mRNA_M-pyrifera_M_contig115482.3209.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig115482.3209.1 vs. uniprot
Match: A0A7S4JMU8_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4JMU8_9EUKA) HSP 1 Score: 157 bits (396), Expect = 2.710e-42 Identity = 78/169 (46.15%), Postives = 116/169 (68.64%), Query Frame = 1
Query: 1 GSSFTIEGKQQKLDDSLQARFVEMRIKQGTRLKMARLKFNVNVQFVQLDGSMGKANLESNLSAPLIVMTNENQWESAEANLLRKTLFPAPGRNPDEVVRVPWHRFANTIQRHYLKATRQDPANPTRALSRYDMDYLHRNQFHCQELVVEQDFEKFWIWFGKVMHKIRHQ 507
G +FT++G Q+LD++ A F E+R +GTRLKM RL+F +V++ Q G + ES+ S+P I+MTNE+QW+ +E L +K F RN + W +F+N +Q HY++ATRQDP P R LS +D+ Y++R+QF +E+V ++DF++FW WFGKV+HKIRHQ
Sbjct: 207 GCNFTMQGDVQELDENNTATFSEIRFSRGTRLKMVRLQFMADVKYKQY-GQISSVVFESDPSSPFIIMTNESQWDFSEGILFKKDAFT---RNE-----ISWIQFSNILQMHYIRATRQDPEVPERPLSMHDLMYIYRSQFSEREIVTQKDFDRFWKWFGKVLHKIRHQ 366
BLAST of mRNA_M-pyrifera_M_contig115482.3209.1 vs. uniprot
Match: A0A7S4IVW3_9EUKA (Hypothetical protein n=2 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IVW3_9EUKA) HSP 1 Score: 149 bits (376), Expect = 4.170e-39 Identity = 80/168 (47.62%), Postives = 107/168 (63.69%), Query Frame = 1
Query: 7 SFTIEGKQQKLDDSLQARFVEMRIKQGTRLKMARLKFNVNVQFVQLDGSMGKANLESNLSAPLIVMTNENQWESAEANLLRKTLFPAPGRNPDEVVRVPWHRFANTIQRHYLKATRQDPANPTRALSRYDMDYLHR-NQFHCQELVVEQDFEKFWIWFGKVMHKIRHQ 507
S I +Q +DD ARF ++R G+R K+ RL+F V V +VQ +G +GK LES+L+ P IVMTNENQW+ +E LL+KT F A + W +FAN +Q HYL+ATRQ+PA P R LS ++ Y+ + +QF + V +DFE FW WFG MHKIRHQ
Sbjct: 289 SVEIHNSEQPMDDEGFARFPDLRFPSGSRQKVVRLQFVVEVTYVQPNGVVGKQLLESDLTQPFIVMTNENQWKVSEGALLKKTAFDAKET-------ISWPKFANLLQVHYLRATRQNPAEPKRPLSLRELQYISQLDQFKNKSAVHVRDFETFWNWFGDAMHKIRHQ 449
BLAST of mRNA_M-pyrifera_M_contig115482.3209.1 vs. uniprot
Match: A0A7S4IS38_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IS38_9EUKA) HSP 1 Score: 120 bits (301), Expect = 7.940e-29 Identity = 65/165 (39.39%), Postives = 96/165 (58.18%), Query Frame = 1
Query: 16 IEGKQQKLDDSLQARFVEMRIKQGTRLKMARLKFNVNVQFVQLDGSMGKANLES-NLSAPLIVMTNENQWESAEANLLRKTLFPAPGRNPDEVVRVPWHRFANTIQRHYLKATRQDPANPTRALSRYDMDYLHRNQFHCQELVVEQDFEKFWIWFGKVMHKIRHQ 507
I G Q+LD+SL + ++GTR +A+L+F V+VQ Q+ G +LES SAP +VMTN+ QWE E LL++ F + W +FAN +QR +++ATRQDP NP+R LS +D YLH + ++++E FW W+GK + IR+Q
Sbjct: 227 ISGHTQQLDNSLLKAQFPITFEEGTRKNVAKLRFIVDVQVEQM-GHKASGSLESITNSAPFVVMTNQKQWEGCERTLLQRDAFGGSAE-------ITWLQFANALQRQFIRATRQDPQNPSRCLSPFDFAYLHEKFIMKRPFFQQREYEAFWNWYGKCIQVIRYQ 383
BLAST of mRNA_M-pyrifera_M_contig115482.3209.1 vs. uniprot
Match: A0A8J4PSY0_9MYCE (Signal transducer and activator of transcription n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PSY0_9MYCE) HSP 1 Score: 118 bits (295), Expect = 1.140e-27 Identity = 66/165 (40.00%), Postives = 100/165 (60.61%), Query Frame = 1
Query: 13 TIEGKQQKLDDSLQARFVEMRIKQGTRLKMARLKFNVNVQFVQLDGSMGKANLESNLSAPLIVMTNENQWESAEANLLRKTLFPAPGRNPDEVVRVPWHRFANTIQRHYLKATRQDPANPTRALSRYDMDYLHRNQFHCQELVVEQDFEKFWIWFGKVMHKIRHQ 507
TIE + +D++ + ++ GTR LKF + VQ V G+ N+ES S+P IV+TNE Q+E ++ LL+K F G N D +PW +AN +QRH+L+ATRQD PTR LSR+++ Y+H++ F + + + F+ FWIWFGK + K+R+Q
Sbjct: 493 TIETEVVSMDETNRLAKYHLKFLNGTRKNPVTLKFGMQVQVV--GGT--PVNIESPPSSPFIVITNECQYEESDGTLLKKDSF---GNNTD----IPWASYANKLQRHFLRATRQDFMKPTRYLSRHELLYIHQHFFGGKPAISQSSFDAFWIWFGKGLQKLRYQ 646
BLAST of mRNA_M-pyrifera_M_contig115482.3209.1 vs. uniprot
Match: STATA_DICDI (Signal transducer and activator of transcription A n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=STATA_DICDI) HSP 1 Score: 117 bits (294), Expect = 1.490e-27 Identity = 60/141 (42.55%), Postives = 85/141 (60.28%), Query Frame = 1
Query: 85 GTRLKMARLKFNVNVQFVQLDGSMGKANLESNLSAPLIVMTNENQWESAEANLLRKTLFPAPGRNPDEVVRVPWHRFANTIQRHYLKATRQDPANPTRALSRYDMDYLHRNQFHCQELVVEQDFEKFWIWFGKVMHKIRHQ 507
GTR LKF VN++ LD +ES+ S P +V+TNE QWE + LL+K F D + + W +F NT+QRH+L AT+QDP P R LS YD+ Y+ + F + ++ +QDF+KFW+WFGK M +R+Q
Sbjct: 447 GTRKCSVNLKFGVNIR--DLDNVT--TTVESDASNPFVVITNECQWEGSAGVLLKKDAF-------DGQLEITWAQFINTLQRHFLIATKQDPVRPKRPLSSYDLKYIQTHFFGNRSIIHQQDFDKFWVWFGKSMQTLRYQ 576
BLAST of mRNA_M-pyrifera_M_contig115482.3209.1 vs. uniprot
Match: F1A659_DICPU (Signal transducer and activator of transcription n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F1A659_DICPU) HSP 1 Score: 117 bits (294), Expect = 1.520e-27 Identity = 64/165 (38.79%), Postives = 99/165 (60.00%), Query Frame = 1
Query: 13 TIEGKQQKLDDSLQARFVEMRIKQGTRLKMARLKFNVNVQFVQLDGSMGKANLESNLSAPLIVMTNENQWESAEANLLRKTLFPAPGRNPDEVVRVPWHRFANTIQRHYLKATRQDPANPTRALSRYDMDYLHRNQFHCQELVVEQDFEKFWIWFGKVMHKIRHQ 507
TIE + +D++ + ++ GTR LKF + VQ V G+ N+ES S+P IV+TNE Q+E ++ LL+K F G N + +PW +AN +QRH+L+ATRQD PTR LSR+++ Y+H F + ++ + F+ FW+WFGK + K+R+Q
Sbjct: 444 TIETEVVSMDETNRLAKYHLKFLNGTRKNPVTLKFGMQVQVV--GGT--PVNIESPPSSPFIVITNECQYEESDGTLLKKDSF---GNNNE----IPWASYANKLQRHFLRATRQDFMKPTRYLSRHELMYIHHQFFGSKPMIPQSSFDSFWVWFGKGLQKLRYQ 597
BLAST of mRNA_M-pyrifera_M_contig115482.3209.1 vs. uniprot
Match: F0ZVN4_DICPU (Uncharacterized protein dstA n=2 Tax=Dictyosteliaceae TaxID=2058185 RepID=F0ZVN4_DICPU) HSP 1 Score: 116 bits (290), Expect = 2.190e-27 Identity = 59/141 (41.84%), Postives = 85/141 (60.28%), Query Frame = 1
Query: 85 GTRLKMARLKFNVNVQFVQLDGSMGKANLESNLSAPLIVMTNENQWESAEANLLRKTLFPAPGRNPDEVVRVPWHRFANTIQRHYLKATRQDPANPTRALSRYDMDYLHRNQFHCQELVVEQDFEKFWIWFGKVMHKIRHQ 507
GTR LKF VN++ LD +ES+ S P +V+TNE QWE + LL+K F D + + W +F NT+QRH+L AT+QDP P R LS +D+ Y+ + F + ++ +QDF+KFW+WFGK M +R+Q
Sbjct: 222 GTRKCSVNLKFGVNIR--DLDNVT--TTVESDASNPFVVITNECQWEGSAGVLLKKDAF-------DGQLEITWAQFINTLQRHFLIATKQDPVRPKRPLSSFDLKYIQTHFFGNRSIIHQQDFDKFWVWFGKSMQTLRYQ 351
BLAST of mRNA_M-pyrifera_M_contig115482.3209.1 vs. uniprot
Match: UPI000644DBD7 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644DBD7) HSP 1 Score: 117 bits (292), Expect = 2.220e-27 Identity = 61/141 (43.26%), Postives = 86/141 (60.99%), Query Frame = 1
Query: 85 GTRLKMARLKFNVNVQFVQLDGSMGKANLESNLSAPLIVMTNENQWESAEANLLRKTLFPAPGRNPDEVVRVPWHRFANTIQRHYLKATRQDPANPTRALSRYDMDYLHRNQFHCQELVVEQDFEKFWIWFGKVMHKIRHQ 507
GTR LKF VN++ + +M A +ES+ S P +V+TNE QWE + LL+K F D + +PW +F NT+QRH+L AT+QDP P R LS++D Y+ F + L+ +QDF+KFW WFGK M +R+Q
Sbjct: 334 GTRKSSVNLKFGVNIRDMD---NMTTA-VESDASNPFVVITNECQWEGSAGVLLKKDAF-------DGQLEIPWPQFINTLQRHFLIATKQDPVRPKRPLSQFDFKYIQVQFFAGRTLIHQQDFDKFWNWFGKSMQTLRYQ 463
BLAST of mRNA_M-pyrifera_M_contig115482.3209.1 vs. uniprot
Match: F4Q5C0_CAVFA (Signal transducer and activator of transcription n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q5C0_CAVFA) HSP 1 Score: 117 bits (292), Expect = 2.890e-27 Identity = 67/169 (39.64%), Postives = 100/169 (59.17%), Query Frame = 1
Query: 1 GSSFTIEGKQQKLDDSLQARFVEMRIKQGTRLKMARLKFNVNVQFVQLDGSMGKANLESNLSAPLIVMTNENQWESAEANLLRKTLFPAPGRNPDEVVRVPWHRFANTIQRHYLKATRQDPANPTRALSRYDMDYLHRNQFHCQELVVEQDFEKFWIWFGKVMHKIRHQ 507
GS TIE + +D+ + ++ GTR LKF + VQ V G+ N+ES ++P IV+TNE Q+E ++ LL+K F G N + +PW +AN +QRH+L+ATRQD PTR LSR+++ YLH+ F + +V + F+ FW WFGK + K+R+Q
Sbjct: 490 GSPKTIETEVVSMDEVQRLAKYHLKFLNGTRKNPVTLKFGMQVQVV--GGT--PVNIESPPTSPFIVITNECQYEESDGTLLKKDSF---GNNAE----IPWASYANKLQRHFLRATRQDSIKPTRYLSRHELMYLHQQFFGGRSMVSQSMFDAFWNWFGKGLQKLRYQ 647
BLAST of mRNA_M-pyrifera_M_contig115482.3209.1 vs. uniprot
Match: STATC_DICDI (Signal transducer and activator of transcription C n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=STATC_DICDI) HSP 1 Score: 117 bits (292), Expect = 2.980e-27 Identity = 65/166 (39.16%), Postives = 99/166 (59.64%), Query Frame = 1
Query: 13 TIEGKQQKLDDSLQARFVEMRIKQGTRLKMARLKFNVNVQFVQLDGSMGKA-NLESNLSAPLIVMTNENQWESAEANLLRKTLFPAPGRNPDEVVRVPWHRFANTIQRHYLKATRQDPANPTRALSRYDMDYLHRNQFHCQELVVEQDFEKFWIWFGKVMHKIRHQ 507
TIE + +D++ + ++ GTR LKF + VQ V G A N+ES ++P IV+TNE Q+E ++ LL+K F G N + +PW +AN +QRH+L+ATRQD PTR LSR+++ Y+H F + ++ + F+ FWIWFGK + K+R+Q
Sbjct: 642 TIETEVVSMDETNRLAKYHLKFLNGTRKNPVTLKFGMQVQVVG-----GTAVNIESPPTSPFIVITNECQYEESDGTLLKKDSF---GNNNE----IPWASYANKLQRHFLRATRQDFMKPTRYLSRHELMYIHHQFFGSKPMIPQSSFDSFWIWFGKGLQKLRYQ 795 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115482.3209.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig115482.3209.1 >prot_M-pyrifera_M_contig115482.3209.1 ID=prot_M-pyrifera_M_contig115482.3209.1|Name=mRNA_M-pyrifera_M_contig115482.3209.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=169bp GSSFTIEGKQQKLDDSLQARFVEMRIKQGTRLKMARLKFNVNVQFVQLDGback to top mRNA from alignment at M-pyrifera_M_contig115482:1..507- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig115482.3209.1 ID=mRNA_M-pyrifera_M_contig115482.3209.1|Name=mRNA_M-pyrifera_M_contig115482.3209.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=507bp|location=Sequence derived from alignment at M-pyrifera_M_contig115482:1..507- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig115482:1..507- >mRNA_M-pyrifera_M_contig115482.3209.1 ID=mRNA_M-pyrifera_M_contig115482.3209.1|Name=mRNA_M-pyrifera_M_contig115482.3209.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1014bp|location=Sequence derived from alignment at M-pyrifera_M_contig115482:1..507- (Macrocystis pyrifera P11B4 male)back to top |