99/149 (66.44%), Query Frame = 1 
Query:    1 MIKPQVAMMGQPPRQTTSVLGHLRKPSVKALMHGLNKHYYNMPLSFSHDELEDRMLSHLGRPEWSAGLEMGRMEEAEEAARKSLKRMVPLLKAYASEVTIKEEDMTEDDLAVAKAGKVDAKRDLSTIVNDLVATGITNAMGLMLSTVAF 447
            +I  QV  +  P RQTTSV+GHL+KP+++  MHGL K YY+MP+SF  +ELE++ML +  R EW  GL MG  E+A+  A K +K M+PLL AYA EV + E   TE+  AV +AGKVDA+RDL    + L+   I   MG MLSTV F
Sbjct:  161 LIPKQVMALDLPMRQTTSVVGHLKKPTIRQRMHGLGKMYYSMPVSFRKNELEEKMLRNFDRLEWVRGLRMGSFEDADTLATKRIKAMLPLLDAYAEEVKVDEAAETEEQAAVRRAGKVDARRDLLATSHSLMGDTIARCMGTMLSTVVF 309
[Close]
BLAST of mRNA_M-pyrifera_M_contig115676.3249.1 vs. uniprot
Match: A0A7S2WCS9_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WCS9_9STRA)

HSP 1 Score: 131 bits (330), Expect = 8.180e-35
Identity = 73/149 (48.99%), Postives = 101/149 (67.79%), Query Frame = 1 
Query:    1 MIKPQVAMMGQPPRQTTSVLGHLRKPSVKALMHGLNKHYYNMPLSFSHDELEDRMLSHLGRPEWSAGLEMGRMEEAEEAARKSLKRMVPLLKAYASEVTIKEEDMTEDDLAVAKAGKVDAKRDLSTIVNDLVATGITNAMGLMLSTVAF 447
            +I PQ  M+GQ PRQTTS +GHL+KPS++AL+HGLN+HYY+M L +  +ELE++ML +L +  W+ GL   R E+ + +  K+LK MV L K Y + V  +EE  T ++LAVA  GK+D KR L   V DL+A  I  ++G ML TV F
Sbjct:  144 LINPQSMMLGQEPRQTTSNVGHLKKPSIQALIHGLNRHYYSMVLDYRKNELEEQMLMNLHKKAWTDGLTTLRFEDHQTSNEKTLKSMVQLSKDYNTRVQ-EEEGKTAEELAVANVGKIDPKRHLENSVADLMAANIIQSLGTMLCTVVF 291
[Close]
BLAST of mRNA_M-pyrifera_M_contig115676.3249.1 vs. uniprot
Match: A0A6H5KJB1_9PHAE (MPN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJB1_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 6.770e-34
Identity = 70/149 (46.98%), Postives = 102/149 (68.46%), Query Frame = 1 
Query:    1 MIKPQVAMMGQPPRQTTSVLGHLRKPSVKALMHGLNKHYYNMPLSFSHDELEDRMLSHLGRPEWSAGLEMGRMEEAEEAARKSLKRMVPLLKAYASEVTIKEEDMTEDDLAVAKAGKVDAKRDLSTIVNDLVATGITNAMGLMLSTVAF 447
            +I PQ+ M+GQ PRQTTS +GHL KPSV+AL+HGL +HYY++ + +  +ELE++ML +L R +W+ GL M R E+ + +  K+++ M+ L K Y   V  +EE  T D+LAV   GKVD KR L   V++L+A  I  ++G+ML TV F
Sbjct:  162 LINPQLMMLGQEPRQTTSNVGHLNKPSVQALIHGLQRHYYSIVIDYRKNELEEQMLMNLNREQWTQGLVMKRFEDHQTSNEKTVEAMLKLSKEYNERVQ-EEEGKTIDELAVLNVGKVDPKRHLENDVSELMAANIVQSLGVMLDTVIF 309
[Close]
BLAST of mRNA_M-pyrifera_M_contig115676.3249.1 vs. uniprot
Match: A0A835ZIK0_9STRA (26S proteasome regulatory subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIK0_9STRA)

HSP 1 Score: 126 bits (316), Expect = 1.460e-32
Identity = 69/149 (46.31%), Postives = 101/149 (67.79%), Query Frame = 1 
Query:    1 MIKPQVAMMGQPPRQTTSVLGHLRKPSVKALMHGLNKHYYNMPLSFSHDELEDRMLSHLGRPEWSAGLEMGRMEEAEEAARKSLKRMVPLLKAYASEVTIKEEDMTEDDLAVAKAGKVDAKRDLSTIVNDLVATGITNAMGLMLSTVAF 447
            +I PQ  M+GQ PRQTTS +GHL KPS++AL+HGLN+HYY++ + +  +ELE++ML +L R +W+ GL + R E+ + A  K+++ M+ L K Y   V  +EE  T ++LA+   GKVD KR L   V DL+A+ I  ++G ML TV F
Sbjct:  162 LINPQSMMLGQEPRQTTSNVGHLNKPSIQALIHGLNRHYYSIVIDYRKNELEEQMLMNLHRKQWTDGLVLKRFEDHQTANEKTIEDMLRLSKEYNVRVE-EEEGKTPEELAIMHVGKVDPKRHLEQHVLDLMASNIVQSLGAMLDTVVF 309
[Close]
BLAST of mRNA_M-pyrifera_M_contig115676.3249.1 vs. uniprot
Match: A0A5B8MY97_9CHLO (Regulatory subunit of 26S proteasome n=2 Tax=Chloropicon TaxID=2302914 RepID=A0A5B8MY97_9CHLO)

HSP 1 Score: 126 bits (316), Expect = 1.530e-32
Identity = 68/149 (45.64%), Postives = 99/149 (66.44%), Query Frame = 1 
Query:    1 MIKPQVAMMGQPPRQTTSVLGHLRKPSVKALMHGLNKHYYNMPLSFSHDELEDRMLSHLGRPEWSAGLEMGRMEEAEEAARKSLKRMVPLLKAYASEVTIKEEDMTEDDLAVAKAGKVDAKRDLSTIVNDLVATGITNAMGLMLSTVAF 447
            +I PQ  M+GQ PRQTTS LGHL KPS++AL+HGLN+HYY++ +++  +ELE++ML +L R +WS GL +   E   +A   +LK+M  L K+Y   +  +E+D   +  AVA  GK DAK+ L   +N+L++  I   +G ML TVAF
Sbjct:  164 LISPQTLMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLNRKKWSDGLCLKTFESHSKANETTLKKMADLAKSYVKSIE-EEQDTPIEKRAVANVGKQDAKKHLEYSLNELMSDNIIQCLGTMLDTVAF 311
[Close]
BLAST of mRNA_M-pyrifera_M_contig115676.3249.1 vs. uniprot
Match: A0A7S2C4F7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C4F7_9STRA)

HSP 1 Score: 125 bits (314), Expect = 4.980e-32
Identity = 69/149 (46.31%), Postives = 99/149 (66.44%), Query Frame = 1 
Query:    1 MIKPQVAMMGQPPRQTTSVLGHLRKPSVKALMHGLNKHYYNMPLSFSHDELEDRMLSHLGRPEWSAGLEMGRMEEAEEAARKSLKRMVPLLKAYASEVTIKEEDMTEDDLAVAKAGKVDAKRDLSTIVNDLVATGITNAMGLMLSTVAF 447
            +I PQ  MMGQ PRQTTS +GHL+KPS++AL+HGLN+HYY+M L +  +ELE +ML++L +  W+ GL+  + EE       +LK MV L K Y   V  +E+  T ++L ++  GKVD KR L   V+DL++  I  ++G ML+TV F
Sbjct:  189 LINPQSMMMGQEPRQTTSNVGHLKKPSIQALIHGLNRHYYSMVLDYRKNELEMQMLTNLHKKAWTEGLKTQKFEEQSNDNETTLKTMVNLSKDYNERVQ-EEDTKTAEELMISNVGKVDPKRHLEQHVSDLMSANIVQSLGTMLNTVVF 336
[Close]
BLAST of mRNA_M-pyrifera_M_contig115676.3249.1 vs. uniprot
Match: A0A2K3E5K0_CHLRE (MPN domain-containing protein n=7 Tax=Chlamydomonadales TaxID=3042 RepID=A0A2K3E5K0_CHLRE)

HSP 1 Score: 124 bits (312), Expect = 5.860e-32
Identity = 65/149 (43.62%), Postives = 102/149 (68.46%), Query Frame = 1 
Query:    1 MIKPQVAMMGQPPRQTTSVLGHLRKPSVKALMHGLNKHYYNMPLSFSHDELEDRMLSHLGRPEWSAGLEMGRMEEAEEAARKSLKRMVPLLKAYASEVTIKEEDMTEDDLAVAKAGKVDAKRDLSTIVNDLVATGITNAMGLMLSTVAF 447
            +I PQ  M+GQ PRQTTS LGHL KPS++AL+HGLN+HYY++ +++  +ELE+RML +L +  W++GL +    +  E+  K +K +  L + Y  +  I+E++++ +   VA AGK+DAK+ L+  V+ ++AT I  +MG ML TV F
Sbjct:  163 LISPQTMMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRKNELEERMLLNLSKRGWTSGLRLADFAQHSESNEKVIKELKGLAERY-DKAVIEEQELSPEARIVAGAGKMDAKKHLAAQVSSVMATNIAQSMGTMLDTVVF 310
[Close]
BLAST of mRNA_M-pyrifera_M_contig115676.3249.1 vs. uniprot
Match: A0A1Y1HYZ9_KLENI (Mov34/MPN/PAD-1 family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HYZ9_KLENI)

HSP 1 Score: 124 bits (312), Expect = 6.230e-32
Identity = 65/149 (43.62%), Postives = 102/149 (68.46%), Query Frame = 1 
Query:    1 MIKPQVAMMGQPPRQTTSVLGHLRKPSVKALMHGLNKHYYNMPLSFSHDELEDRMLSHLGRPEWSAGLEMGRMEEAEEAARKSLKRMVPLLKAYASEVTIKEEDMTEDDLAVAKAGKVDAKRDLSTIVNDLVATGITNAMGLMLSTVAF 447
            +I PQ  M+GQ PRQTTS LGHL KPS++AL+HGLN+HYY++ +++  +ELE++ML +L + +W+ GL + R +   +   K++  M+ L K Y + V I+E+++T + LAVA  G+ DAK+ L   V+ L+A+ I   +G M+ TV F
Sbjct:  166 LINPQTMMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIGINYRKNELEEKMLLNLHKKKWTDGLNLQRFDAHAKTNEKTVTEMLDLAKKYNTAV-IEEDELTPEKLAVANVGRQDAKKHLEENVSSLMASNIVQTLGTMMDTVVF 313
[Close]
BLAST of mRNA_M-pyrifera_M_contig115676.3249.1 vs. uniprot
Match: A0A250X340_9CHLO (MPN domain-containing protein n=2 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X340_9CHLO)

HSP 1 Score: 124 bits (311), Expect = 8.240e-32
Identity = 66/149 (44.30%), Postives = 100/149 (67.11%), Query Frame = 1 
Query:    1 MIKPQVAMMGQPPRQTTSVLGHLRKPSVKALMHGLNKHYYNMPLSFSHDELEDRMLSHLGRPEWSAGLEMGRMEEAEEAARKSLKRMVPLLKAYASEVTIKEEDMTEDDLAVAKAGKVDAKRDLSTIVNDLVATGITNAMGLMLSTVAF 447
            +I PQ  M+GQ PRQTTS LGHL KPS++AL+HGLN+HYY++ +++  +ELE+RML +L +  W+AGL +   +   ++  K +K +  L   Y   V I+E+++T +   VA  GK+DAK+ L++ V  L+A+ I  A+G ML TV F
Sbjct:  163 LISPQTMMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRKNELEERMLLNLSKSSWTAGLTLTDFQAHNDSNEKVVKELKALADRYDKSV-IEEQELTPEKRVVANVGKMDAKKHLASNVGALMASNINQALGTMLDTVVF 310
[Close]
BLAST of mRNA_M-pyrifera_M_contig115676.3249.1 vs. uniprot
Match: A0A0M0K4V1_9EUKA (26s proteasome non-ATPase regulatory subunit 14-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K4V1_9EUKA)

HSP 1 Score: 124 bits (311), Expect = 8.410e-32
Identity = 67/149 (44.97%), Postives = 100/149 (67.11%), Query Frame = 1 
Query:    4 IKPQVAMMGQPPRQTTSVLGHLRKPSVKALMHGLNKHYYNMPLSFSHDELEDRMLSHLGRPEWSAGLEMGRMEEAEEAARKSLKRMVPLLKAYASEVTIKEE-DMTEDDLAVAKAGKVDAKRDLSTIVNDLVATGITNAMGLMLSTVAF 447
            I PQ+ M+GQ PRQTTS +GHL KPS++AL+HGLN+HYY++ LS+  ++LE +ML +L +  W+AGL +   +   E  R ++K MV L  AY  E  +K+E +++ + L VA  GK+DAK+ +S  +  L++  I  A+G ML TV F
Sbjct:  165 INPQMIMLGQEPRQTTSNVGHLNKPSIQALIHGLNRHYYSIALSYRKNDLEQKMLQNLHKKNWTAGLTLDNYDTHAEETRATVKEMVKLSAAY--EKAVKQETELSSEQLVVATVGKMDAKKRISEAMQRLMSANIVQALGTMLDTVVF 311
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115676.3249.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8DDZ8_CAFRO1.290e-3751.01MPN domain-containing protein n=3 Tax=Sar TaxID=26... [more]
A0A7S2WCS9_9STRA8.180e-3548.99Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A6H5KJB1_9PHAE6.770e-3446.98MPN domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835ZIK0_9STRA1.460e-3246.3126S proteasome regulatory subunit n=1 Tax=Tribonem... [more]
A0A5B8MY97_9CHLO1.530e-3245.64Regulatory subunit of 26S proteasome n=2 Tax=Chlor... [more]
A0A7S2C4F7_9STRA4.980e-3246.31Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A2K3E5K0_CHLRE5.860e-3243.62MPN domain-containing protein n=7 Tax=Chlamydomona... [more]
A0A1Y1HYZ9_KLENI6.230e-3243.62Mov34/MPN/PAD-1 family protein n=1 Tax=Klebsormidi... [more]
A0A250X340_9CHLO8.240e-3244.30MPN domain-containing protein n=2 Tax=Chlamydomona... [more]
A0A0M0K4V1_9EUKA8.410e-3244.9726s proteasome non-ATPase regulatory subunit 14-li... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig115676contigM-pyrifera_M_contig115676:119..565 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score132.9
Seed ortholog evalue1.3e-28
Seed eggNOG ortholog2880.D7FTN9
Preferred namePSMD14
KEGG koko:K03030
KEGG Pathwayko03050,ko05169,map03050,map05169
KEGG ModuleM00341
Hectar predicted targeting categoryother localisation
GOsGO:0000266,GO:0000502,GO:0000724,GO:0000725,GO:0000726,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0004175,GO:0004843,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005829,GO:0005838,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006303,GO:0006310,GO:0006464,GO:0006508,GO:0006511,GO:0006725,GO:0006807,GO:0006810,GO:0006887,GO:0006950,GO:0006955,GO:0006974,GO:0006996,GO:0007005,GO:0007031,GO:0007088,GO:0007346,GO:0008047,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0008237,GO:0008541,GO:0009056,GO:0009057,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010498,GO:0010564,GO:0010604,GO:0010638,GO:0010950,GO:0010952,GO:0010965,GO:0012505,GO:0016043,GO:0016192,GO:0016504,GO:0016559,GO:0016579,GO:0016787,GO:0019222,GO:0019538,GO:0019783,GO:0019941,GO:0022607,GO:0022624,GO:0030071,GO:0030141,GO:0030162,GO:0030163,GO:0030234,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0031410,GO:0031597,GO:0031974,GO:0031981,GO:0031982,GO:0031983,GO:0032268,GO:0032270,GO:0032436,GO:0032940,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0033554,GO:0034399,GO:0034515,GO:0034622,GO:0034641,GO:0034774,GO:0036211,GO:0036230,GO:0036459,GO:0042119,GO:0042176,GO:0043085,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043248,GO:0043299,GO:0043312,GO:0043412,GO:0043632,GO:0043687,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044433,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0045055,GO:0045321,GO:0045732,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045931,GO:0046483,GO:0046903,GO:0048285,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051336,GO:0051345,GO:0051603,GO:0051716,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0052547,GO:0052548,GO:0060205,GO:0060255,GO:0061133,GO:0061134,GO:0061135,GO:0061136,GO:0061578,GO:0062033,GO:0065003,GO:0065007,GO:0065009,GO:0070011,GO:0070013,GO:0070536,GO:0070628,GO:0070646,GO:0070647,GO:0071704,GO:0071840,GO:0080090,GO:0090068,GO:0090304,GO:0097708,GO:0098772,GO:0099503,GO:0101002,GO:0101005,GO:0140096,GO:1901360,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1902906,GO:1903050,GO:1903052,GO:1903362,GO:1903364,GO:1904813,GO:1905368,GO:1905369,GO:1905818,GO:1905820,GO:2001252
EggNOG free text desc.metallopeptidase activity
EggNOG OGsCOG1310@1,KOG1555@2759
COG Functional cat.ADK
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01002,ko03051,ko04121
Exons1
Model size447
Cds size447
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815672.8174036-CDS-M-pyrifera_M_contig115676:118..5651622815672.8174036-CDS-M-pyrifera_M_contig115676:118..565Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig115676 119..565 -
1692277515.1420372-CDS-M-pyrifera_M_contig115676:118..5651692277515.1420372-CDS-M-pyrifera_M_contig115676:118..565Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig115676 119..565 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig115676.3249.1prot_M-pyrifera_M_contig115676.3249.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig115676 119..565 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig115676.3249.1

>prot_M-pyrifera_M_contig115676.3249.1 ID=prot_M-pyrifera_M_contig115676.3249.1|Name=mRNA_M-pyrifera_M_contig115676.3249.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=149bp
MIKPQVAMMGQPPRQTTSVLGHLRKPSVKALMHGLNKHYYNMPLSFSHDE
LEDRMLSHLGRPEWSAGLEMGRMEEAEEAARKSLKRMVPLLKAYASEVTI
KEEDMTEDDLAVAKAGKVDAKRDLSTIVNDLVATGITNAMGLMLSTVAF
back to top

mRNA from alignment at M-pyrifera_M_contig115676:119..565-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig115676.3249.1 ID=mRNA_M-pyrifera_M_contig115676.3249.1|Name=mRNA_M-pyrifera_M_contig115676.3249.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=447bp|location=Sequence derived from alignment at M-pyrifera_M_contig115676:119..565- (Macrocystis pyrifera P11B4 male)
ATGATCAAGCCTCAGGTGGCGATGATGGGTCAGCCTCCTCGGCAGACGAC
TAGCGTGTTGGGCCACTTGCGGAAGCCTAGCGTGAAGGCTCTGATGCACG
GTCTGAACAAGCACTACTACAACATGCCCTTGTCGTTTTCGCACGATGAG
CTGGAAGACCGGATGCTCTCGCATTTGGGCAGGCCTGAGTGGAGTGCTGG
TCTGGAGATGGGGAGGATGGAGGAGGCGGAGGAGGCTGCAAGGAAGAGCC
TGAAGCGTATGGTGCCGCTTCTCAAGGCCTATGCCTCGGAAGTGACCATC
AAGGAGGAGGACATGACCGAGGATGACCTCGCAGTCGCGAAAGCAGGCAA
GGTCGACGCCAAGAGAGACCTCTCCACCATCGTGAACGACCTCGTGGCCA
CCGGAATCACTAACGCAATGGGACTCATGCTCTCCACCGTCGCGTTC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig115676:119..565-

>mRNA_M-pyrifera_M_contig115676.3249.1 ID=mRNA_M-pyrifera_M_contig115676.3249.1|Name=mRNA_M-pyrifera_M_contig115676.3249.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=894bp|location=Sequence derived from alignment at M-pyrifera_M_contig115676:119..565- (Macrocystis pyrifera P11B4 male)
ATGATCAAGCCTCAGGTGGCGATGATGGGTCAGCCTCCTCGGCAGACGAC
TAGCGTGTTGGGCCACTTGCGGAAGCCTAGCGTGAAGGCTCTGATGCACG
GTCTGAACAAGCACTACTACAACATGCCCTTGTCGTTTTCGCACGATGAG
CTGGAAGACCGGATGCTCTCGCATTTGGGCAGGCCTGAGTGGAGTGCTGG
TCTGGAGATGGGGAGGATGGAGGAGGCGGAGGAGGCTGCAAGGAAGAGCC
TGAAGCGTATGGTGCCGCTTCTCAAGGCCTATGCCTCGGAAGTGACCATC
AAGGAGGAGGACATGACCGAGGATGACCTCGCAGTCGCGAAAGCAGGCAA
GGTCGACGCCAAGAGAGACCTCTCCACCATCGTGAACGACCTCGTGGCCA
CCGGAATCACTAACGCAATGGGACTCATGCTCTCCACCGTCGCGTTCATG
ATCAAGCCTCAGGTGGCGATGATGGGTCAGCCTCCTCGGCAGACGACTAG
CGTGTTGGGCCACTTGCGGAAGCCTAGCGTGAAGGCTCTGATGCACGGTC
TGAACAAGCACTACTACAACATGCCCTTGTCGTTTTCGCACGATGAGCTG
GAAGACCGGATGCTCTCGCATTTGGGCAGGCCTGAGTGGAGTGCTGGTCT
GGAGATGGGGAGGATGGAGGAGGCGGAGGAGGCTGCAAGGAAGAGCCTGA
AGCGTATGGTGCCGCTTCTCAAGGCCTATGCCTCGGAAGTGACCATCAAG
GAGGAGGACATGACCGAGGATGACCTCGCAGTCGCGAAAGCAGGCAAGGT
CGACGCCAAGAGAGACCTCTCCACCATCGTGAACGACCTCGTGGCCACCG
GAATCACTAACGCAATGGGACTCATGCTCTCCACCGTCGCGTTC
back to top