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Homology
BLAST of mRNA_M-pyrifera_M_contig11534.3193.1 vs. uniprot
Match: D7FHG3_ECTSI (40S ribosomal protein S8 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHG3_ECTSI) HSP 1 Score: 369 bits (947), Expect = 9.480e-124 Identity = 184/207 (88.89%), Postives = 195/207 (94.20%), Query Frame = 3
Query: 45 MGISRDSRHKRRETGGRRSKFRKKRKFEMGRPAANTKLGHKRVHPVRCRGGNMKYRALRLDTGNFSWGTEVCTRKTRILDVIYNASNNELVRTKTLVKNAIVVIDGHPFKSWYENHYGTVVGIKKGKKAPPKTDENAEAKSDHVQRKMAKRQAERTLDPLLDEQFASGRFIACISSRPGQSGRCDGYILEGKELEFYQKMLAKKKSK 665
MGISRDSRHKRRETGGRRSK+RKKRKFEMGRPAANTKLGHKRVHPVRCRGGNMKYRALRLD+GNFSWGTEVCTRKTRILDV+YNASNNELVRTKTLVKNAIVV+D HPFK WYENHYG V+G+KKGKKA P +E A AKSDHV+RK+AKRQ +RTL LLDEQ ASGRF+ACISSRPGQSGRCDGYILEGKELEFYQKMLAKKKSK
Sbjct: 1 MGISRDSRHKRRETGGRRSKYRKKRKFEMGRPAANTKLGHKRVHPVRCRGGNMKYRALRLDSGNFSWGTEVCTRKTRILDVVYNASNNELVRTKTLVKNAIVVVDAHPFKHWYENHYGVVIGLKKGKKAAP-VEEEAVAKSDHVKRKLAKRQTDRTLSTLLDEQVASGRFLACISSRPGQSGRCDGYILEGKELEFYQKMLAKKKSK 206
BLAST of mRNA_M-pyrifera_M_contig11534.3193.1 vs. uniprot
Match: A0A836CLT8_9STRA (40S ribosomal protein S8 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLT8_9STRA) HSP 1 Score: 317 bits (811), Expect = 4.100e-103 Identity = 161/212 (75.94%), Postives = 181/212 (85.38%), Query Frame = 3
Query: 45 MGISRDSRHKRRETGGRRSKFRKKRKFEMGRPAANTKLGHKRVHPVRCRGGNMKYRALRLDTGNFSWGTEVCTRKTRILDVIYNASNNELVRTKTLVKNAIVVIDGHPFKSWYENHYGTVVGIKKGK-----KAPPKTDENAEAKSDHVQRKMAKRQAERTLDPLLDEQFASGRFIACISSRPGQSGRCDGYILEGKELEFYQKMLAKKKSK 665
MGISRDSRHKRRETGG+R + RKKRKFE+GRPAANTK+G R+ VRCRGGN+K+RALRL+TGN+SWGTEVCTRKTRILDV+YNASNNELVRTKTLVK A+V ID PF+ WYE HYG +G+KKGK KA TDE A+ KSDHVQRK+A RQ R LD LLDEQFASGR +ACISSRPGQSGRCDGYILEGKELEFYQK+L++KK K
Sbjct: 1 MGISRDSRHKRRETGGKRCQVRKKRKFELGRPAANTKMGATRIRTVRCRGGNLKFRALRLETGNYSWGTEVCTRKTRILDVVYNASNNELVRTKTLVKGAVVSIDATPFRQWYEAHYGIAIGVKKGKRAAAGKAAATTDEEAK-KSDHVQRKLAARQKTRALDTLLDEQFASGRILACISSRPGQSGRCDGYILEGKELEFYQKILSRKKGK 211
BLAST of mRNA_M-pyrifera_M_contig11534.3193.1 vs. uniprot
Match: A0A7S2USH6_9STRA (40S ribosomal protein S8 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USH6_9STRA) HSP 1 Score: 317 bits (812), Expect = 5.590e-103 Identity = 159/207 (76.81%), Postives = 177/207 (85.51%), Query Frame = 3
Query: 45 MGISRDSRHKRRETGGRRSKFRKKRKFEMGRPAANTKLGHKRVHPVRCRGGNMKYRALRLDTGNFSWGTEVCTRKTRILDVIYNASNNELVRTKTLVKNAIVVIDGHPFKSWYENHYGTVVGIKKGKKAPPK--TDENAEAKSDHVQRKMAKRQAERTLDPLLDEQFASGRFIACISSRPGQSGRCDGYILEGKELEFYQKMLAKKK 659
MGISRDSRHKRR TGG+R+KFRKKRKFEMGRPAANTKLG KRVHPVRC GGNMKYRA+RL+ G +SWGTE +RK RILDV+YNASNNELVRTKTLVKNA+V+ID HPFK+WYE HYG V+G KKGK+ P K D+ KS HVQRK+AKRQ +RTL LD+QF GR +ACISSRPGQSGR DGYILEGKELEFYQKMLA+KK
Sbjct: 21 MGISRDSRHKRRHTGGKRAKFRKKRKFEMGRPAANTKLGTKRVHPVRCMGGNMKYRAMRLEAGTYSWGTEAISRKARILDVVYNASNNELVRTKTLVKNAVVLIDAHPFKAWYEAHYGVVIGKKKGKRMPKKDEADDEDAKKSSHVQRKIAKRQKDRTLMQNLDDQFVGGRLLACISSRPGQSGRADGYILEGKELEFYQKMLARKK 227
BLAST of mRNA_M-pyrifera_M_contig11534.3193.1 vs. uniprot
Match: A0A812SFI7_SYMMI (40S ribosomal protein S8 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SFI7_SYMMI) HSP 1 Score: 303 bits (775), Expect = 9.480e-98 Identity = 147/205 (71.71%), Postives = 175/205 (85.37%), Query Frame = 3
Query: 45 MGISRDSRHKRRETGGRRSKFRKKRKFEMGRPAANTKLGHKRVHPVRCRGGNMKYRALRLDTGNFSWGTEVCTRKTRILDVIYNASNNELVRTKTLVKNAIVVIDGHPFKSWYENHYGTVVGIKKGKKAPPKTDENAEAKSDHVQRKMAKRQAERTLDPLLDEQFASGRFIACISSRPGQSGRCDGYILEGKELEFYQKMLAKKK 659
MGISRDSRHKRR TGGR++ +KKR++E+GRP ANTKLG R+H VRCRGGN+K+RA+RLDTGNFSWG+EVCTRKTR+LDV+YNASNNELVRTKTLVKN+I+ +D PF++WYE HYG VG+KK KK + E+ E KS +QRK+A+RQ RTLDP LD+ F+SGR +ACISSRPGQSGRCDGYILEGKEL+FY KML KKK
Sbjct: 1 MGISRDSRHKRRATGGRKANLKKKRQYELGRPPANTKLGASRIHTVRCRGGNLKFRAMRLDTGNFSWGSEVCTRKTRVLDVVYNASNNELVRTKTLVKNSIIQVDATPFRAWYEQHYGVKVGVKKAKKTAAE-GEDTEKKSHSLQRKLAERQKTRTLDPALDDGFSSGRLLACISSRPGQSGRCDGYILEGKELDFYSKMLKKKK 204
BLAST of mRNA_M-pyrifera_M_contig11534.3193.1 vs. uniprot
Match: A0A7S1Z304_TRICV (40S ribosomal protein S8 n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z304_TRICV) HSP 1 Score: 300 bits (769), Expect = 6.170e-97 Identity = 151/204 (74.02%), Postives = 170/204 (83.33%), Query Frame = 3
Query: 45 MGISRDSRHKRRETGGRRSKFRKKRKFEMGRPAANTKLGHKRVHPVRCRGGNMKYRALRLDTGNFSWGTEVCTRKTRILDVIYNASNNELVRTKTLVKNAIVVIDGHPFKSWYENHYGTVVGIKKGKKAPPKTDENAEAKSDHVQRKMAKRQAERTLDPLLDEQFASGRFIACISSRPGQSGRCDGYILEGKELEFYQKMLAKK 656
MGISR+ RHKRRETGGRR K+RKKRKFE+GRPAA TK+G KRVH VRCRGGN+K+RALRLD+GNFSWGTEVCTRK RILDV YNASNNELVRTKTLVK AIV+ID HPFK WYE HYG +G+KKG+KA DE A KS+ VQRK+A RQ RTL+ LD QFASGR +A I+SRPGQ GRCDG +LEG EL FYQ+ +AKK
Sbjct: 1 MGISREGRHKRRETGGRREKYRKKRKFELGRPAAMTKIGEKRVHEVRCRGGNLKFRALRLDSGNFSWGTEVCTRKVRILDVTYNASNNELVRTKTLVKGAIVLIDAHPFKEWYEAHYGVKIGVKKGQKAH--ADEEAPKKSERVQRKLAARQKNRTLEQPLDHQFASGRLLAKITSRPGQCGRCDGVVLEGAELHFYQRQMAKK 202
BLAST of mRNA_M-pyrifera_M_contig11534.3193.1 vs. uniprot
Match: A0A6V2QD30_HETAK (40S ribosomal protein S8 n=2 Tax=Sar TaxID=2698737 RepID=A0A6V2QD30_HETAK) HSP 1 Score: 299 bits (765), Expect = 2.740e-96 Identity = 152/205 (74.15%), Postives = 171/205 (83.41%), Query Frame = 3
Query: 45 MGISRDSRHKRRETGGRRSKFRKKRKFEMGRPAANTKLGHKRVHPVRCRGGNMKYRALRLDTGNFSWGTEVCTRKTRILDVIYNASNNELVRTKTLVKNAIVVIDGHPFKSWYENHYGTVVGIKKGKKAPPKTDENAEAKSDHVQRKMAKRQAERTLDPLLDEQFASGRFIACISSRPGQSGRCDGYILEGKELEFYQKMLAKKK 659
MGISRDSRHKRR TGG+R++FRKKRKFE+GR +ANTKLG KRVH VRC GGN K+RA+RL+TG FSWGTE +RKT+ILDV+YNASNNELVRTKTLVK AI+ ID P + WYE HYG +G KKGKKA +E A AKS HV RK A+R RTLDPLLDEQFA+GR +A ISSRPGQSGRCDGY+LEGKELEFYQK LAKKK
Sbjct: 1 MGISRDSRHKRRHTGGKRAQFRKKRKFELGRQSANTKLGAKRVHEVRCMGGNKKFRAIRLETGTFSWGTEAISRKTKILDVVYNASNNELVRTKTLVKGAIISIDAAPLRQWYEQHYGVQIGKKKGKKAA--AEEEAVAKSSHVARKQAQRCKTRTLDPLLDEQFANGRLLASISSRPGQSGRCDGYVLEGKELEFYQKQLAKKK 203
BLAST of mRNA_M-pyrifera_M_contig11534.3193.1 vs. uniprot
Match: A0A7S2JRG2_9STRA (40S ribosomal protein S8 n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JRG2_9STRA) HSP 1 Score: 298 bits (763), Expect = 4.770e-96 Identity = 152/204 (74.51%), Postives = 170/204 (83.33%), Query Frame = 3
Query: 45 MGISRDSRHKRRETGGRRSKFRKKRKFEMGRPAANTKLGHKRVHPVRCRGGNMKYRALRLDTGNFSWGTEVCTRKTRILDVIYNASNNELVRTKTLVKNAIVVIDGHPFKSWYENHYGTVVGIKKGKKAPPKTDENAEAKSDHVQRKMAKRQAERTLDPLLDEQFASGRFIACISSRPGQSGRCDGYILEGKELEFYQKMLAKK 656
MGI+R R+KRRETGGRR+KFRKKRKFEMGRPAA TK+G KRV VRCRGGNMKYRALRLDTGNFSWGTEVCTRK RILDV YNASNNELVRTKTLVK AIV++D HPFK+WYE+HYG G++ K P DE+ KS+HVQRK+A RQ R+L+P LD Q ASGRF+A I+SRPGQSGRCDG ILEG EL FYQKM+ KK
Sbjct: 1 MGITRTGRNKRRETGGRRAKFRKKRKFEMGRPAAMTKIGEKRVREVRCRGGNMKYRALRLDTGNFSWGTEVCTRKVRILDVTYNASNNELVRTKTLVKGAIVLVDCHPFKTWYESHYGVKTGLRGAK---PPVDEDEAKKSNHVQRKLAARQKTRSLEPTLDSQLASGRFLAKITSRPGQSGRCDGVILEGPELAFYQKMMHKK 201
BLAST of mRNA_M-pyrifera_M_contig11534.3193.1 vs. uniprot
Match: B7FP80_PHATC (40S ribosomal protein S8 n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FP80_PHATC) HSP 1 Score: 295 bits (756), Expect = 6.200e-95 Identity = 146/205 (71.22%), Postives = 172/205 (83.90%), Query Frame = 3
Query: 45 MGISRDSRHKRRETGGRRSKFRKKRKFEMGRPAANTKLGHKRVHPVRCRGGNMKYRALRLDTGNFSWGTEVCTRKTRILDVIYNASNNELVRTKTLVKNAIVVIDGHPFKSWYENHYGTVVGIKK-GKKAPPKTDENAEAKSDHVQRKMAKRQAERTLDPLLDEQFASGRFIACISSRPGQSGRCDGYILEGKELEFYQKMLAKK 656
MGI+R+ RHKRRETGGRR+KFRKKRKFE+GRPAA TK+G R+HPVRCRGGNMK+RALRLD+GNFSWGTEVCTRK R+LDV YNASNNELVRTKTLVK AIV+ID HPFK+WY++HYG +G+KK G + + + KS VQ+K+ RQA R+LD +LD QFASGR +A I+SRPGQ+GRCDGYILEG EL FYQK +AKK
Sbjct: 1 MGITREGRHKRRETGGRRAKFRKKRKFELGRPAAMTKIGEPRIHPVRCRGGNMKFRALRLDSGNFSWGTEVCTRKVRVLDVTYNASNNELVRTKTLVKGAIVLIDAHPFKNWYDSHYGVTIGLKKTGGEDRTQPSVDLTEKSTQVQKKLKSRQANRSLDSVLDHQFASGRLLAKITSRPGQTGRCDGYILEGAELAFYQKQMAKK 205
BLAST of mRNA_M-pyrifera_M_contig11534.3193.1 vs. uniprot
Match: A0A6U3PIT0_9STRA (40S ribosomal protein S8 n=3 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A6U3PIT0_9STRA) HSP 1 Score: 292 bits (747), Expect = 1.180e-93 Identity = 149/204 (73.04%), Postives = 170/204 (83.33%), Query Frame = 3
Query: 45 MGISRDSRHKRRETGGRRSKFRKKRKFEMGRPAANTKLGHKRVHPVRCRGGNMKYRALRLDTGNFSWGTEVCTRKTRILDVIYNASNNELVRTKTLVKNAIVVIDGHPFKSWYENHYGTVVGIKKGKKAPPKTDENAEAKSDHVQRKMAKRQAERTLDPLLDEQFASGRFIACISSRPGQSGRCDGYILEGKELEFYQKMLAKK 656
MGI+R+ RHKRRETGGRR K+RKKRKFEMGRPAA TK+G KRVH VR RGGNMK+RALRLD+GNFSWGTEVCTRK R+LDV YNASNNELVRTKTLVK AIV+ID HPFKSWYE+HYG +G+KKG A D++ + KSDHVQRK+A RQ R L+ +D Q ASGR +A I+SRPGQSGRCDG +LEG EL FYQKM+ KK
Sbjct: 1 MGITREGRHKRRETGGRREKYRKKRKFEMGRPAAMTKIGEKRVHGVRGRGGNMKWRALRLDSGNFSWGTEVCTRKVRVLDVTYNASNNELVRTKTLVKGAIVLIDAHPFKSWYESHYGLKIGVKKGSTA---LDDDVK-KSDHVQRKLASRQKGRELEQAIDNQMASGRLLAKITSRPGQSGRCDGIVLEGAELHFYQKMMHKK 200
BLAST of mRNA_M-pyrifera_M_contig11534.3193.1 vs. uniprot
Match: A0A2D4BEG8_PYTIN (40S ribosomal protein S8 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BEG8_PYTIN) HSP 1 Score: 291 bits (746), Expect = 1.980e-93 Identity = 153/207 (73.91%), Postives = 170/207 (82.13%), Query Frame = 3
Query: 45 MGISRDSRHKRRETGGRRSKFRKKRKFEMGRPAANTKLGHKRVHPVRCRGGNMKYRALRLDTGNFSWGTEVCTRKTRILDVIYNASNNELVRTKTLVKNAIVVIDGHPFKSWYENHYGTVVGIKKGKKAPPKTDENAEAKSDHVQRKMAKRQAERTLDPLLDEQFASGRFIACISSRPGQSGRCDGYILEGKELEFYQKMLAKKKSK 665
MGISRDSRHKRRETGG+R ++RKKRKFE+GR ANTKLGHKRVH VR RGGN K+RALRLDTGNFSWGTEV +RKTRILDV+YNASNNELVRTKT+VK IV ID PF+ WYE HYG +G KK A D+ A+ KS HVQRK+A RQ +R LD LDEQFASGR +A I+SRPGQSGR DGYILEGKELEFYQ+ LA KKSK
Sbjct: 1 MGISRDSRHKRRETGGKRKQYRKKRKFELGRQPANTKLGHKRVHTVRVRGGNTKFRALRLDTGNFSWGTEVLSRKTRILDVVYNASNNELVRTKTIVKGCIVSIDATPFRQWYEAHYGAKIGQKKN--AVETADDEAK-KSSHVQRKIANRQRDRVLDVKLDEQFASGRLLAAIASRPGQSGRADGYILEGKELEFYQRKLATKKSK 204
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 372.1 |
| Seed ortholog evalue | 1.7e-100 |
| Seed eggNOG ortholog | 2880.D7FHG3 |
| Preferred name | RPS8 |
| KEGG ko | ko:K02995 |
| KEGG Pathway | ko03010,map03010 |
| KEGG Module | M00177,M00179 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000184,GO:0000313,GO:0000462,GO:0000956,GO:0002164,GO:0002181,GO:0002182,GO:0002376,GO:0002520,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005783,GO:0005829,GO:0005840,GO:0005844,GO:0005886,GO:0005911,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006414,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006996,GO:0007275,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009506,GO:0009507,GO:0009532,GO:0009536,GO:0009547,GO:0009570,GO:0009790,GO:0009791,GO:0009792,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0012505,GO:0015031,GO:0015833,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0019222,GO:0019439,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030054,GO:0030097,GO:0030312,GO:0030490,GO:0030684,GO:0030686,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033365,GO:0034470,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0035166,GO:0035167,GO:0042254,GO:0042255,GO:0042274,GO:0042788,GO:0042886,GO:0043009,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043253,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044434,GO:0044435,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045184,GO:0046483,GO:0046700,GO:0046907,GO:0048513,GO:0048519,GO:0048534,GO:0048542,GO:0048569,GO:0048731,GO:0048732,GO:0048856,GO:0050789,GO:0050794,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051726,GO:0055044,GO:0060255,GO:0065003,GO:0065007,GO:0070013,GO:0070727,GO:0070925,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0071826,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1990904 |
| EggNOG free text desc. | structural constituent of ribosome |
| EggNOG OGs | COG2007@1,KOG3283@2759 |
| COG Functional cat. | J |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | br01610,ko00000,ko00001,ko00002,ko03011 |
| Exons | 6 |
| Model size | 1527 |
| Cds size | 624 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815669.634794-UTR-M-pyrifera_M_contig11534:1342..2201 | 1622815669.634794-UTR-M-pyrifera_M_contig11534:1342..2201 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig11534 1343..2201 - |
| 1692277513.6358883-UTR-M-pyrifera_M_contig11534:1342..2201 | 1692277513.6358883-UTR-M-pyrifera_M_contig11534:1342..2201 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig11534 1343..2201 - |
| 1622815669.729311-UTR-M-pyrifera_M_contig11534:8870..8914 | 1622815669.729311-UTR-M-pyrifera_M_contig11534:8870..8914 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig11534 8871..8914 - |
| 1692277513.7174425-UTR-M-pyrifera_M_contig11534:8870..8914 | 1692277513.7174425-UTR-M-pyrifera_M_contig11534:8870..8914 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig11534 8871..8914 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815669.6529331-CDS-M-pyrifera_M_contig11534:2201..2285 | 1622815669.6529331-CDS-M-pyrifera_M_contig11534:2201..2285 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig11534 2202..2285 - |
| 1692277513.6480806-CDS-M-pyrifera_M_contig11534:2201..2285 | 1692277513.6480806-CDS-M-pyrifera_M_contig11534:2201..2285 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig11534 2202..2285 - |
| 1622815669.6703176-CDS-M-pyrifera_M_contig11534:3564..3696 | 1622815669.6703176-CDS-M-pyrifera_M_contig11534:3564..3696 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig11534 3565..3696 - |
| 1692277513.6589863-CDS-M-pyrifera_M_contig11534:3564..3696 | 1692277513.6589863-CDS-M-pyrifera_M_contig11534:3564..3696 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig11534 3565..3696 - |
| 1622815669.6867247-CDS-M-pyrifera_M_contig11534:4310..4409 | 1622815669.6867247-CDS-M-pyrifera_M_contig11534:4310..4409 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig11534 4311..4409 - |
| 1692277513.6772907-CDS-M-pyrifera_M_contig11534:4310..4409 | 1692277513.6772907-CDS-M-pyrifera_M_contig11534:4310..4409 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig11534 4311..4409 - |
| 1622815669.6984875-CDS-M-pyrifera_M_contig11534:4870..4968 | 1622815669.6984875-CDS-M-pyrifera_M_contig11534:4870..4968 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig11534 4871..4968 - |
| 1692277513.6884017-CDS-M-pyrifera_M_contig11534:4870..4968 | 1692277513.6884017-CDS-M-pyrifera_M_contig11534:4870..4968 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig11534 4871..4968 - |
| 1622815669.7089763-CDS-M-pyrifera_M_contig11534:7092..7299 | 1622815669.7089763-CDS-M-pyrifera_M_contig11534:7092..7299 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig11534 7093..7299 - |
| 1692277513.6996315-CDS-M-pyrifera_M_contig11534:7092..7299 | 1692277513.6996315-CDS-M-pyrifera_M_contig11534:7092..7299 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig11534 7093..7299 - |
| 1622815669.71914-CDS-M-pyrifera_M_contig11534:8866..8870 | 1622815669.71914-CDS-M-pyrifera_M_contig11534:8866..8870 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig11534 8867..8870 - |
| 1692277513.7094128-CDS-M-pyrifera_M_contig11534:8866..8870 | 1692277513.7094128-CDS-M-pyrifera_M_contig11534:8866..8870 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig11534 8867..8870 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11534.3193.1 >prot_M-pyrifera_M_contig11534.3193.1 ID=prot_M-pyrifera_M_contig11534.3193.1|Name=mRNA_M-pyrifera_M_contig11534.3193.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=208bp
MGISRDSRHKRRETGGRRSKFRKKRKFEMGRPAANTKLGHKRVHPVRCRG GNMKYRALRLDTGNFSWGTEVCTRKTRILDVIYNASNNELVRTKTLVKNA IVVIDGHPFKSWYENHYGTVVGIKKGKKAPPKTDENAEAKSDHVQRKMAK RQAERTLDPLLDEQFASGRFIACISSRPGQSGRCDGYILEGKELEFYQKM LAKKKSK* back to topmRNA from alignment at M-pyrifera_M_contig11534:1343..8914- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_M-pyrifera_M_contig11534.3193.1 ID=mRNA_M-pyrifera_M_contig11534.3193.1|Name=mRNA_M-pyrifera_M_contig11534.3193.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7572bp|location=Sequence derived from alignment at M-pyrifera_M_contig11534:1343..8914- (Macrocystis pyrifera P11B4 male) CCAGTTGCTCTGTCCGCGTCGACGGATCATCTCCTGGTCAAGCCATGGGT
GAGTGCCGTATTTAGGTCTATTGGAGGGGTTGGTGGTATGTGTGATGCGC
ATGGATCGTGGGAGCGCTTTGATATTTGGGGATTGGTGATTGGATTTGCG
GCCTTCAAAAAGAAAAGTTGAGGTGTTTTGGGTTCGCTGGAGCAAAGAAA
CAGGCTGGTTGCACGGCTCGCTTGGGCCTACCAGCAGCAAACGAGGTGCG
CGGCTGCCCTTGATCACGTTGACTTGCTTTGCTCTTGGAGGAAAGATGCA
GAGCGCTCGGTGAAGGTGAATGTGCCAACCTCCGGTCCTAGGGATTGCAC
GAGCTGCAGTCAGGGTCTCGCGGTCCATCGGACTTCGAAACTAGAGCCTA
AAAAGGCACACCATAGACACGTGACGATGGTGGCTGTGGTGGCTGCAGCA
GTGGCGGTGATCAACCTACCCAGCTTCGCCCTCGAGCGCCTGACTCACAC
CAGCATCGAGCTCTAGGTTGTCTTTCCTTGTCGTTGAGTTGCGCACTTTG
TCCTCATCTGCTGCATTCTGGCTGTCTTCTTTAATGCCATCCTAGAGAAT
CGACGTACTAATGCCCTTCACCAGTGAGACGAGTAGGTGCTTGTTCCGTG
AGTACTCGTACTCGGTTCCATTCCTTTGTCTCTTCCACACACACTCACTT
CGGTATACCCTCGGTATACCTGGTTTGTGAAAAATATGGTACACCTGGTA
CATCAGAGAGTAACAGGGCAGTACGATACTTCAAGTTTTCCGACACATGT
CTATCTCGTGCACCAACAGCTGATAAATTGCTAATGTCTAGGAGCTGCTT
ATCTGGGAGACGCGTACGCTGGAGCATTGCTTATACTCGTACGTGTAAAA
CCAGCGTTCGTAGCGACGCGATGAGTACGGCAGACCGATACTGCTGTACG
TACGCAGCACATCTCTGCAGTACGTTTCTTCTCATGGCGGGAGCAAGTGT
GCACTGCTGTTACATGTACACGCTTTGTACGAGGTACCTGGTGCCACGGG
CACACGACGCCGAGGGCAAACACTTCAATGCTCGTTTGTAAACTTGCGGC
GATATCATTGTCCTATGTTAGTTTACAAGTAGCCGATTGAGAGCACAAAC
CAAAGTACACCGCCGCGAAGGTGGAGGGAACCAAACCCGTAAGCCCACCG
GTTCATGACCCATACTGGTACCAAGTACAACTCCGTATGATAGTCGTAAA
TATCTCAAAACAACAGTCCCAGCAGAAGCCGAACCACCCTCCTTCCTCCC
CCCGTTTTGCCGCCACCACCCGCCGGTTTAGCGGGTCCCACCCAGCCCCT
TTCAAAGGCTGAATTGTGAGCAAACGTGACTGCCAGTACCGCACCCATCC
CCCGCTCTCGTATGATACCATGATGCCCTCCTTTACAACAAACGCCATGT
GTGAGGACGAATTGCTGTTTCATGATGCCTGCTGAGTTCCGAGTTGGACG
AGGTTTACAGGGTGTATAGCGCAGGAAGGAGACCAAAAAGTCGTCGTATT
ATAGCACGGACACACTTGAAGTACAGTACATGTGACCCCCACCCCACCAT
CCCGTGCTAATGCAGGTATCTCTAGGGACTCGCGGCACAAGCGCCGTGAA
ACGGGCGGAAGGCGCTCCAAGTTCAGGAAGAAGAGGAAGTTCGAGATGGG
CAGGCCCGCGGCCAACACCAAGCTCGGCCACAAGCGTGTGCACCCCGTGC
GTTGCCGCGGCGGCAACATGAAGTACCGCGCGCTCAGGCTCGACACTGGC
AACTTCAGCTGGGGCACTGAGGGTGAGAGATGGTTTCTGTCATCTTAACG
CCTGATACACTTGAAACCCCACAAGTCGTCGCCTTGTTGAGTCAACTCTT
TTCTTGATAGTACTGCAATATCCTGAACGGGTTCGGTTGACGTTCTGGGT
TTGCCTGGTTAAGGCGTGTTCGGACTTTGTGTAGATGTGTGGTCTACTGC
TGTGTACCAGTTCCAGTACGGAAAAGTTCCACCCACCGCCGCGCGGCAGC
TGACTGAAGTACCCCGCGTTAGGCTCGACAACCTTCAAGTTGAGGATGAG
GGGTGTTTTTTTGTCGATATAATAATGCCCTTGTACATACCTGAAACCCC
AATCTGAGGAGCTGTGAATCGATACGACTTATACAAAGTCACCAACTGCG
TTGGTATGTGGTTCCATGGACCTGCTGACTATCCGACCTATTGGGTTTCC
ATACTCGTAGGAAGGATTGTTGAACAATGCCTTTGTTCTGCTCTAGGTGG
AGCCCTCCTCTGCTGGGGAAAGGTTGATGTAGCTCGGTTCGCTCGCCTCA
CTTGGAGTCGGCTGGCCATCAGCTGGCTTCGCCGGCCGACTTGCCGACTA
CAGTCGGTTAGTTGGCTAACGGGGCACCTACTGATCAACTAGTAGTCGTG
AAATCCTGCCGACGCACAGATGTACCGATCTGTCCTTCGTTTACCGTAAT
CCGTTGCCAGTGTCTAGCTGTGGCCCCCCATGCTCTACGTTGTACCTGGT
ACGAGGCCTACAGCCGTGTACGTCTTCATTATCCTTTTTTATTTTGCTGT
AGCTGAGTGGTATACAGGAGGTACCTGTGGTATTTGCGACAGCGGTAGTG
AGTGAGATTGTGCATGACGGTGAGAATGAGAGACGCGTGCTCCTCTCTCA
GCTGGAACCATCCTGGATGGTATCATACCAGCAAGGGAAAATGTGTACCT
GGTAAAATTTGAAAATGATAACACCGAAACAGCAGAACCGGTATGGTTCT
GCTTATCTTGGCACAGGGGGGCGATTACGCAAAAAAAAGGTCATGCTCAA
ACCGCGAGATGCCCAGCGGTATCAAAGGTTGAAGAGGGTCGAGTTGTGTC
CCGCAAGTGCCATTTTGGTTTTTAGTCGACGTAACTAACGTGTAACGATT
TTTCCGCGCAGCACTCGCCCCAAGACGTTTCTTGATTCATGCGCAATGGC
GGTGGTAATATACTATTAAACAGAGTATTAACAGTCTCAACAGTTTCGTG
GCAACTACAATTGATTCGCTCGCAAAGCAACATGCAGAAGAAACAAGGGC
AATACCGGACGAAATATCCTGCGCGAAAGCAGCAGAACATGCTGGACCCA
AAGATCGGCGAATCTTGTCTGGGAATAGGCCTGACAACCTGAAGCCCGTC
CCGAATCAGAGATGTATGTATCTGGCATACACTGTTGTTGCGTGGGACAG
GTAGACTAACTAACCCGAGACTGAAGTTCTCTAACCCATCATGCGTGTAA
CAGCGTAGTACGTCACAGCACGCCGCTCGTGTTATGCCCTTCTCGAGGCG
TTGAACCCCTTCGTTTCAGGACGAACTCTTTGTAAACTCTGTTGTTTTCT
AGCTACCCATGTCGGTGTGGCCGAGAGCACGTTTGTCGAACTTGCACGCA
GCCAGATCATGTGACATAGGATGGCTTTCTTCGATTTTACCGGCGAGCGT
GTCGTGTCAGGCCTTTTGGCTAGGAGGCGTTTTTCGTTCACCAACTGTGT
GAAAAGGCCAGAATGCGGTACATTTTGCTCGCGTTACGAAAGTGCTGGAA
TGTTTTCACACTTTTCCTTCATGTTTTCGTAGGCAGGAGGCGTTTTTTCA
CGCACTACAAGTGTGAAGGAAAGGATCCTGCGTAAGTTTTGCTAACGTCA
AGGTGTCGAATATTTTTGTCGTTTATCTCCCTCTCGTGTTTTTTGTTGGC
AGGGGTCGGGTTTTTTTTTTTACCCACTGTGTGAAGGACAGCATTCTGTA
CATTCTTGTCGCGCTGAGAAGTTCCACTGTTTCAATTAGCTTCCCCTCAA
GTGTTTTTTCTCGAGATGTACGTTTTGCTGGCGTTCATCAAGTGTCTATT
CAATATTTCAATGTTTCTCCTTTTTTTGTGTGTGTTTTTTTTACAGTGTG
CACCCGTAAGACGCGTATCCTCGACGTGATCTACAACGCCAGCAACAACG
AGCTGGTCCGCACCAAGACCCTTGTGAAGAACGCCATCGTCGTGGTAAGT
GGAAACCCCGCTCGCTCGCTTTCGTGTTGTATTCCGCACGTTCGGCATAT
TATGAAGAAAAGACGGGCCGACGCTCAATATTTTTAGTGTTGGATTACCT
TGTATATGTAACACGCAAGATAACACAACTCCTGCGACGAATTTCAAAGC
CGATTTTCTCCAAAACGGGCACACGACGAAAATGGTGGCGTTGGACACCT
CTAAATATTTCCGTAGATCGTGATTTGCACGACGGGTTGGGGAACCTTTA
CGGCTGGACTCCCGTGTTTTTGCCGTCAAATCTACATACCTGGTTATGTG
GTAGTTGCTGCTATCGCGGTGATGAAGTTTCGCATATAATACGCTTCTCA
ATTTCTTGAAATCTTGGTGCGGCGTACGTACGTACGGTGTTCTGAGATGT
GCGTGTGCGTGTCATGAGTCTGGAACTAACTCCCGTCCGTCCCATCGTCT
TGCAGATCGACGGCCACCCTTTCAAGTCTTGGTACGAGAACCACTATGGT
ACCGTCGTGGGTATCAAGAAGGGAAAGAAGGCTCCCCCTAAGACCGACGA
GAATGTGAGGGAATTTGCCCCAGCAGCGCGCGCATGGATGGGGCTTTGGG
CTTTTAGTCGAGAGAATTCGGGTTGCTGATGAACTTGACAGCCGGCAAAA
GACGTACCGTAGGGTATTGTGGTACATCGTACAAGTACCGTTGAGAGCGG
GAACTGATGATGGGCGGCTACGTAGGCGAAATTGGTTTTTTGTTGCATCT
TTCGTTTGGTGGCCACTTCGACGGTCGGACAGGACTTCGGTATTTTGTGT
ATGTACCAGGCCGGGTCGGTTGCGAGACAAAGAAAAAGTACCTGGTACAC
TGCAGGTGTACGTAGCGACTATGTATTTAGTGTACCCACCTTCCTTCTGT
TTCGTGGTGCACTCGTGGTCACTTTTAGCAGCAGGGAGGGACTGCGCCGT
TTGTCTTTCAGGCCGGGTCTGTTCGCGTGATGCGAACCAAACACCATTGT
GACCACTACAACCGAAAATATAGGGACCGTATAAGGACCGTTTAAACATC
AATATGAAGACCAAGCGGTCATTCTTGTAGCGACTGGTATCGGGCATTTC
TTTAGCTGGTATATTTTATGTAGCCACATTTCCACACGGGCTCTTGTGGT
GATGATGTTCCATTTCAGGCCGAGGCTAAGTCCGACCACGTGCAGCGCAA
GATGGCCAAGCGCCAGGCGGAACGCACGCTGGACCCCCTCCTCGACGAGC
AGTTCGCGTCGGGCCGCTTCATCGCCTGCATCTCTTCCCGCCCCGGCCAG
GTAAAAAAAAAAAACTGACACTCACATTTTTTTTCAATATATTTCATGTC
CTGTTGCTCCCCGTGAGCTACGATACAACATACAGACGAATGTTTTTCGA
ACAGCTCTCCGCGGGATAGGTCACCCATGTAACGGTCAAATTTTGTAAAC
CACTTGAAAACCTACCCCCCCTCCCTCCCATAAGACGCTTTGATCGCAGT
GTCACTGTGTAGATCACACCAAGCTCTCAGTAGGGAATGGGGGGGATTGT
CCGTTGTCCGTATCACAGGTTAGGTTTTGCAATATAAAATATACCAGGTA
CAAAGTAGAGAACAGACAAATCTTGCCTTCGAGACCAGACAGTGTTGCTC
CCGTTTTGAGATGCTCTCCCCGTGAGCCATATTGTCGTCCGGTCTTGGAG
AGAAGCTATGTCTGGGCGAACTATACGTAAGTTTATTTTTTCATTGCAAG
GCCTACTCTAAGGTGTGATATCGACATTTCCTCCAAACTCATCACGTTGC
GAGCTTGGTGTGATGATAAGGGGGGCAGGTTTTTCAAGTGGTCTACCAAA
TCTTACCGTTACACATGTGACGTATTCCGCGGAGAGATGTCCGTAGAAGC
TTTGCCTGTCTGTTTCATCATATATGTGACCATGACGCGAGGAGCTGTGG
AGGGGACTTTCTTTAGACGTGCATTGCGTTGTTTATATATATATATATAT
ATATACCTACGCGTCAGCGTATTGTCAAAAAACGAGATACTATTGATATG
TTTATTCACTTGCGTTATGCTTTTCAATCTTGTGCCTGTCTTGACTTGTT
TAGAACTGCACCACGTAATTGTCCATTATGTGTGCAAACGCCCGCGCATG
CTGCTTAGCCTCGAGTACAAAACTTGCCTACCAACCAACTCACCACCCAC
CCCCCCAGATTTTTTCAACTTGAAATTGGTCGATCAATAAATTGGGGGAC
GCGACGCAACTCGGCGTAGGCATCATGTCGTTTTTTCTCTTTTTTCTTCT
TGCGAAGACGTTGTTTTCCTTCTTCTGATTAGTAGCTGGACGTCCCGGAG
ATTGTGTATCGAGTAAAATGTTGCTCGTTATTTCTATGGTGTCTGGTTTT
TTCAGTCAGCTTTTCCTTCGTTTGTACACTAAAAATCATTGTTTCTGTAA
GAATGCCATAATTTGAATAGTTTCGTGCCGAATCGTCAGGATGCGGTTCG
AAATGGGGATTATAAACAAATCCCGCCCGCCAATTTAACGCTCTTCTTAC
AACGGTTTCTCATTGACGTTTGTTTACAGTCTGGCCGCTGCGACGGCTAC
ATCCTCGAGGGCAAGGAGCTAGAATTCTACCAGAAGATGCTCGCCAAGAA
GAAGTCCAAGTAAACGTCGCTGGGTAGCTAGCTCCTTCGGCGATCACGCA
ACGACGTCCGGGCTCTCTCTCGTCCCTTGTGACGACGTCCTCCCTCCCTT
GCGCTCTTCGAAGCTTTCGGCAGGGGGTAGGAATGGGCAGTGTTGCGGTA
GTTTTGTGAGCCGGGGCAGGACACGGAGCGCGGATTTGCCTTTCGTTCCA
ACGAAGTGGGGGCGTTTTTTGCACCCTTTAGTGTGCGACAATCCCGCCTC
TTTTTTCGGCAGGGTGTTTCGAAACCGTCTTCGCCTGTGTGCGATGGTTG
GAAGGGGTGTTACAGCAGGCGCGTGGGTGGCTTGTGGCGTCGTTTTGCGT
GCTTTCGGGCGATGAGGACAAATGGCAGGGCAACTAAATAAAAAAACCGG
GAAAAATAATACGTCTCTCGTGTGTTGCTGGGGCTTGGGGACACCGTGCC
AAGCGCTACGAAAAGGCGCGCGCGCACACATGCAGGCAGCTGGGCCTTGA
TGCAATCGTTTGCCCAGCAACCGGCTGTGAAATTACGATTTTTTTTTTTG
AAATTGGGACCGTTTCTACCGTCAAGAGCCGCCCGCATCAGCTCTCCACC
TTTTTTCACCACCGTACCACGAGTAAATGTTTTCCAGGTAACTCGCTACC
AGTTGTGATATCCGACATGCCGTATTTCAATCAGCACATGGATCACGTTT
CGTTGAAATAGTGTCAAGACTGGTGCAGTCGAGAGAACAATGTATCGATG
CAAAAAGCTGCCGCTGCCACTGGCGGGGCTTATGCTGTTTTGGGGCGATG
CCGGGATGCTCCAAGCCCTTCCATGATACACCATGCATGGTCGGTTGTTG
ACCCCTGCGTAAATTTGTTTGG back to topCoding sequence (CDS) from alignment at M-pyrifera_M_contig11534:1343..8914- >mRNA_M-pyrifera_M_contig11534.3193.1 ID=mRNA_M-pyrifera_M_contig11534.3193.1|Name=mRNA_M-pyrifera_M_contig11534.3193.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1248bp|location=Sequence derived from alignment at M-pyrifera_M_contig11534:1343..8914- (Macrocystis pyrifera P11B4 male) ATGGATGGGTATCTCTAGGGACTCGCGGCACAAGCGCCGTGAAACGGGCG GAAGGCGCTCCAAGTTCAGGAAGAAGAGGAAGTTCGAGATGGGCAGGCCC GCGGCCAACACCAAGCTCGGCCACAAGCGTGTGCACCCCGTGCGTTGCCG CGGCGGCAACATGAAGTACCGCGCGCTCAGGCTCGACACTGGCAACTTCA GCTGGGGCACTGAGGGTATCTCTAGGGACTCGCGGCACAAGCGCCGTGAA ACGGGCGGAAGGCGCTCCAAGTTCAGGAAGAAGAGGAAGTTCGAGATGGG CAGGCCCGCGGCCAACACCAAGCTCGGCCACAAGCGTGTGCACCCCGTGC GTTGCCGCGGCGGCAACATGAAGTACCGCGCGCTCAGGCTCGACACTGGC AACTTCAGCTGGGGCACTGAGGTGTGCACCCGTAAGACGCGTATCCTCGA CGTGATCTACAACGCCAGCAACAACGAGCTGGTCCGCACCAAGACCCTTG TGAAGAACGCCATCGTCGTGTGTGCACCCGTAAGACGCGTATCCTCGACG TGATCTACAACGCCAGCAACAACGAGCTGGTCCGCACCAAGACCCTTGTG AAGAACGCCATCGTCGTGATCGACGGCCACCCTTTCAAGTCTTGGTACGA GAACCACTATGGTACCGTCGTGGGTATCAAGAAGGGAAAGAAGGCTCCCC CTAAGACCGACGAGAATATCGACGGCCACCCTTTCAAGTCTTGGTACGAG AACCACTATGGTACCGTCGTGGGTATCAAGAAGGGAAAGAAGGCTCCCCC TAAGACCGACGAGAATGCCGAGGCTAAGTCCGACCACGTGCAGCGCAAGA TGGCCAAGCGCCAGGCGGAACGCACGCTGGACCCCCTCCTCGACGAGCAG TTCGCGTCGGGCCGCTTCATCGCCTGCATCTCTTCCCGCCCCGGCCAGGC CGAGGCTAAGTCCGACCACGTGCAGCGCAAGATGGCCAAGCGCCAGGCGG AACGCACGCTGGACCCCCTCCTCGACGAGCAGTTCGCGTCGGGCCGCTTC ATCGCCTGCATCTCTTCCCGCCCCGGCCAGTCTGGCCGCTGCGACGGCTA CATCCTCGAGGGCAAGGAGCTAGAATTCTACCAGAAGATGCTCGCCAAGA AGAAGTCCAAGTAATCTGGCCGCTGCGACGGCTACATCCTCGAGGGCAAG GAGCTAGAATTCTACCAGAAGATGCTCGCCAAGAAGAAGTCCAAGTAA back to top
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