mRNA_M-pyrifera_M_contig115668.3247.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig115668.3247.1 vs. uniprot
Match: A0A3T1DZ78_9GAMM (ABC transporter substrate-binding protein n=2 Tax=Halomonas olivaria TaxID=390919 RepID=A0A3T1DZ78_9GAMM) HSP 1 Score: 371 bits (953), Expect = 3.910e-129 Identity = 185/188 (98.40%), Postives = 186/188 (98.94%), Query Frame = 1
Query: 1 DMALTGASVTDERLRVFNYAPPFASAQHFYIKRAGDDRINSVEDLSGMTLGVQAGSALLSRLPELEVMLEESGGELGDVMEYEAYPEIYADLANGRVDYVINSIVPVNDLIRERPDVFEAGQAVSGTGFVAWPMPKDSPELLTYITDFMSHLRDSGRLAELQEKWFGESFDDLPTTPITSVEEFHEMA 564
DMALTGASVTDERLRVFNYAPPFASAQHFYIKRAGDDRINS+EDLSGMTLGVQAGSALLSRLPELEVMLEESGGELGDVMEYEAYPEIYADLANGRVDYVINSIVPVNDLIRERPDVFEAGQAVSG GFVAWPMPK SPELLTYITDFMSHLRDSGRLAELQEKWFGESFDDLPTTPITSVEEFHEMA
Sbjct: 59 DMALTGASVTDERLRVFNYAPPFASAQHFYIKRAGDDRINSIEDLSGMTLGVQAGSALLSRLPELEVMLEESGGELGDVMEYEAYPEIYADLANGRVDYVINSIVPVNDLIRERPDVFEAGQAVSGPGFVAWPMPKGSPELLTYITDFMSHLRDSGRLAELQEKWFGESFDDLPTTPITSVEEFHEMA 246
BLAST of mRNA_M-pyrifera_M_contig115668.3247.1 vs. uniprot
Match: A0A0F9W4D5_9ZZZZ (PBPb domain-containing protein n=29 Tax=root TaxID=1 RepID=A0A0F9W4D5_9ZZZZ) HSP 1 Score: 360 bits (925), Expect = 2.630e-124 Identity = 178/188 (94.68%), Postives = 183/188 (97.34%), Query Frame = 1
Query: 1 DMALTGASVTDERLRVFNYAPPFASAQHFYIKRAGDDRINSVEDLSGMTLGVQAGSALLSRLPELEVMLEESGGELGDVMEYEAYPEIYADLANGRVDYVINSIVPVNDLIRERPDVFEAGQAVSGTGFVAWPMPKDSPELLTYITDFMSHLRDSGRLAELQEKWFGESFDDLPTTPITSVEEFHEMA 564
DMALTGASVTDERLRVFNYAPPFASAQHFYIKRAGDDRINS+EDLSG+TLGVQAGSALLSRLPELE MLEESGGELG+VMEYEAYPEIYADLANGRVDYVINSIVPVNDLI ERPDVFEAGQAVSG G+VAWPMPK SPELL YITDFMSHLRDSGRLAELQE+WFGESFDDLPTTPITSVEEFHEMA
Sbjct: 96 DMALTGASVTDERLRVFNYAPPFASAQHFYIKRAGDDRINSIEDLSGLTLGVQAGSALLSRLPELEAMLEESGGELGEVMEYEAYPEIYADLANGRVDYVINSIVPVNDLISERPDVFEAGQAVSGPGYVAWPMPKSSPELLAYITDFMSHLRDSGRLAELQEEWFGESFDDLPTTPITSVEEFHEMA 283
BLAST of mRNA_M-pyrifera_M_contig115668.3247.1 vs. uniprot
Match: A0A0N8KJ56_9GAMM (PBPb domain-containing protein n=2 Tax=unclassified Halomonas TaxID=2609666 RepID=A0A0N8KJ56_9GAMM) HSP 1 Score: 342 bits (878), Expect = 3.750e-117 Identity = 168/188 (89.36%), Postives = 179/188 (95.21%), Query Frame = 1
Query: 1 DMALTGASVTDERLRVFNYAPPFASAQHFYIKRAGDDRINSVEDLSGMTLGVQAGSALLSRLPELEVMLEESGGELGDVMEYEAYPEIYADLANGRVDYVINSIVPVNDLIRERPDVFEAGQAVSGTGFVAWPMPKDSPELLTYITDFMSHLRDSGRLAELQEKWFGESFDDLPTTPITSVEEFHEMA 564
DMALTGASVTDER+RVFNYAPPFASAQH+YIKRAGDDRINSVEDLSGMTLGVQAGSALLSRLPELE ML ESGGELG+V+EYEAYPEIYADLAN RVDYVINSIVPVND++RERPD FEAGQAVSG GFVAWPMPKDSPELL Y+T+FM+HLRDSGRLAELQEKWF ESFDDLP PIT+V+EFHEMA
Sbjct: 96 DMALTGASVTDERMRVFNYAPPFASAQHYYIKRAGDDRINSVEDLSGMTLGVQAGSALLSRLPELEEMLAESGGELGEVVEYEAYPEIYADLANERVDYVINSIVPVNDVVRERPDEFEAGQAVSGPGFVAWPMPKDSPELLEYMTEFMAHLRDSGRLAELQEKWFNESFDDLPEEPITTVDEFHEMA 283
BLAST of mRNA_M-pyrifera_M_contig115668.3247.1 vs. uniprot
Match: A0A4U3C5Z2_9GAMM (Transporter substrate-binding domain-containing protein n=3 Tax=Halomonadaceae TaxID=28256 RepID=A0A4U3C5Z2_9GAMM) HSP 1 Score: 329 bits (843), Expect = 7.940e-112 Identity = 160/188 (85.11%), Postives = 176/188 (93.62%), Query Frame = 1
Query: 1 DMALTGASVTDERLRVFNYAPPFASAQHFYIKRAGDDRINSVEDLSGMTLGVQAGSALLSRLPELEVMLEESGGELGDVMEYEAYPEIYADLANGRVDYVINSIVPVNDLIRERPDVFEAGQAVSGTGFVAWPMPKDSPELLTYITDFMSHLRDSGRLAELQEKWFGESFDDLPTTPITSVEEFHEMA 564
D+A+TGASV+DERLRVFNYAPPFASAQHFYIKRAGDDRINSV DL GMT+GVQAGS LL+RLPELE MLEE+GGELG+VMEYEAYPEIYADLANGR+DYVINS VPVNDLI R DVFEAGQAVSG GFVAWP+PK+SPELLTY+TDFM+HLR+SGRL ELQE WFGESF++LPTTPI SVEEFH+MA
Sbjct: 96 DVAITGASVSDERLRVFNYAPPFASAQHFYIKRAGDDRINSVADLDGMTVGVQAGSVLLTRLPELEAMLEETGGELGNVMEYEAYPEIYADLANGRLDYVINSAVPVNDLISTRGDVFEAGQAVSGPGFVAWPVPKNSPELLTYLTDFMAHLRESGRLYELQETWFGESFEELPTTPIMSVEEFHQMA 283
BLAST of mRNA_M-pyrifera_M_contig115668.3247.1 vs. uniprot
Match: A0A3S0X176_9GAMM (Transporter substrate-binding domain-containing protein n=1 Tax=Halomonas populi TaxID=2498858 RepID=A0A3S0X176_9GAMM) HSP 1 Score: 326 bits (835), Expect = 2.950e-110 Identity = 160/188 (85.11%), Postives = 170/188 (90.43%), Query Frame = 1
Query: 1 DMALTGASVTDERLRVFNYAPPFASAQHFYIKRAGDDRINSVEDLSGMTLGVQAGSALLSRLPELEVMLEESGGELGDVMEYEAYPEIYADLANGRVDYVINSIVPVNDLIRERPDVFEAGQAVSGTGFVAWPMPKDSPELLTYITDFMSHLRDSGRLAELQEKWFGESFDDLPTTPITSVEEFHEMA 564
D A+TGASV+DERLRVFNYAPPFASAQHFYIKRA DD INS+ DL G T+GVQAGS LLSRLPELE MLEESGG LG VMEYEAYPEIYADLANGR+DYVINS VPVNDLI ER D+F AGQAVSG GFVAWP+PK+SPELLTY+TDFM+HLRDSGRL ELQE WFGESFDDLPTTPITSV EFHEMA
Sbjct: 120 DAAITGASVSDERLRVFNYAPPFASAQHFYIKRADDDSINSIADLDGKTVGVQAGSVLLSRLPELEAMLEESGGSLGTVMEYEAYPEIYADLANGRLDYVINSAVPVNDLINERGDIFAAGQAVSGPGFVAWPVPKNSPELLTYLTDFMAHLRDSGRLKELQEVWFGESFDDLPTTPITSVAEFHEMA 307
BLAST of mRNA_M-pyrifera_M_contig115668.3247.1 vs. uniprot
Match: N6W084_9GAMM (Amino acid ABC transporter substrate-binding protein n=1 Tax=Marinobacter nanhaiticus D15-8W TaxID=626887 RepID=N6W084_9GAMM) HSP 1 Score: 317 bits (812), Expect = 6.180e-107 Identity = 151/188 (80.32%), Postives = 172/188 (91.49%), Query Frame = 1
Query: 1 DMALTGASVTDERLRVFNYAPPFASAQHFYIKRAGDDRINSVEDLSGMTLGVQAGSALLSRLPELEVMLEESGGELGDVMEYEAYPEIYADLANGRVDYVINSIVPVNDLIRERPDVFEAGQAVSGTGFVAWPMPKDSPELLTYITDFMSHLRDSGRLAELQEKWFGESFDDLPTTPITSVEEFHEMA 564
D A+TGASV+DERLRVFNYAPPFASAQHFYIKRAGDDRI SV DL GMT+GVQAGS LLSRLPELE MLEE+GGELG+V++YEAYPEIYADLANGR+DY INS VPVNDLI+ER DVFEAGQAVSG GFV WP+PK + ELL Y+TDF++H+R++GRLAELQEKWFG++FDDLP PITSV+EFH+MA
Sbjct: 108 DAAITGASVSDERLRVFNYAPPFASAQHFYIKRAGDDRIKSVADLDGMTVGVQAGSVLLSRLPELEAMLEETGGELGEVVQYEAYPEIYADLANGRLDYAINSAVPVNDLIKERGDVFEAGQAVSGPGFVGWPVPKANAELLAYLTDFLNHMRETGRLAELQEKWFGQAFDDLPKVPITSVDEFHQMA 295
BLAST of mRNA_M-pyrifera_M_contig115668.3247.1 vs. uniprot
Match: A0A2T6E604_9GAMM (Amino acid ABC transporter substrate-binding protein n=2 Tax=Saccharospirillum TaxID=231683 RepID=A0A2T6E604_9GAMM) HSP 1 Score: 311 bits (797), Expect = 8.710e-105 Identity = 148/188 (78.72%), Postives = 170/188 (90.43%), Query Frame = 1
Query: 1 DMALTGASVTDERLRVFNYAPPFASAQHFYIKRAGDDRINSVEDLSGMTLGVQAGSALLSRLPELEVMLEESGGELGDVMEYEAYPEIYADLANGRVDYVINSIVPVNDLIRERPDVFEAGQAVSGTGFVAWPMPKDSPELLTYITDFMSHLRDSGRLAELQEKWFGESFDDLPTTPITSVEEFHEMA 564
D A+TGAS++DER+RVFNYAPPFASAQHFYIKRA DDR+NSV DL GMT+GVQAGS LLSRLPELE MLEESGGELGDV++YEAYPEIYADLANGR+DYVINS VPVNDLI ER D+F AGQAVSG GFV WP+PK+SPELL ++TDFM+ ++ SGRLAELQE+WFGE+F DLP PIT+VEEFH++A
Sbjct: 99 DAAITGASISDERMRVFNYAPPFASAQHFYIKRADDDRLNSVADLDGMTVGVQAGSVLLSRLPELEAMLEESGGELGDVVQYEAYPEIYADLANGRLDYVINSAVPVNDLIAERGDIFAAGQAVSGPGFVGWPVPKNSPELLAFLTDFMNEMKASGRLAELQEEWFGEAFPDLPEVPITTVEEFHDLA 286
BLAST of mRNA_M-pyrifera_M_contig115668.3247.1 vs. uniprot
Match: A0A4R7NN69_9GAMM (Amino acid ABC transporter substrate-binding protein (PAAT family) n=2 Tax=Chromohalobacter marismortui TaxID=42055 RepID=A0A4R7NN69_9GAMM) HSP 1 Score: 300 bits (767), Expect = 3.740e-100 Identity = 141/188 (75.00%), Postives = 167/188 (88.83%), Query Frame = 1
Query: 1 DMALTGASVTDERLRVFNYAPPFASAQHFYIKRAGDDRINSVEDLSGMTLGVQAGSALLSRLPELEVMLEESGGELGDVMEYEAYPEIYADLANGRVDYVINSIVPVNDLIRERPDVFEAGQAVSGTGFVAWPMPKDSPELLTYITDFMSHLRDSGRLAELQEKWFGESFDDLPTTPITSVEEFHEMA 564
DMALTGASV+DERLRVFNY PP+ASAQHFYIKRAGD+R+ SV DLSG TLGVQAGS LLSRLPELE MLEE GGELG+V+EY +YPE +ADLANGR+DYVI+S VPVN L+ +PDVF GQAVSG G+V+WP+PKDSPELL Y+TDF+ H++++GRLAELQ+KWFGESF +LP P+TSVE+FHE+A
Sbjct: 102 DMALTGASVSDERLRVFNYTPPYASAQHFYIKRAGDERLQSVADLSGKTLGVQAGSVLLSRLPELEKMLEERGGELGEVVEYASYPEAFADLANGRLDYVIDSAVPVNTLVASKPDVFAKGQAVSGAGYVSWPIPKDSPELLAYMTDFLEHMKETGRLAELQKKWFGESFPNLPDEPLTSVEQFHELA 289
BLAST of mRNA_M-pyrifera_M_contig115668.3247.1 vs. uniprot
Match: UPI001EF536B0 (transporter substrate-binding domain-containing protein n=1 Tax=Halomonas sp. McH1-25 TaxID=2917740 RepID=UPI001EF536B0) HSP 1 Score: 298 bits (763), Expect = 1.570e-99 Identity = 141/188 (75.00%), Postives = 167/188 (88.83%), Query Frame = 1
Query: 1 DMALTGASVTDERLRVFNYAPPFASAQHFYIKRAGDDRINSVEDLSGMTLGVQAGSALLSRLPELEVMLEESGGELGDVMEYEAYPEIYADLANGRVDYVINSIVPVNDLIRERPDVFEAGQAVSGTGFVAWPMPKDSPELLTYITDFMSHLRDSGRLAELQEKWFGESFDDLPTTPITSVEEFHEMA 564
DMALTGASV+DERLRVFNY PP+ASAQHFYIKRA DDR+NSV DLSG T+GVQAGS LLSRLPELE MLEE GGELG+V++YE+YPE +ADLANGR+DYVI+S VPVN L+ +PDVF AGQAVSG G+V+WP+PK SPELL Y+T F++ +R+SG+LAELQEKWFG+SF DLP P+TSVE+FHE+A
Sbjct: 103 DMALTGASVSDERLRVFNYTPPYASAQHFYIKRADDDRLNSVADLSGKTVGVQAGSVLLSRLPELEAMLEEQGGELGEVVQYESYPEAFADLANGRLDYVIDSAVPVNALVTSKPDVFAAGQAVSGPGYVSWPIPKGSPELLDYMTGFLAEMRESGKLAELQEKWFGQSFPDLPQEPLTSVEQFHELA 290
BLAST of mRNA_M-pyrifera_M_contig115668.3247.1 vs. uniprot
Match: Q1R188_CHRSD (Amino acid ABC transporter substrate-binding protein, PAAT family n=5 Tax=Chromohalobacter salexigens TaxID=158080 RepID=Q1R188_CHRSD) HSP 1 Score: 298 bits (763), Expect = 2.410e-99 Identity = 140/188 (74.47%), Postives = 167/188 (88.83%), Query Frame = 1
Query: 1 DMALTGASVTDERLRVFNYAPPFASAQHFYIKRAGDDRINSVEDLSGMTLGVQAGSALLSRLPELEVMLEESGGELGDVMEYEAYPEIYADLANGRVDYVINSIVPVNDLIRERPDVFEAGQAVSGTGFVAWPMPKDSPELLTYITDFMSHLRDSGRLAELQEKWFGESFDDLPTTPITSVEEFHEMA 564
DMALTGASV+DERLRVFNY PP+ASAQHFYIKRA DD + SV DLSG TLGVQAGS LLSRLPELE MLEE GELG+V+EYE+YPE +ADLANGR+DYVI+S VPVN L+ +P++F GQAVSG G+V+WP+PKDSPELL Y+T+F++H+++SGRLAELQEKWFGESF DLP+ P+TSVE+FHE+A
Sbjct: 116 DMALTGASVSDERLRVFNYTPPYASAQHFYIKRADDDSLQSVADLSGKTLGVQAGSVLLSRLPELEQMLEEQDGELGEVVEYESYPEAFADLANGRLDYVIDSAVPVNTLVASKPEIFAKGQAVSGAGYVSWPIPKDSPELLDYMTEFLAHMQESGRLAELQEKWFGESFSDLPSKPLTSVEQFHELA 303 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115668.3247.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig115668.3247.1 >prot_M-pyrifera_M_contig115668.3247.1 ID=prot_M-pyrifera_M_contig115668.3247.1|Name=mRNA_M-pyrifera_M_contig115668.3247.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=187bp MALTGASVTDERLRVFNYAPPFASAQHFYIKRAGDDRINSVEDLSGMTLGback to top mRNA from alignment at M-pyrifera_M_contig115668:1..564- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig115668.3247.1 ID=mRNA_M-pyrifera_M_contig115668.3247.1|Name=mRNA_M-pyrifera_M_contig115668.3247.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=564bp|location=Sequence derived from alignment at M-pyrifera_M_contig115668:1..564- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig115668:1..564- >mRNA_M-pyrifera_M_contig115668.3247.1 ID=mRNA_M-pyrifera_M_contig115668.3247.1|Name=mRNA_M-pyrifera_M_contig115668.3247.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1122bp|location=Sequence derived from alignment at M-pyrifera_M_contig115668:1..564- (Macrocystis pyrifera P11B4 male)back to top |