mRNA_M-pyrifera_M_contig11527.3172.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11527.3172.1 vs. uniprot
Match: D7FT23_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT23_ECTSI) HSP 1 Score: 986 bits (2548), Expect = 0.000e+0 Identity = 744/1506 (49.40%), Postives = 866/1506 (57.50%), Query Frame = 1
Query: 16 QQYLECEHAQLIFGEGGTRAVSYPVWKLCALLSLPRFGALQGRLVAHVGLLASLWLPRDASALIDFFQDSVELLQDTRGSFPSSRQGTRTSPPRHRAALERPPLPPPGIHDYYRRETWRATASGTHAYAQLWSLLGCQLDTALRPGTEALHQVSLEALVSLLEEEPPVGVMPQLGITCLRLAGRALLLR-GRKGEQH------EDPRARVSATSRILAIQGLTARCIRLIFPASCSSPQVKAAVAAAGEASPTCQ---------------LSAVDASAAPSGSLSSAIPNASNLTPPIATASLASLSAVLPCIVRWWAGCQQPIGGDGVESRSAPASLGPDGGAGGVGSEWNTEAVSLARAVAAAYASAVEGSQQLSPAEK--NLVPASAVAGSEKKNTPRGKRAR-------------GQAATTAAAAAH------------VPKRFASAVSALSSVPCVQPELMRALRAVLERFPRISIAVLRRAELADG-NPRGGGLAVSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR--RVTLEPAGLRAAAAGGDSCGDLQEALTAPRGSEREGELRGGGGGS--------RVRGLAGTPLVGQER---PTVFSGDSAALEAIDAVLARADAALGFFEAGGAACVGTGRG-GDGSDGESETSDGDRSDASKE----YGSSTGYLHLVLQHTTSVTCALRMLAPFVDRAWLTPPP-GDDEAGRRLEFGGSCYKRGSAA---AMLRTGDLSTRVKEISEGEEWPSLIGRLVDGFAAAVRVTARYKADGSDG----RHESGASAADRPPSTRAPRTIALLLDMVVNCAAEIPTALLDH--PAREKRGNDGG--GYGVRGE-PQANLAAAIGFAAGKALEVIISPGSAVLDAARDGGIRDRLRNRLPGTVLGPSIASAPFPLKCFLLAAAFER-ERTREEGVDQDTAGMGREQGRRKPG--------GXXXXXXXXXXXXXXXXXXXXXXXXXXFSSGGPGDSAYLEHDPAVSVEEAFLAGLRHDGSALVVQCAVAALPMMSLCSTNGG-CCSNSSSGGV---TEHVEFCDWRTRWLPALMSLSEE--HGGSEGVRLELAAALLRLGSSLDSPRS----ATTATDNDRIILPQQQRLRHPEPPGSDSKGEAPQEA--------GPNTFTDLLPLWPKLLKDESAAVRGAAARAAFAAATAAPLSRLKSAGAEGSLVLRLLTEMLACGDPEVAWVVAGGAGQFVANEGKILRAMY--------GSGXXXXXXXXXXXXXXXTLGPEEEKEQEGHFREVALSKFIKTVGKMLQEHGDRLRHGRWQSLHDFTALLRALGSIGCESDPTDELGRSVYLWTLIRLVDVWVDEGNECGSAAHEQIVRVCNRCRVPLPQLLKLPPTSTSTAGIAG---RWVGVDAGTIVPLKAAAG-------AGRELDSGSVLAPLMEKLMETGHLEEFVEQALKSRNLRAFLEGSVAHVLPVFVAGSKAVAVEQLAALCDHFEV 4155
Q YLECEHAQL+FGEGG RAVS+P+ KLCALL LPRF LQ RLV HVGLLASLWLPRDA++L++FFQDSVELLQD G F SS +G RT P HRA +R L PG+HD Y RA ASG HA +QLWSLLG QLD LRP T+ L QVSL+AL+ LLE+ PPVG MPQLGI+C+RLAGRAL G G + D A + AIQ L RC+RL+F S PQ K A+ + L + +AA + + + A TA SLSA LPCI RWWA CQ + D V + + TEA +LARA+AAAYASAVE + Q A K +V ++ + K TP+ KR G TT AA VP+RFA+AVSAL VPCVQPEL+R LR VL RFP+ IAVLRRA AD + RG A SA XXXXXXXXXXXXXXXXXXXXXXXX + RV+LE GLRAAAAGG S + S LRGGG S + RG TPL G+ P FSGDS+ EAI AVLARA A+ FFE A T G G+G G D + A + GSS G LHL+LQHT +VTCALR+LAP+ A + G DEAG++LEFG KRGS+ A R TR + + WPSLI +L + F AA+R +RYK S G ESGASA PR +A L DM+V+CAA++P + P GG G RGE P + L + AA KALE +++PG + A +G L GT+LGP A APFPLKCFLLAAA + ++ D AG+G + RR+ G GG D+ + VEEAFLA LRHDGSALV +C+VAALP +SLC N G C SN SS G TEH C+W+TRWLPAL+ L E GGSE VRLELA+ LLRLG+SLD AT AT L + QR RH S+G P A GPN F D+LPLWP LLKDES AVR AAARA AAA AAPLSRL+ AG G+ VLRLLT ML+CGDPEV+WVVAGGAG F+A GK+LRAMY G XXXXXXX RE ALS+FI+T+GKMLQEHGD LR GRWQSLH+FTALLRALGSIGCESDP+D+LGR+VYLWTLIRLVDVWVDEGNEC AAHEQIVRVCN + PLP LL+LPP S S G +G R G A L G G E+DSGS+LAPL+EKLMETGH+EEFVEQAL SRN RAFLE S+AHVLPVFVAGSKA AVE LAALCD FEV
Sbjct: 82 QSYLECEHAQLVFGEGGARAVSFPIRKLCALLPLPRFAGLQPRLVQHVGLLASLWLPRDAASLVEFFQDSVELLQDASGVFRSSGEGPRTGPSGHRAFFQRTFLSLPGVHDKYHGGGRRAHASGAHANSQLWSLLGRQLDKELRPDTQDLLQVSLKALLVLLEKPPPVGAMPQLGISCVRLAGRALCPPLGADGSEAMDAGGASDREYSAMALEHLAAIQDLATRCLRLVFSGSYRKPQPKKRKASRTSGARAXXXXXXXXXXXXXXXXXLQSTKKAAAAAKAFAPKAGGAXXXXXXXXTACFTSLSATLPCIARWWASCQGSV--DEVHGAARMNT---------------TEAAALARAIAAAYASAVEIAGQHPSAGKVSAIVATASRKATAKDKTPQKKRGAETPRGWDAGTPRFGAGPTTPRPAAARRPVASSTAPPPVPRRFAAAVSALVGVPCVQPELVRTLRVVLMRFPQAPIAVLRRAGPADQEHVRGDPNAAVSAQGEGXXXXXXXXXXXXXXXXXXXXXXXXSGKKKGRVSLEAEGLRAAAAGGHSGARRNRGGSLLPASA----LRGGGRASFARAKVLSKTRGRKTTPLAGRSGRGVPLPFSGDSSVREAIHAVLARARVAVEFFETDRMAARETSSGDGEGDGGGIGGVDRPAAVAGVQPEEVSGSSAGRLHLLLQHTAAVTCALRILAPYARAARVKARTNGADEAGKKLEFGVRGQKRGSSTPRVASTRKRSPGTRKRSSAGDRGWPSLIDQLAEAFGAALRTVSRYKTSASSGGGQESRESGASA---------PRAVAGLWDMLVSCAADVPAPFIVRRPPGGSNETGTGGRAAAGSRGELPSSRLGTTVRSAAEKALEFVLAPGWGYANEALEG-------LALTGTLLGPVEAPAPFPLKCFLLAAALSKGSGPGDDADDFGAAGVGGSRLRRRSSRGEDDNEEGRPKKKRARGDNRRGSLGAGDRGRENHTGGGGTADNHEGGDNFVFDVEEAFLAVLRHDGSALVTRCSVAALPTLSLCGPNRGECLSNVSSSGCGRFTEHAATCNWKTRWLPALLELCENGGQGGSEEVRLELASGLLRLGASLDRTARNSGVATEATATAAAALRRLQRPRH-----HPSRGGLPLGAMLGKRVPVGPNVFVDMLPLWPALLKDESVAVRAAAARAVLAAAGAAPLSRLRLAGRAGAAVLRLLTSMLSCGDPEVSWVVAGGAGLFLAEGGKMLRAMYHYNSVDAAAQGAPGEEMEVXXXXXXXXXXXXXXXXXXXRSREKALSRFIETIGKMLQEHGDGLRLGRWQSLHEFTALLRALGSIGCESDPSDDLGRTVYLWTLIRLVDVWVDEGNECAPAAHEQIVRVCNHGKAPLPHLLRLPPVSASYLGGSGDRQRDRGARASRAPRLGGRRGRSAPLGVVGLEMDSGSILAPLIEKLMETGHVEEFVEQALGSRNFRAFLEDSIAHVLPVFVAGSKAAAVEHLAALCDQFEV 1545 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11527.3172.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11527.3172.1 >prot_M-pyrifera_M_contig11527.3172.1 ID=prot_M-pyrifera_M_contig11527.3172.1|Name=mRNA_M-pyrifera_M_contig11527.3172.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=1385bp MFPHSQQYLECEHAQLIFGEGGTRAVSYPVWKLCALLSLPRFGALQGRLVback to top mRNA from alignment at M-pyrifera_M_contig11527:563..9715- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11527.3172.1 ID=mRNA_M-pyrifera_M_contig11527.3172.1|Name=mRNA_M-pyrifera_M_contig11527.3172.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=9153bp|location=Sequence derived from alignment at M-pyrifera_M_contig11527:563..9715- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11527:563..9715- >mRNA_M-pyrifera_M_contig11527.3172.1 ID=mRNA_M-pyrifera_M_contig11527.3172.1|Name=mRNA_M-pyrifera_M_contig11527.3172.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=8310bp|location=Sequence derived from alignment at M-pyrifera_M_contig11527:563..9715- (Macrocystis pyrifera P11B4 male)back to top |