mRNA_M-pyrifera_M_contig115317.3187.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig115317.3187.1 vs. uniprot
Match: A0A6B1B2X3_9ACTN (S-layer homology domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1B2X3_9ACTN) HSP 1 Score: 251 bits (642), Expect = 8.110e-80 Identity = 115/177 (64.97%), Postives = 131/177 (74.01%), Query Frame = 1
Query: 1 CGNRAVACTRFRYGQCNQHVPCVGPIACRIVTCVVPWQWDASCDDTPATDNYTRFHDRACLHDGFTDLAPDAYYTEAVEWAVEAGIAKGYNSDIFGPGELAPRSHMATFIWRHQGSPIVEESSPFTDVPADIWFTDAVNWMAAEGITTGTAADKFSPNQLVTRGEAITFLWRLAGAP 531
C +R+V CTRFRYGQCNQ + CVGPIACRIVTCV PW WD SCD+TPATDN T FHDR CLHDGFTDLAP+AYY EAVEWA + GI GY+SDIFGP E R H A F+WR+QG P S+ F D+P W+ AVNWM GITTGT F P+ VTRG+A+TFLWR+ G P
Sbjct: 145 CDSRSVDCTRFRYGQCNQDIACVGPIACRIVTCVPPWLWDGSCDETPATDNSTGFHDRPCLHDGFTDLAPNAYYVEAVEWAYKQGITTGYSSDIFGPQEPVLRWHAAAFLWRYQGEPEPLVSAHFKDIPG-YWYAPAVNWMVEAGITTGTEDRLFEPDAPVTRGQAVTFLWRMRGRP 320
BLAST of mRNA_M-pyrifera_M_contig115317.3187.1 vs. uniprot
Match: A0A2E0T1D6_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0T1D6_9ACTN) HSP 1 Score: 242 bits (618), Expect = 8.240e-77 Identity = 108/178 (60.67%), Postives = 131/178 (73.60%), Query Frame = 1
Query: 1 CGNRAVACTRFRYGQCNQHVPCVGPIACRIVTCVVPWQWDASCDDTPATDNYTRFHDRACLHDGFTDLAPDAYYTEAVEWAVEAGIAKGYNSDIFGPGELAPRSHMATFIWRHQGSPIVEESSPFTDVPADIWFTDAVNWMAAEGITTGTAADKFSPNQLVTRGEAITFLWRLAGAPA 534
C +RA+ CTRFRYGQCNQHVPC+GPIACRIVTCV PW WD SC ATDN T HDR CLH+GFTD+APD++YTE V W E GI G+ +D+FGP ELA R+H+A F+WR+ G P S F+DV AD ++ AV WM+ + IT GT+A FSP++ VTR EAIT LWR AG P+
Sbjct: 113 CHSRAIDCTRFRYGQCNQHVPCLGPIACRIVTCVPPWDWDHSCTTEVATDNQTALHDRPCLHEGFTDVAPDSWYTEPVLWMAEQGITTGFTADLFGPRELATRAHIAAFLWRYFGRPTAAAQSVFSDVSADAYYGPAVAWMSEKNITRGTSASTFSPDREVTRAEAITLLWRAAGRPS 290
BLAST of mRNA_M-pyrifera_M_contig115317.3187.1 vs. uniprot
Match: A0A358A1T9_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A358A1T9_9ACTN) HSP 1 Score: 239 bits (611), Expect = 4.480e-76 Identity = 109/177 (61.58%), Postives = 129/177 (72.88%), Query Frame = 1
Query: 1 CGNRAVACTRFRYGQCNQHVPCVGPIACRIVTCVVPWQWDASCDDTPATDNYTRFHDRACLHDGFTDLAPDAYYTEAVEWAVEAGIAKGYNSDIFGPGELAPRSHMATFIWRHQGSPIVEESSPFTDVPADIWFTDAVNWMAAEGITTGTAADKFSPNQLVTRGEAITFLWRLAGAP 531
C +RAV CTRFRYGQCNQ VPC+GPIACRIVTCV PW WD SC ATDN T HDR CLH GFTD+APD++YTE V W E GI G+ +D+FGP ELA R+H+A F+WR+ G PI S F+DV AD ++ AV WM+ + IT GT+A FSP++ VTR EAIT LWR AG P
Sbjct: 145 CHSRAVDCTRFRYGQCNQDVPCLGPIACRIVTCVPPWDWDHSCTTEVATDNQTALHDRPCLHQGFTDVAPDSWYTEPVLWMAEQGITTGFTADLFGPRELATRAHIAAFLWRYFGRPIAAVRSVFSDVSADAYYGPAVAWMSEQNITRGTSASTFSPDREVTRAEAITLLWRAAGRP 321
BLAST of mRNA_M-pyrifera_M_contig115317.3187.1 vs. uniprot
Match: A0A3M2GVL6_ACTSX (Uncharacterized protein n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GVL6_ACTSX) HSP 1 Score: 215 bits (548), Expect = 5.300e-66 Identity = 97/177 (54.80%), Postives = 117/177 (66.10%), Query Frame = 1
Query: 1 CGNRAVACTRFRYGQCNQHVPCVGPIACRIVTCVVPWQWDASCDDTPATDNYTRFHDRACLHDGFTDLAPDAYYTEAVEWAVEAGIAKGYNSDIFGPGELAPRSHMATFIWRHQGSPIVEESSPFTDVPADIWFTDAVNWMAAEGITTGTAADKFSPNQLVTRGEAITFLWRLAGAP 531
C NR + C RFRYGQCNQ +PCVGPI CRIVTCV PW WD SC ATDN TRFHDRACLH+GFTD+APDA+YT AV W E GI G++ D+FGP E A R+ + TF+WR+ G P E +PF DV + AV W A G+TTG F+P++ R E + L R G+P
Sbjct: 137 CNNRQIDCVRFRYGQCNQDIPCVGPIRCRIVTCVPPWVWDPSCTTAVATDNGTRFHDRACLHEGFTDVAPDAWYTGAVLWMAERGITTGFDDDLFGPTEPATRAQLVTFLWRYAGRPEPAEPAPFDDVDPGRYHARAVAWAAESGLTTGVGDGLFAPDRSAGRAEVVAMLHRWVGSP 313
BLAST of mRNA_M-pyrifera_M_contig115317.3187.1 vs. uniprot
Match: A0A7K2APR4_9ACTN (S-layer homology domain-containing protein n=3 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2APR4_9ACTN) HSP 1 Score: 204 bits (519), Expect = 1.480e-61 Identity = 95/178 (53.37%), Postives = 117/178 (65.73%), Query Frame = 1
Query: 1 CGNRAVACTRFRYGQCNQHVPCVGPIACRIVTCVVPWQWDASCDDTPAT-DNYTRFHDRACLHDGFTDLAPDAYYTEAVEWAVEAGIAKGYNSDIFGPGELAPRSHMATFIWRHQGSPIVEESSPFTDVPADIWFTDAVNWMAAEGITTGTAADKFSPNQLVTRGEAITFLWRLAGAP 531
C R CTRFRYGQCNQ V CVGP+ CRIVTCV PW WD +C +P D TR+HDR CLH+GF D+ P AYY EAV+W + GI G SD+FGP E R ATF+WR++ P E S+ F DV AD +++ AV WM + ITTG ++F PN V+R E+I F+ RLAG P
Sbjct: 145 CDTRKSECTRFRYGQCNQDV-CVGPLKCRIVTCVPPWTWDPACATSPVLYDPGTRWHDRPCLHEGFNDVPPRAYYAEAVKWMADEGITTGMKSDLFGPDEPVTRGQFATFLWRYEDQPAAEPSNEFDDVAADAFYSQAVAWMVEQRITTGRTRNRFDPNSGVSRAESIVFVHRLAGEP 321
BLAST of mRNA_M-pyrifera_M_contig115317.3187.1 vs. uniprot
Match: A0A7K2ANP0_9ACTN (S-layer homology domain-containing protein n=3 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2ANP0_9ACTN) HSP 1 Score: 203 bits (516), Expect = 4.290e-61 Identity = 95/178 (53.37%), Postives = 117/178 (65.73%), Query Frame = 1
Query: 1 CGNRAVACTRFRYGQCNQHVPCVGPIACRIVTCVVPWQWDASCDDTPAT-DNYTRFHDRACLHDGFTDLAPDAYYTEAVEWAVEAGIAKGYNSDIFGPGELAPRSHMATFIWRHQGSPIVEESSPFTDVPADIWFTDAVNWMAAEGITTGTAADKFSPNQLVTRGEAITFLWRLAGAP 531
C R CTRFRYGQCNQ V CVG + CRIVTCV PW WD +C +P D TR+HDR CLH+GF D+ P AYY +AV+W + GI G SD+FGP EL R+ ATF+WR++G P VE S+ F DV ++ AV WM + ITTG ++F PN V+R E+I FL RLAG P
Sbjct: 146 CDTRKSECTRFRYGQCNQDV-CVGQLMCRIVTCVPPWTWDPACATSPVLYDPGTRWHDRPCLHEGFNDVPPRAYYADAVKWMADEGITTGMKSDLFGPDELVNRAQFATFLWRYEGQPQVEPSNKFNDVETSAFYARAVAWMVEQRITTGRTLNRFDPNSNVSRAESIVFLHRLAGEP 322
BLAST of mRNA_M-pyrifera_M_contig115317.3187.1 vs. uniprot
Match: A0A6B1E5I3_9ACTN (S-layer homology domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1E5I3_9ACTN) HSP 1 Score: 201 bits (511), Expect = 3.430e-60 Identity = 92/178 (51.69%), Postives = 113/178 (63.48%), Query Frame = 1
Query: 1 CGNRAVACTRFRYGQCNQHVPCVGPIACRIVTCVVPWQWDASCDDTPAT-DNYTRFHDRACLHDGFTDLAPDAYYTEAVEWAVEAGIAKGYNSDIFGPGELAPRSHMATFIWRHQGSPIVEESSPFTDVPADIWFTDAVNWMAAEGITTGTAADKFSPNQLVTRGEAITFLWRLAGAP 531
C R CTRFRYGQCNQ + CVGP+ CRIVTCV PW+WD +C +P TRFHDR CLHDGFTD+ P A Y AVEW GIA G+ D+FGP EL R +TF+WR+ G P+ +S F DV ++ AV WM IT G A +F P+ V+R +A+ FL RLAG+P
Sbjct: 144 CDTRKSECTRFRYGQCNQDL-CVGPLKCRIVTCVPPWKWDPACATSPVLYSQSTRFHDRPCLHDGFTDIPPKALYAGAVEWMASEGIAVGFTDDLFGPDELVSRGQFSTFLWRYSGEPLALDSDGFDDVDPSAYYAHAVAWMVENAITAGRAPGRFDPSSNVSRAQAVVFLHRLAGSP 320
BLAST of mRNA_M-pyrifera_M_contig115317.3187.1 vs. uniprot
Match: A0A7K2BRK2_9ACTN (S-layer homology domain-containing protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2BRK2_9ACTN) HSP 1 Score: 200 bits (508), Expect = 6.600e-60 Identity = 94/178 (52.81%), Postives = 116/178 (65.17%), Query Frame = 1
Query: 1 CGNRAVACTRFRYGQCNQHVPCVGPIACRIVTCVVPWQWDASCDDTPAT-DNYTRFHDRACLHDGFTDLAPDAYYTEAVEWAVEAGIAKGYNSDIFGPGELAPRSHMATFIWRHQGSPIVEESSPFTDVPADIWFTDAVNWMAAEGITTGTAADKFSPNQLVTRGEAITFLWRLAGAP 531
C R CTRFRYGQCNQ + CVGP+ CRIVTCV PW WD +C +P D TR+HDR CLH+GF D+ P AYY EAV+W + GI G SD+FGP E R ATF+WR++G P VE S F DV +++ AV WM + ITTG D+F P+ V+R E+I F+ RLAG P
Sbjct: 145 CDARKSECTRFRYGQCNQDL-CVGPLKCRIVTCVPPWTWDPACATSPVLYDPGTRWHDRPCLHEGFNDVPPRAYYAEAVKWMADEGITTGLKSDLFGPDEPVTRGQFATFLWRYEGRPQVEPSDTFDDVGVSDFYSQAVAWMVEQRITTGRTRDRFDPSSGVSRAESIVFVHRLAGEP 321
BLAST of mRNA_M-pyrifera_M_contig115317.3187.1 vs. uniprot
Match: A0A6N9EQ55_9ACTN (S-layer homology domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N9EQ55_9ACTN) HSP 1 Score: 196 bits (497), Expect = 6.140e-58 Identity = 92/178 (51.69%), Postives = 110/178 (61.80%), Query Frame = 1
Query: 1 CGNRAVACTRFRYGQCNQHVPCVGPIACRIVTCVVPWQWDASCDDTPAT-DNYTRFHDRACLHDGFTDLAPDAYYTEAVEWAVEAGIAKGYNSDIFGPGELAPRSHMATFIWRHQGSPIVEESSPFTDVPADIWFTDAVNWMAAEGITTGTAADKFSPNQLVTRGEAITFLWRLAGAP 531
C R CTRFRYGQCNQ + CVGP+ CRIVTCV PW+WD +C +P TR+HDR CLHDGFTD+ P A Y AVEW GIA G+ D+FGP EL R+ ATF+W ++G P S F DV ++ DAV WM GIT G KF P V+R ++I FL LAG P
Sbjct: 144 CDTRKSECTRFRYGQCNQDL-CVGPLHCRIVTCVPPWKWDPACASSPVLYSQSTRWHDRPCLHDGFTDIPPKALYASAVEWMASEGIAAGFTDDLFGPDELVTRAQFATFLWLYEGKPPALHSDGFDDVDPGAYYADAVAWMVQNGITAGRGPRKFDPLSNVSRAQSIVFLHALAGKP 320
BLAST of mRNA_M-pyrifera_M_contig115317.3187.1 vs. uniprot
Match: A0A6B0ZJ92_9ACTN (S-layer homology domain-containing protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B0ZJ92_9ACTN) HSP 1 Score: 185 bits (469), Expect = 1.050e-53 Identity = 85/150 (56.67%), Postives = 101/150 (67.33%), Query Frame = 1
Query: 1 CGNRAVACTRFRYGQCNQHVPCVGPIACRIVTCVVPWQWDASCDDTPAT-DNYTRFHDRACLHDGFTDLAPDAYYTEAVEWAVEAGIAKGYNSDIFGPGELAPRSHMATFIWRHQGSPIVEESSPFTDVPADIWFTDAVNWMAAEGITTG 447
C R CTRFRYGQCNQ V CVGP+ CRIVTCV PW WD +C +P D TR+HDR CLHDGF D+ P AYY EAVEW + GI G D+FGP E R+ ATF+WR++G P VE S+ F DVP D +++ AV WM + ITTG
Sbjct: 277 CDTRKSECTRFRYGQCNQDV-CVGPLKCRIVTCVPPWTWDPACATSPVLYDPGTRWHDRPCLHDGFNDVPPRAYYAEAVEWMADEGITTGMKDDLFGPDEPVNRAQFATFLWRYEGRPRVEPSNKFNDVPEDAFYSQAVAWMVEQRITTG 425 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115317.3187.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig115317.3187.1 >prot_M-pyrifera_M_contig115317.3187.1 ID=prot_M-pyrifera_M_contig115317.3187.1|Name=mRNA_M-pyrifera_M_contig115317.3187.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=178bp CGNRAVACTRFRYGQCNQHVPCVGPIACRIVTCVVPWQWDASCDDTPATDback to top mRNA from alignment at M-pyrifera_M_contig115317:15..548+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig115317.3187.1 ID=mRNA_M-pyrifera_M_contig115317.3187.1|Name=mRNA_M-pyrifera_M_contig115317.3187.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=534bp|location=Sequence derived from alignment at M-pyrifera_M_contig115317:15..548+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig115317:15..548+ >mRNA_M-pyrifera_M_contig115317.3187.1 ID=mRNA_M-pyrifera_M_contig115317.3187.1|Name=mRNA_M-pyrifera_M_contig115317.3187.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1068bp|location=Sequence derived from alignment at M-pyrifera_M_contig115317:15..548+ (Macrocystis pyrifera P11B4 male)back to top |