mRNA_M-pyrifera_M_contig115120.3147.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig115120.3147.1 vs. uniprot
Match: A0A7S0F743_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7S0F743_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 3.930e-9 Identity = 26/39 (66.67%), Postives = 31/39 (79.49%), Query Frame = 1
Query: 28 PLFSQVSLGSVTGFCAGYALKKVGRVAAVTIGLGFLTLQ 144
PL ++VS G V GFC+GYA+KKVG+ AVTIGLGF LQ
Sbjct: 20 PLIAKVSFGGVMGFCSGYAMKKVGKAVAVTIGLGFFGLQ 58
BLAST of mRNA_M-pyrifera_M_contig115120.3147.1 vs. uniprot
Match: A0A1E7F7A2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F7A2_9STRA) HSP 1 Score: 55.8 bits (133), Expect = 6.030e-9 Identity = 23/46 (50.00%), Postives = 35/46 (76.09%), Query Frame = 1
Query: 22 AGPLFSQVSLGSVTGFCAGYALKKVGRVAAVTIGLGFLTLQVRRSY 159
A P+ +++S GS+ G+C+GYALKK+G+ AAV +G GF+ +Q SY
Sbjct: 17 AKPIIAKISFGSIMGYCSGYALKKIGKAAAVILGCGFIAVQTCVSY 62
BLAST of mRNA_M-pyrifera_M_contig115120.3147.1 vs. uniprot
Match: A0A482R6I3_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482R6I3_9ARCH) HSP 1 Score: 56.6 bits (135), Expect = 4.060e-8 Identity = 30/51 (58.82%), Postives = 39/51 (76.47%), Query Frame = 1
Query: 1 LDDLAALAGPLFSQVSLGSVTGFCAGYALKKVGRVAAVTIGLGFLTLQVRR 153
LDD AL L +Q+S+GSV GFC+GYA+KKV +VAAV +G GF+ LQ+ R
Sbjct: 136 LDDPRALE-ELGTQLSIGSVAGFCSGYAIKKVSKVAAVAVGTGFVLLQLLR 185
BLAST of mRNA_M-pyrifera_M_contig115120.3147.1 vs. uniprot
Match: A0A0D2WLR2_CAPO3 (Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WLR2_CAPO3) HSP 1 Score: 54.7 bits (130), Expect = 6.970e-8 Identity = 25/47 (53.19%), Postives = 35/47 (74.47%), Query Frame = 1
Query: 4 DDLAALAGPLFSQVSLGSVTGFCAGYALKKVGRVAAVTIGLGFLTLQ 144
DD+ AL PL Q+S+G+V+GF AGYA KKVG+ A+ + +GF+ LQ
Sbjct: 37 DDVKALLAPLAQQLSMGTVSGFAAGYAAKKVGKAVAMVLAMGFVGLQ 83
BLAST of mRNA_M-pyrifera_M_contig115120.3147.1 vs. uniprot
Match: A0A5A8BZR3_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8BZR3_CAFRO) HSP 1 Score: 55.5 bits (132), Expect = 9.640e-8 Identity = 25/51 (49.02%), Postives = 38/51 (74.51%), Query Frame = 1
Query: 7 DLAALAGPLFSQVSLGSVTGFCAGYALKKVGRVAAVTIGLGFLTLQVRRSY 159
D AAL +++ LG + GF +GYA+KK+G++AA+T+GLGF+ +QV R Y
Sbjct: 117 DFAALIPDFGTELGLGILAGFSSGYAVKKIGKLAALTVGLGFVAMQVARHY 167
BLAST of mRNA_M-pyrifera_M_contig115120.3147.1 vs. uniprot
Match: UPI001668FB7F (FUN14 domain-containing protein n=2 Tax=Deinococcus TaxID=1298 RepID=UPI001668FB7F) HSP 1 Score: 52.4 bits (124), Expect = 3.180e-7 Identity = 23/40 (57.50%), Postives = 32/40 (80.00%), Query Frame = 1
Query: 28 PLFSQVSLGSVTGFCAGYALKKVGRVAAVTIGLGFLTLQV 147
PL +SLG+V GFCAGYA+K++GR+ A+ +GL FL LQ+
Sbjct: 24 PLLPSLSLGAVLGFCAGYAIKRLGRMTALIVGLLFLALQL 63
BLAST of mRNA_M-pyrifera_M_contig115120.3147.1 vs. uniprot
Match: A0A7V5WLN4_9DEIN (Uncharacterized protein n=1 Tax=Trueperaceae bacterium TaxID=2026798 RepID=A0A7V5WLN4_9DEIN) HSP 1 Score: 52.0 bits (123), Expect = 3.670e-7 Identity = 24/47 (51.06%), Postives = 31/47 (65.96%), Query Frame = 1
Query: 19 LAGPLFSQVSLGSVTGFCAGYALKKVGRVAAVTIGLGFLTLQVRRSY 159
L GP Q+S G V GF GYALKKVG++ A+ +GL F+ LQ+ Y
Sbjct: 10 LLGPYIQQISFGFVAGFVVGYALKKVGKMVAIALGLIFIILQILAYY 56
BLAST of mRNA_M-pyrifera_M_contig115120.3147.1 vs. uniprot
Match: A0A7S4JYV9_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JYV9_9STRA) HSP 1 Score: 53.1 bits (126), Expect = 6.010e-7 Identity = 24/36 (66.67%), Postives = 31/36 (86.11%), Query Frame = 1
Query: 37 SQVSLGSVTGFCAGYALKKVGRVAAVTIGLGFLTLQ 144
+Q+S G V G+C+GYALKKVG+ AAV +GLGF+TLQ
Sbjct: 113 TQLSYGFVCGYCSGYALKKVGKGAAVVLGLGFMTLQ 148
BLAST of mRNA_M-pyrifera_M_contig115120.3147.1 vs. uniprot
Match: F2NQ77_MARHT (FUN14 family protein n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) TaxID=869210 RepID=F2NQ77_MARHT) HSP 1 Score: 51.2 bits (121), Expect = 6.350e-7 Identity = 21/40 (52.50%), Postives = 30/40 (75.00%), Query Frame = 1
Query: 28 PLFSQVSLGSVTGFCAGYALKKVGRVAAVTIGLGFLTLQV 147
P Q++ G + GF GYALKK+G+V AV +G+GFL+LQ+
Sbjct: 6 PFVGQITFGGLAGFATGYALKKIGKVLAVILGIGFLSLQL 45
BLAST of mRNA_M-pyrifera_M_contig115120.3147.1 vs. uniprot
Match: B7G0Z2_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G0Z2_PHATC) HSP 1 Score: 52.8 bits (125), Expect = 7.020e-7 Identity = 24/36 (66.67%), Postives = 31/36 (86.11%), Query Frame = 1
Query: 37 SQVSLGSVTGFCAGYALKKVGRVAAVTIGLGFLTLQ 144
+Q+S G V+G+C+G ALKKVGR AAV +GLGF+TLQ
Sbjct: 94 TQLSYGFVSGYCSGMALKKVGRAAAVVLGLGFVTLQ 129 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115120.3147.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig115120.3147.1 >prot_M-pyrifera_M_contig115120.3147.1 ID=prot_M-pyrifera_M_contig115120.3147.1|Name=mRNA_M-pyrifera_M_contig115120.3147.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=53bp LDDLAALAGPLFSQVSLGSVTGFCAGYALKKVGRVAAVTIGLGFLTLQVRback to top mRNA from alignment at M-pyrifera_M_contig115120:368..526+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig115120.3147.1 ID=mRNA_M-pyrifera_M_contig115120.3147.1|Name=mRNA_M-pyrifera_M_contig115120.3147.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=159bp|location=Sequence derived from alignment at M-pyrifera_M_contig115120:368..526+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig115120:368..526+ >mRNA_M-pyrifera_M_contig115120.3147.1 ID=mRNA_M-pyrifera_M_contig115120.3147.1|Name=mRNA_M-pyrifera_M_contig115120.3147.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=318bp|location=Sequence derived from alignment at M-pyrifera_M_contig115120:368..526+ (Macrocystis pyrifera P11B4 male)back to top |