mRNA_M-pyrifera_M_contig11567.3248.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11567.3248.1 vs. uniprot
Match: A0A835ZB92_9STRA (Propionyl-CoA carboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB92_9STRA) HSP 1 Score: 155 bits (391), Expect = 3.530e-37 Identity = 78/146 (53.42%), Postives = 102/146 (69.86%), Query Frame = 3
Query: 51 GAACRLTFDELAWNAASPLIKATVNDTRHVFQFLGHS--GEGYDLVMAGSHQHVVVRSPREQELSRHILPPPVLDHSRSLRCPMPGQVVSVSVGEGDVVEEGQPLAVVEAMKMQNVLKAQMSGRVSKVLCAPGETLRVDAVMMEFD 482
G ++ + W S L++ T++ + Q+ G S GEGY++ G++Q V+VR+P EQELSRH+LPP V+DHS +LRCPMPG V+SV+V EG VEEGQ LAVVEAMKMQNVLKA+ V V C G+ L+VDAVMMEF+
Sbjct: 577 GKKTKVAVGNVDWPVESVLLQGTLDGEKEALQYFGGSSTGEGYEVAFMGTYQTVIVRTPHEQELSRHLLPPVVVDHSNTLRCPMPGAVISVAVKEGQTVEEGQQLAVVEAMKMQNVLKAEARAVVKSVKCKAGDVLKVDAVMMEFE 722
BLAST of mRNA_M-pyrifera_M_contig11567.3248.1 vs. uniprot
Match: A0A7S2XZ22_9STRA (Propionyl-CoA carboxylase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ22_9STRA) HSP 1 Score: 124 bits (312), Expect = 5.810e-30 Identity = 70/153 (45.75%), Postives = 94/153 (61.44%), Query Frame = 3
Query: 33 TVTPEGGAACRLT--FDELAWNAASPLIKATVNDTRHVFQFLG-HSGEGYDLVMAGSHQHVVVRSPREQELSRHILPPPVLDHSRSLRCPMPGQVVSVSVGEGDVVEEGQPLAVVEAMKMQNVLKAQMSGRVSKVLCAPGETLRVDAVMMEFD 482
T+ E G+ T + W +PL+K + V Q+LG E LV G++ +VVVR+PRE EL++H+LPP +D+S+ L CPMPG VV V V EG VE GQ L VEAMKMQN+LKA+ V K+ C GE+L VD +M+EF+
Sbjct: 26 TIAKEDGSEAPATVRLQDYQWQNKAPLMKGVFDGKDRVVQYLGIKDSETMKLVYQGTYTNVVVRTPREHELAQHMLPPVEVDYSKFLVCPMPGVVVDVMVEEGQEVEIGQELICVEAMKMQNILKAEKKSLVKKINCTKGESLPVDFMMIEFE 178
BLAST of mRNA_M-pyrifera_M_contig11567.3248.1 vs. uniprot
Match: A0A7S1G9V2_9STRA (Propionyl-CoA carboxylase n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G9V2_9STRA) HSP 1 Score: 128 bits (322), Expect = 4.170e-28 Identity = 73/157 (46.50%), Postives = 96/157 (61.15%), Query Frame = 3
Query: 39 TPEGGAACRLTFDELAWNAASPLIKA---------TVNDTRHVFQFLGHSGEGYDLVMAGSHQHVVVRSPREQELSRHILPPPVLDHSRSLRCPMPGQVVSVSVGEGDVVEEGQPLAVVEAMKMQNVLKAQMSGRVSKVLCAPGETLRVDAVMMEFD 482
T EGG + ++ W +PL+ A V D + Q L + EG+ L G+ VVR+P +Q LSRH+LP P +D+S+ L PMPG +VSV+V EGD+VEEGQ LAVVEAMKMQNVL+A RV K+ A G TL VD V++EF+
Sbjct: 580 TEEGGPFVSVALEDFDWVPGAPLLTAEARSSAGDDAVGDASLIVQHLAATPEGFKLQFRGAVADAVVRTPAQQALSRHMLPKPEVDYSKLLVSPMPGMLVSVAVAEGDIVEEGQELAVVEAMKMQNVLRAHKRARVGKLPHAAGATLAVDDVIIEFE 736
BLAST of mRNA_M-pyrifera_M_contig11567.3248.1 vs. uniprot
Match: A0A5A8DH08_CAFRO (Uncharacterized protein n=4 Tax=Sar TaxID=2698737 RepID=A0A5A8DH08_CAFRO) HSP 1 Score: 119 bits (298), Expect = 5.870e-25 Identity = 63/147 (42.86%), Postives = 96/147 (65.31%), Query Frame = 3
Query: 81 LAWNAASPLIKATVNDTR--------------HVFQFLGHSGEGYDLVMAGSHQHVVVRSPREQELSRHILPPPVLDHSRSLRCPMPGQVVSVSVGEGDVVEEGQPLAVVEAMKMQNVLKAQMSGRVSKVLCAPGETLRVDAVMMEF 479
++W ++PL + ++ R + Q L H+ EGY L G+ + V+VRS R+Q+L+R +LP P +D S+ + PMPG++V VSV EG++V++GQ +AVVEAMKMQNVL+A +GR+ +V PG+TL VD V++EF
Sbjct: 741 VSWGPSTPLFLGSSSEMRVTQSEAADETEPRRAIVQHLDHAAEGYVLSSEGAERQVLVRSMRQQQLARWMLPKPEIDFSKVIVSPMPGKLVDVSVEEGEMVQQGQAVAVVEAMKMQNVLRAPKAGRIGRVAGVPGDTLVVDQVIVEF 887
BLAST of mRNA_M-pyrifera_M_contig11567.3248.1 vs. uniprot
Match: W7TIZ8_9STRA (Propionyl-CoA carboxylase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TIZ8_9STRA) HSP 1 Score: 118 bits (296), Expect = 9.560e-25 Identity = 61/138 (44.20%), Postives = 88/138 (63.77%), Query Frame = 3
Query: 66 LTFDELAWNAASPLIKATVNDTRHVFQFLGHSGEGYDLVMAGSHQHVVVRSPREQELSRHILPPPVLDHSRSLRCPMPGQVVSVSVGEGDVVEEGQPLAVVEAMKMQNVLKAQMSGRVSKVLCAPGETLRVDAVMMEF 479
+T ++ W PL +A ++ Q L GYDL G++ V V PREQ L +H+LP +D+S+ L+CPMPGQ++S++V EGDVVE GQ LA+VEAMKMQN+L+A + K+ G +L+VD V++EF
Sbjct: 640 VTVRDIDWELGVPLFRAHMDGGLRTLQCLASRTLGYDLFYGGAYLSVEVYEPREQALLKHMLPVLEVDNSKYLQCPMPGQLISLAVQEGDVVEVGQELAIVEAMKMQNILRAPKKTTIQKLRAEIGSSLKVDQVILEF 777
BLAST of mRNA_M-pyrifera_M_contig11567.3248.1 vs. uniprot
Match: A0A7R9VJ98_9STRA (Propionyl-CoA carboxylase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VJ98_9STRA) HSP 1 Score: 108 bits (271), Expect = 5.180e-24 Identity = 56/146 (38.36%), Postives = 91/146 (62.33%), Query Frame = 3
Query: 66 LTFDELAWNAASPLIKATVND-----TRHVFQFLGHSGEGYDLVMAGSHQHVVVRSPREQELSRHILPPPVLDHSRSLRCPMPGQVVSVSVGEGDVVEEGQPLAVVEAMKMQNVLKAQMSGRVSKVLCAPGETLRVDAVMMEFDFD 488
+ + W PL A++ + T Q L EG+ L + G+ V+ R+PR+ EL++H++P P +D+S++L PMPGQ+VSV+V G VE GQ L VVEAMKMQN+L++ G+++++ G TL+VD ++++F+ D
Sbjct: 50 IVIGDCGWEPEDPLFDASLAEDDGESTTVCCQHLERLPEGFKLQLEGAVADVICRTPRQHELAKHMIPKPKVDYSKALVSPMPGQLVSVNVTVGQEVEIGQELCVVEAMKMQNLLRSTRKGKIAEICFEAGATLKVDDIILKFEDD 195
BLAST of mRNA_M-pyrifera_M_contig11567.3248.1 vs. uniprot
Match: A0A2W4UMX6_9PROT (Propionyl-CoA carboxylase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2W4UMX6_9PROT) HSP 1 Score: 115 bits (289), Expect = 6.220e-24 Identity = 61/131 (46.56%), Postives = 83/131 (63.36%), Query Frame = 3
Query: 87 WNAASPLIKATVNDTRHVFQFLGHSGEGYDLVMAGSHQHVVVRSPREQELSRHILPPPVLDHSRSLRCPMPGQVVSVSVGEGDVVEEGQPLAVVEAMKMQNVLKAQMSGRVSKVLCAPGETLRVDAVMMEF 479
W SPL +A ++ + G G + G++ V V +PR EL+R ++P D S+ L CPMPG VVS++V EGD VE GQPLA VEAMKM+N+L+A+ SG V KVL G++L VDAV++EF
Sbjct: 540 WRVGSPLFEADIDGITRSLS-IERQGSGLKISTRGANHRVRVLTPRAAELARFMIPKVAPDMSKYLLCPMPGLVVSIAVAEGDKVEAGQPLATVEAMKMENILRAEKSGTVGKVLAKAGDSLAVDAVILEF 669
BLAST of mRNA_M-pyrifera_M_contig11567.3248.1 vs. uniprot
Match: A0A024T8T8_9STRA (Propionyl-CoA carboxylase alpha chain, mitochondrial n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024T8T8_9STRA) HSP 1 Score: 115 bits (289), Expect = 6.960e-24 Identity = 60/136 (44.12%), Postives = 86/136 (63.24%), Query Frame = 3
Query: 75 DELAWNAASPLIKATVNDTRHVFQFLGHSGEGYDLVMAGSHQHVVVRSPREQELSRHILPPPVLDHSRSLRCPMPGQVVSVSVGEGDVVEEGQPLAVVEAMKMQNVLKAQMSGRVSKVLCAPGETLRVDAVMMEFD 482
++ W+ PL A ++ + Q L EG+ + G+ V+VRSP+E ELS H+ P P +D SR + CPMPG +VSV+V GD V+ GQ +AVVEAMKMQNV++A G++ VL G L+VD V++EF+
Sbjct: 598 NDFDWSPKLPLFSAEISSKQRALQVLKKLPEGFKIQHHGAIHDVIVRSPKEHELSVHMKPKPKVDLSRFVLCPMPGLLVSVAVQVGDTVQIGQEVAVVEAMKMQNVIRASKKGKIKAVLHPAGAALKVDEVIVEFE 733
BLAST of mRNA_M-pyrifera_M_contig11567.3248.1 vs. uniprot
Match: A0A4V0YHW3_9SPHN (Propionyl-CoA carboxylase n=2 Tax=Sphingomonadales TaxID=204457 RepID=A0A4V0YHW3_9SPHN) HSP 1 Score: 115 bits (288), Expect = 8.310e-24 Identity = 61/132 (46.21%), Postives = 83/132 (62.88%), Query Frame = 3
Query: 87 WNAASPLIKATVNDTRHVFQFLGHSGEGYDLVMAGSHQHVVVRSPREQELSRHILPPPVLDHSRSLRCPMPGQVVSVSVGEGDVVEEGQPLAVVEAMKMQNVLKAQMSGRVSKVLCAPGETLRVDAVMMEFD 482
W PLIKA +++ Q + G + L G+ V V +LSRH++ D S+ L CPMPG + +++VGEGD VE GQPLAVVEAMKM+N+L+A+ SGRV V PGE+L VDAV++EF+
Sbjct: 539 WEPGQPLIKARIDERSRTVQ-IARKGRQWQLTSRGASHRVDVLPAHVADLSRHMIEKIPPDLSKYLICPMPGLLTALNVGEGDAVEAGQPLAVVEAMKMENILRAEKSGRVKTVSAKPGESLAVDAVILEFE 669
BLAST of mRNA_M-pyrifera_M_contig11567.3248.1 vs. uniprot
Match: A0A7Z8L9G6_9RHOB (Propionyl-CoA carboxylase n=1 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A7Z8L9G6_9RHOB) HSP 1 Score: 114 bits (286), Expect = 1.490e-23 Identity = 65/140 (46.43%), Postives = 89/140 (63.57%), Query Frame = 3
Query: 63 RLTFDELAWNAASPLIKATVNDTRHVFQFLGHSGEGYDLVMAGSHQHVVVRSPREQELSRHILPPPVLDHSRSLRCPMPGQVVSVSVGEGDVVEEGQPLAVVEAMKMQNVLKAQMSGRVSKVLCAPGETLRVDAVMMEFD 482
R+T D W PL + V+D V + SG GY L + G+ V V SPR+ EL+ +++ D S+ L CPMPG VVS++V EGD V EGQPLA +EAMKM+N+L+A GRV+++ APG +L VD V+MEF+
Sbjct: 530 RITSD---WLPGQPLARLMVDDQALVMKVARLSG-GYRLRLRGADLKVHVFSPRQAELAANMIEKQPPDTSKLLLCPMPGMVVSIAVSEGDEVHEGQPLATIEAMKMENILRADRKGRVARINAAPGASLAVDDVIMEFE 665 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11567.3248.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11567.3248.1 >prot_M-pyrifera_M_contig11567.3248.1 ID=prot_M-pyrifera_M_contig11567.3248.1|Name=mRNA_M-pyrifera_M_contig11567.3248.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=156bp MALTVTPEGGAACRLTFDELAWNAASPLIKATVNDTRHVFQFLGHSGEGYback to top mRNA from alignment at M-pyrifera_M_contig11567:1234..5121- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11567.3248.1 ID=mRNA_M-pyrifera_M_contig11567.3248.1|Name=mRNA_M-pyrifera_M_contig11567.3248.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3888bp|location=Sequence derived from alignment at M-pyrifera_M_contig11567:1234..5121- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11567:1234..5121- >mRNA_M-pyrifera_M_contig11567.3248.1 ID=mRNA_M-pyrifera_M_contig11567.3248.1|Name=mRNA_M-pyrifera_M_contig11567.3248.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=936bp|location=Sequence derived from alignment at M-pyrifera_M_contig11567:1234..5121- (Macrocystis pyrifera P11B4 male)back to top |