mRNA_M-pyrifera_M_contig115269.3171.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig115269.3171.1 vs. uniprot
Match: A0A397LJD6_9FLAO (HYR domain-containing protein n=1 Tax=Flavobacteriaceae bacterium MAR_2010_72 TaxID=1250029 RepID=A0A397LJD6_9FLAO) HSP 1 Score: 134 bits (336), Expect = 6.650e-33 Identity = 86/186 (46.24%), Postives = 112/186 (60.22%), Query Frame = 1
Query: 1 GVTDVTGTATDGGGNSASCTFRITVIDPVSPTIS-CYS-ASSATNPGACSATVFFRDPDAFDVCGVDITQSGTLASGQTLYRGTYSTTFTATDPSNNSASCISTVTVFDIEPPVVVGCPADI-EVTNAVGCDVPVTWDESSVTSTDNCGVVSITQSHVPGATFPRGLTTVSYSASDASGNVGQCSF 549
G T VT TA D GNS C+F +T+ D +P IS C S S T+ C+A V + P A D C V S T + G T GT + T+TA D + NS C VT+ D + PV+ GCP++I + T+A GC+ VTW ++ T+ DNC V S T +H PGATFP G TTV+Y+A DA+GN QCSF
Sbjct: 1012 GTTTVTYTAQDAAGNSVQCSFDVTITDDDAPVISGCPSNISQGTDASGCNAVVTWTTPTAADNCAVTSFTS-THSPGATFPVGTTTVTYTAQDAAGNSVQCSFDVTITDDDAPVISGCPSNISQGTDASGCNAVVTW--TTPTAADNCAVTSFTSTHNPGATFPVGTTTVTYTAQDAAGNSVQCSF 1194
BLAST of mRNA_M-pyrifera_M_contig115269.3171.1 vs. uniprot
Match: A0A7C5EGF8_9BACT (HYR domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C5EGF8_9BACT) HSP 1 Score: 128 bits (322), Expect = 4.810e-31 Identity = 85/186 (45.70%), Postives = 106/186 (56.99%), Query Frame = 1
Query: 1 GVTDVTGTATDGGGNSASCTFRITVIDPVSPTISC-YSASSATNPGACSATVFFRDPDAFDVC-GVDITQSGTLASGQTLYRGTYSTTFTATDPSNNSASCISTVTVFDIEPPVVVGCPADIEVTNAVG-CDVPVTWDESSVTSTDNCGVVSITQSHVPGATFPRGLTTVSYSASDASGNVGQCSF 549
G T T TA D GN+A C+F +TV D +PTI C S T+ G C A V + DP D C GV Q+ L SG G + + ATD + + ASC TVTV D E PV+ GCPADI V N G C V+W ++ ++DNC VS+ H G FP G+TTV+YSASDA+GN CSF
Sbjct: 886 GTTTETFTAVDAAGNTAVCSFSVTVDDMEAPTIVCPQPVSVVTDTGQCGAIVSYVDPVGSDNCPGVAAQQASGLGSGSLFPIGVTTEVWVATDAAGSVASCSFTVTVTDGEAPVITGCPADITVMNDPGLCTAAVSW--TAPVASDNCPGVSLVSDHPSGEDFPVGVTTVTYSASDAAGNTAVCSF 1069
BLAST of mRNA_M-pyrifera_M_contig115269.3171.1 vs. uniprot
Match: A0A3D0QPL6_9FLAO (Uncharacterized protein (Fragment) n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A3D0QPL6_9FLAO) HSP 1 Score: 128 bits (321), Expect = 6.530e-31 Identity = 81/181 (44.75%), Postives = 114/181 (62.98%), Query Frame = 1
Query: 22 TATDGGGNSASCTFRITVIDPVSPTIS-CYSASSATN-PGACSATVFFRDPDAFDVC-GVDITQSGTLASGQTLYRGTYSTTFTATDPSNNSASCISTVTVFDIEPPVVVGCPADIEVTNAVG-CDVPVTWDESSVTSTDNCGV-VSITQSHVPGATFPRGLTTVSYSASDASGNVGQCSF 549
TATD N+++CTF IT++D +SPTI+ C S + +N PG C V + P A D C G ITQ+ ASG TL G + T+TATD ++N+++C T+TV D + PV+ GCP++ +N G C V+W +VT DNC ++ T PG TFP G+T V+Y+A+DA+GNV CSF
Sbjct: 1021 TATDAASNTSTCTFTITIVDNLSPTITGCPSNQTLSNTPGTCGRVVTWTAPTATDNCAGATITQTAGPASGSTLPIGVTTITYTATDGASNTSTCSFTITVNDTQAPVIAGCPSNQTQSNTPGTCGRVVSWTVPTVT--DNCSATITQTAGPSPGNTFPVGVTNVTYTATDAAGNVSTCSF 1199
BLAST of mRNA_M-pyrifera_M_contig115269.3171.1 vs. uniprot
Match: UPI002004DEB8 (HYR domain-containing protein n=1 Tax=Subsaxibacter sp. CAU 1640 TaxID=2933271 RepID=UPI002004DEB8) HSP 1 Score: 124 bits (312), Expect = 1.300e-30 Identity = 82/186 (44.09%), Postives = 111/186 (59.68%), Query Frame = 1
Query: 1 GVTDVTGTATDGGGNSASCTFRITVIDPVSPTISCYSA--SSATNPGACSATVFFRDPDAFDVCGVDITQSGTLASGQTLYRGTYSTTFTATDPSNNSASCISTVTVFDIEPPVVVGCPADIEVTNAVG-CDVPVTWDESSVTSTDNCGVVSITQSHVPGATFPRGLTTVSYSASDASGNVGQCSF 549
G T VT T+TD GN +C+F ITV D +P IS A S A + G CSA V + P A D C +T S + G T GT + T+T+TD + N +C +TV D E PV+ GCPA+I V N G C V+W ++ T++DNC ++T SH PG TF G TTV+Y+++DA+GN+ CSF
Sbjct: 241 GTTTVTYTSTDAAGNIDTCSFDITVSDNENPVISGCPANISVANDAGNCSAAVSWTPPTASDNCSQTLTSS--YSPGDTFALGTTTVTYTSTDAAGNLDTCSFDITVSDNENPVISGCPANITVANDAGNCSAAVSW--TAPTASDNCSQ-TLTSSHSPGDTFALGTTTVTYTSTDAAGNIDTCSF 421
BLAST of mRNA_M-pyrifera_M_contig115269.3171.1 vs. uniprot
Match: A0A651GRB8_9FLAO (HYR domain-containing protein n=1 Tax=Cryomorphaceae bacterium TaxID=1898111 RepID=A0A651GRB8_9FLAO) HSP 1 Score: 126 bits (316), Expect = 3.070e-30 Identity = 84/187 (44.92%), Postives = 110/187 (58.82%), Query Frame = 1
Query: 1 GVTDVTGTATDGGGNSASCTFRITVIDPVSPTIS-CYSASSATNP-GACSATVFFRDPDAFDVCGVDITQSGTLASGQTLYRGTYSTTFTATDPSNNSASCISTVTVFDIEPPVVVGCPADIEVTNAVGCDVPVTWDESSVTSTDNCGVVSITQSHVPG--ATFPRGLTTVSYSASDASGNVGQCSF 549
GV +T A D GN+A+C+F IT+ID + PTIS C S + +N G C A V + P D C ++ + SG T G+ + T+T TD S N+ASC VTV D E PV+ CP +IE C+ V WD +++TDNC V S+TQ+ PG ATFP G TTV+Y A DASGNV C+F
Sbjct: 1238 GVHTITYEAVDASGNTATCSFTITIIDEIDPTISDCPSDITLSNDEGVCGAVVNYEPPVGDDNCDFTLSLTSGFESGATFPVGSTTVTWTVTDNSGNTASCSFVVTVTDEEAPVI-ACPGNIET-----CEPEVDWD---ISATDNCEVTSLTQTEGPGPGATFPIGTTTVTYEAVDASGNVSTCTF 1415
BLAST of mRNA_M-pyrifera_M_contig115269.3171.1 vs. uniprot
Match: UPI00191CE152 (HYR domain-containing protein n=1 Tax=Marivirga atlantica TaxID=1548457 RepID=UPI00191CE152) HSP 1 Score: 120 bits (301), Expect = 3.120e-28 Identity = 77/186 (41.40%), Postives = 105/186 (56.45%), Query Frame = 1
Query: 1 GVTDVTGTATDGGGNSASCTFRITVIDPVSPTI-SCYSASSATNPG-ACSATVFFRDPDAFDVCGVDITQSGTLASGQTLYRGTYSTTFTATDPSNNSASCISTVTVFDIEPPVVVGCPADIEVTNAVGCDVPVTWDESSVTSTDNCGV-VSITQSHVPGATFPRGLTTVSYSASDASGNVGQCSF 549
GVT+VT TA D GN++SC+F +TVID SP I SC T P +C+AT + P D C ++T T +SGQ+ RGT T+ ATD + N+++C V V D+ P CP+DI+V C+ W S + DNC + I SH PG FP G+T V+Y+A+D SGN C+F
Sbjct: 896 GVTEVTYTAEDDFGNTSSCSFNVTVIDESSPEITSCPEDIVLTLPAFSCAATATWSTPTFTDNCDNNLTIEKTHSSGQSFERGTTQVTYAATDDAGNTSTCSFNVIVQDVTAPTFTNCPSDIQVVADNNCEASANW--SVPVAADNCDEQIQIVSSHAPGNKFPLGITEVTYTATDLSGNSTTCTF 1079
BLAST of mRNA_M-pyrifera_M_contig115269.3171.1 vs. uniprot
Match: A0A2D8LM01_9FLAO (Uncharacterized protein n=2 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2D8LM01_9FLAO) HSP 1 Score: 120 bits (301), Expect = 3.150e-28 Identity = 82/186 (44.09%), Postives = 106/186 (56.99%), Query Frame = 1
Query: 1 GVTDVTGTATDGGGNSASCTFRITVIDPVSPTIS-CYSASSATN-PGACSATVFFRDPDAFDVCGVDITQSGTLASGQTLYRGTYSTTFTATDPSNNSASCISTVTVFDIEPPVVVGCPADIEVTNAVG-CDVPVTWDESSVTSTDNCGVVSITQSHVPGATFPRGLTTVSYSASDASGNVGQCSF 549
G T V TATD GN+ +C+F +T+ + +P IS C S TN PG CSA V + P D CG + G+ G T G+ T+ ATD S N A C TVTV D E P++ CP +I VTN +G CD V+W +TDNC V ++ +H PG F G TTV+Y+A+DASGN CSF
Sbjct: 1109 GETTVVYTATDASGNTDTCSFIVTITENEAPVISNCPSNIVMTNDPGNCSAVVSWTPPSQTDNCGATLV--GSHVPGDTFAVGSTMVTYVATDTSGNQAVCSFTVTVEDTENPIINSCPTNIFVTNDLGQCDAEVSWVVPL--ATDNCSV-TLVSTHNPGDVFQLGTTTVTYTATDASGNEANCSF 1289
BLAST of mRNA_M-pyrifera_M_contig115269.3171.1 vs. uniprot
Match: UPI002003B74F (HYR domain-containing protein n=1 Tax=Subsaxibacter sp. CAU 1640 TaxID=2933271 RepID=UPI002003B74F) HSP 1 Score: 120 bits (300), Expect = 4.340e-28 Identity = 80/186 (43.01%), Postives = 109/186 (58.60%), Query Frame = 1
Query: 1 GVTDVTGTATDGGGNSASCTFRITVIDPVSPTIS-C-YSASSATNPGACSATVFFRDPDAFDVCGVDITQSGTLASGQTLYRGTYSTTFTATDPSNNSASCISTVTVFDIEPPVVVGCPADIEVTNAVG-CDVPVTWDESSVTSTDNCGVVSITQSHVPGATFPRGLTTVSYSASDASGNVGQCSF 549
G T VT T+TD N +C+F ITV D +P IS C + S A + G CSA V + P A D C +T S + G T GT + T+T+TD + N +C +TV D E PV+ GCP +I V N G C V+W + T++DNC ++T SH PG TF G TTV+Y+++DA+GN+ CSF
Sbjct: 29 GTTTVTYTSTDAASNIDTCSFDITVTDNENPVISGCPVNISVANDAGNCSAAVSWTPPTASDNCSQTLTSSH--SPGDTFALGTTTVTYTSTDAAGNLDTCSFDITVSDNENPVISGCPVNISVANDAGNCSAAVSW--TPPTASDNCSQ-TLTSSHSPGDTFALGTTTVTYTSTDAAGNIDSCSF 209
BLAST of mRNA_M-pyrifera_M_contig115269.3171.1 vs. uniprot
Match: A0A553DKH3_9FLAO (HYR domain-containing protein n=1 Tax=Flavobacterium sp. ZT3R18 TaxID=2594429 RepID=A0A553DKH3_9FLAO) HSP 1 Score: 118 bits (296), Expect = 1.520e-27 Identity = 85/195 (43.59%), Postives = 110/195 (56.41%), Query Frame = 1
Query: 1 GVTDVTGTATDGGGNSASCTFRITVIDPVSPTIS-CYSASSATNP-GACSATVFFRDPDAFDVCGVDITQSGTLA------SGQTLYRGTYSTTFTATDPSNNSASCISTVTVFDIEPPVVVGCPADIEVTNAVG-CDVPVTWDESSVTSTDNC---GVVSITQSHVPGATFPRGLTTVSYSASDASGNVGQCSF 549
G + + TATD GN+A+C+F +TV D P S C S + +N G CSA V + P A D C T G+L SG T G + T+TATD + N+A+C TVTV D E PV CP++I +N +G C VTW S +TDNC G + T SH G TFP G TTV+Y+A DA+GN+ CSF
Sbjct: 1755 GTSTINYTATDAVGNTATCSFTVTVTDTEKPVFSYCPSNITVSNDLGNCSAVVTWTTPSATDNC----TAPGSLVWVKSHLSGSTFPVGATTVTYTATDAAGNTATCSFTVTVNDTEKPVFSYCPSNITTSNGLGNCSAVVTWTAPS--ATDNCTAPGSLVWTNSHSSGGTFPVGTTTVTYTAKDAAGNIVICSF 1943
BLAST of mRNA_M-pyrifera_M_contig115269.3171.1 vs. uniprot
Match: A0A3M0YJV1_9BACT (HYR domain-containing protein (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3M0YJV1_9BACT) HSP 1 Score: 117 bits (294), Expect = 2.730e-27 Identity = 82/185 (44.32%), Postives = 106/185 (57.30%), Query Frame = 1
Query: 1 GVTDVTGTATDGGGNSASCTFRITVIDPVSPTISCYSASSATNP-GACSATVFFRDPDAFDVCGVDITQSGTLASGQTLYRGTYSTTFTATDPSNNSASCISTVTVFDIEPPVVVGCPADIEVTNAVG-CDVPVTWDESSVTSTDNCGVVSITQSHVPGATFPRGLTTVSYSASDASGNVGQCSF 549
G T VT TATD GN+A CTF +TV D +PT++C + +N G CSA V + A D C V ++ S SG GT + T TATD ++N+A C VTV D E P V CPAD V+N G C V + + T+ DNCGV SI S G +FP G TTV+ +A+D +GN QC+F
Sbjct: 439 GTTTVTVTATDDAGNTAQCTFDVTVNDTENPTVTCPADQVVSNDAGLCSAVVNYPAAMATDNCSVTVSYSQN--SGTVFPVGTTTVTVTATDGASNTAQCTFDVTVNDTENPTVT-CPADQVVSNDPGMCSAVVNYP--AATANDNCGVSSIAYSQASGTSFPVGTTTVTVTATDNAGNTAQCTF 618 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115269.3171.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig115269.3171.1 >prot_M-pyrifera_M_contig115269.3171.1 ID=prot_M-pyrifera_M_contig115269.3171.1|Name=mRNA_M-pyrifera_M_contig115269.3171.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=183bp GVTDVTGTATDGGGNSASCTFRITVIDPVSPTISCYSASSATNPGACSATback to top mRNA from alignment at M-pyrifera_M_contig115269:14..562+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig115269.3171.1 ID=mRNA_M-pyrifera_M_contig115269.3171.1|Name=mRNA_M-pyrifera_M_contig115269.3171.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=549bp|location=Sequence derived from alignment at M-pyrifera_M_contig115269:14..562+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig115269:14..562+ >mRNA_M-pyrifera_M_contig115269.3171.1 ID=mRNA_M-pyrifera_M_contig115269.3171.1|Name=mRNA_M-pyrifera_M_contig115269.3171.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1098bp|location=Sequence derived from alignment at M-pyrifera_M_contig115269:14..562+ (Macrocystis pyrifera P11B4 male)back to top |