mRNA_M-pyrifera_M_contig115522.3219.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig115522.3219.1 vs. uniprot
Match: A0A2E7D5T3_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7D5T3_9PLAN) HSP 1 Score: 89.0 bits (219), Expect = 9.630e-19 Identity = 40/85 (47.06%), Postives = 63/85 (74.12%), Query Frame = 1
Query: 1 SGMLEQLLPSGLRLVPIGLMFLLLLIYLAAIGPFDYWFLGKLRLRKLTWVMFPAMTVAFTSLAVWTSDQYMSSDDDRNTLIIRDV 255
G++E+L+PS +R+VP+ L+ LL +Y+ AIGP D+ LG R+R+ TW++FPA+TV FT VW S +YM+++ + +LI+RDV
Sbjct: 381 GGLVERLMPSDVRVVPLSLIGFLLFLYVMAIGPADFIILGIFRIRRFTWILFPAVTVGFTLFTVWLSHRYMATNQSQGSLIVRDV 465
BLAST of mRNA_M-pyrifera_M_contig115522.3219.1 vs. uniprot
Match: UPI00029A3C42 (hypothetical protein n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=UPI00029A3C42) HSP 1 Score: 80.1 bits (196), Expect = 1.240e-15 Identity = 36/83 (43.37%), Postives = 60/83 (72.29%), Query Frame = 1
Query: 7 MLEQLLPSGLRLVPIGLMFLLLLIYLAAIGPFDYWFLGKLRLRKLTWVMFPAMTVAFTSLAVWTSDQYMSSDDDRNTLIIRDV 255
++E+L+P G+R+VP+ ++ +L+ ++ IGP +Y+ LG LRLRKLTW+ FPA T+ T+L +W S+ YMS+ + R + I D+
Sbjct: 337 LIERLMPEGVRMVPLSVLATILVAFVILIGPGEYFVLGWLRLRKLTWLTFPAATIGVTALTIWVSNSYMSAAETRRAVTICDL 419
BLAST of mRNA_M-pyrifera_M_contig115522.3219.1 vs. uniprot
Match: A0A3B8PQM9_9PLAN (Uncharacterized protein n=2 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3B8PQM9_9PLAN) HSP 1 Score: 80.1 bits (196), Expect = 1.250e-15 Identity = 39/87 (44.83%), Postives = 58/87 (66.67%), Query Frame = 1
Query: 1 SGMLEQLLPSGLRLVPIGLMFLLLLIYLAAIGPFDYWFLGKLRLRKLTWVMFPAMTVAFTSLAVWTSDQYMSSDDDRNTLIIRDVAE 261
+ ++ +L P +VP+ L+ LLL+ Y+ IGP DY LG L +RKLTW++FP MTVAFT L VW S ++M + + LI+RD+ +
Sbjct: 410 NSLVARLTPDDFEVVPLWLLGLLLIAYIVVIGPVDYLVLGWLGVRKLTWIVFPLMTVAFTLLIVWISHEHMGTSGNVRQLIVRDIGD 496
BLAST of mRNA_M-pyrifera_M_contig115522.3219.1 vs. uniprot
Match: A0A3B8M0C9_9PLAN (Uncharacterized protein n=2 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3B8M0C9_9PLAN) HSP 1 Score: 80.1 bits (196), Expect = 1.250e-15 Identity = 39/87 (44.83%), Postives = 58/87 (66.67%), Query Frame = 1
Query: 1 SGMLEQLLPSGLRLVPIGLMFLLLLIYLAAIGPFDYWFLGKLRLRKLTWVMFPAMTVAFTSLAVWTSDQYMSSDDDRNTLIIRDVAE 261
+ ++ +L P +VP+ L+ LLL+ Y+ IGP DY LG L +RKLTW++FP MTVAFT L VW S ++M + + LI+RD+ +
Sbjct: 410 NSLVARLTPDDFEVVPLWLLGLLLIAYIVVIGPVDYLVLGWLGVRKLTWIVFPLMTVAFTVLIVWISHEHMGTSGNVRQLIVRDIGD 496
BLAST of mRNA_M-pyrifera_M_contig115522.3219.1 vs. uniprot
Match: A0A517QU95_9PLAN (Uncharacterized protein n=1 Tax=Thalassoglobus polymorphus TaxID=2527994 RepID=A0A517QU95_9PLAN) HSP 1 Score: 77.4 bits (189), Expect = 1.100e-14 Identity = 37/85 (43.53%), Postives = 60/85 (70.59%), Query Frame = 1
Query: 1 SGMLEQLLPSGLRLVPIGLMFLLLLIYLAAIGPFDYWFLGKLRLRKLTWVMFPAMTVAFTSLAVWTSDQYMSSDDDRNTLIIRDV 255
+G+L + LP G++++P+ L+ + LL+Y+ AIGP DY+ LG L LRKLTW+ FP +TV FT A+ ++++ M D+ +II D+
Sbjct: 402 NGLLAETLPVGMQMLPLWLIGVTLLLYIIAIGPLDYFLLGALGLRKLTWIFFPVVTVLFTVGAIVSANRTMQGKDEGGRVIIHDI 486
BLAST of mRNA_M-pyrifera_M_contig115522.3219.1 vs. uniprot
Match: A0A7W0M8E2_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7W0M8E2_9PLAN) HSP 1 Score: 76.6 bits (187), Expect = 2.050e-14 Identity = 38/85 (44.71%), Postives = 59/85 (69.41%), Query Frame = 1
Query: 1 SGMLEQLLPSGLRLVPIGLMFLLLLIYLAAIGPFDYWFLGKLRLRKLTWVMFPAMTVAFTSLAVWTSDQYMSSDDDRNTLIIRDV 255
+G++E L P LR++P ++ L+L Y+A I P +YW LGKL++RK TWV FPA+T+A T V T+D +MS++D ++ I D+
Sbjct: 351 TGIVEALRPQNLRMIPGWVVMLILFGYVAVIAPGEYWLLGKLKMRKWTWVTFPAVTIALTWAVVATADSFMSANDHVRSVDIVDL 435
BLAST of mRNA_M-pyrifera_M_contig115522.3219.1 vs. uniprot
Match: A0A3L7SGZ7_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7SGZ7_9BACT) HSP 1 Score: 75.9 bits (185), Expect = 3.840e-14 Identity = 35/83 (42.17%), Postives = 59/83 (71.08%), Query Frame = 1
Query: 7 MLEQLLPSGLRLVPIGLMFLLLLIYLAAIGPFDYWFLGKLRLRKLTWVMFPAMTVAFTSLAVWTSDQYMSSDDDRNTLIIRDV 255
+L L P+G+++VP+ L+ ++L+ ++ IGP +Y+ LG LR RKLTW+ FP T+ TSL VW S++YM++ + R ++ I D+
Sbjct: 385 LLNHLTPTGVQIVPLWLLAMILIAFVCLIGPGEYFGLGLLRARKLTWITFPLATIGVTSLTVWLSNRYMTAGETRQSIEICDL 467
BLAST of mRNA_M-pyrifera_M_contig115522.3219.1 vs. uniprot
Match: A0A3L7UZ86_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7UZ86_9BACT) HSP 1 Score: 75.9 bits (185), Expect = 3.840e-14 Identity = 38/83 (45.78%), Postives = 58/83 (69.88%), Query Frame = 1
Query: 13 EQLLPSGLRLVPIGLMFLLLLIYLAAIGPFDYWFLGKLRLRKLTWVMFPAMTVAFTSLAVWTSDQYMSSDDDRNTLIIRDVAE 261
+ L+PS + +VPI ++ ++L+ Y+AAIGP DY+ LG LRLRK TWV+FP +T +FT L V + +M S+D L+I D+ +
Sbjct: 426 QALMPSDVEMVPIWIIGMILMGYVAAIGPGDYFLLGWLRLRKYTWVVFPVITGSFTLLTVLVAQAFMGSEDTGGKLVITDLVD 508
BLAST of mRNA_M-pyrifera_M_contig115522.3219.1 vs. uniprot
Match: A0A3L7VSR8_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7VSR8_9BACT) HSP 1 Score: 73.9 bits (180), Expect = 1.820e-13 Identity = 37/83 (44.58%), Postives = 57/83 (68.67%), Query Frame = 1
Query: 13 EQLLPSGLRLVPIGLMFLLLLIYLAAIGPFDYWFLGKLRLRKLTWVMFPAMTVAFTSLAVWTSDQYMSSDDDRNTLIIRDVAE 261
+ L+PS +++VP ++ ++L+ Y+ AIGP DY+ LG LRLRK TWV+FP +T FT L V + +M S+D L+I D+A+
Sbjct: 399 QALMPSDVQMVPTWIIGMILVGYVVAIGPGDYFLLGWLRLRKYTWVLFPVITGVFTLLTVMVAHAFMGSEDTGGKLVITDLAD 481
BLAST of mRNA_M-pyrifera_M_contig115522.3219.1 vs. uniprot
Match: A0A7C2JY79_9PLAN (Uncharacterized protein n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=A0A7C2JY79_9PLAN) HSP 1 Score: 70.1 bits (170), Expect = 4.100e-12 Identity = 38/81 (46.91%), Postives = 54/81 (66.67%), Query Frame = 1
Query: 13 EQLLPSGLRLVPIGLMFLLLLIYLAAIGPFDYWFLGKLRLRKLTWVMFPAMTVAFTSLAVWTSDQYMSSDDDRNTLIIRDV 255
+ L+P+G++LVP L+ LLL + IGP ++W LGKLRLR+ TW+ +PA TVA T+L V S+ YM S + L I D+
Sbjct: 376 KLLMPAGVQLVPFWLIVLLLGGLVVTIGPGEWWLLGKLRLRRFTWLTWPAATVAVTALTVGLSNSYMRSAEQSRFLQITDL 456 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115522.3219.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig115522.3219.1 >prot_M-pyrifera_M_contig115522.3219.1 ID=prot_M-pyrifera_M_contig115522.3219.1|Name=mRNA_M-pyrifera_M_contig115522.3219.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=85bp MLEQLLPSGLRLVPIGLMFLLLLIYLAAIGPFDYWFLGKLRLRKLTWVMFback to top mRNA from alignment at M-pyrifera_M_contig115522:306..566+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig115522.3219.1 ID=mRNA_M-pyrifera_M_contig115522.3219.1|Name=mRNA_M-pyrifera_M_contig115522.3219.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=261bp|location=Sequence derived from alignment at M-pyrifera_M_contig115522:306..566+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig115522:306..566+ >mRNA_M-pyrifera_M_contig115522.3219.1 ID=mRNA_M-pyrifera_M_contig115522.3219.1|Name=mRNA_M-pyrifera_M_contig115522.3219.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=510bp|location=Sequence derived from alignment at M-pyrifera_M_contig115522:306..566+ (Macrocystis pyrifera P11B4 male)back to top |