mRNA_M-pyrifera_M_contig115060.3135.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig115060.3135.1 vs. uniprot
Match: A0A7X6AP10_9ACTN (CoA transferase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6AP10_9ACTN) HSP 1 Score: 339 bits (870), Expect = 1.020e-114 Identity = 161/189 (85.19%), Postives = 170/189 (89.95%), Query Frame = 1
Query: 1 DVCLARNPALAYGRMTGWGQDGPYASTAGHDINYISLAGALEPIGRQGEGPVPPLNLVGDFGGGGMYLAFGLVCAILEARGSGEGQVVDAAMVDGAASLMTFFHGFRAMGIWNDERGTNMLDTGAHYYDVYECSDGKYVSIGSIEPQFYAELRDKLGLDDPKWDAQMSRSEWPAFKEELTAIFKTKTRD 567
D CLARNP L YGRMTGWGQDGPYA TAGHDINYI+LAGAL+ IGR GE PVPPLNLVGDFGGGG+YLAFGLVCAILEAR SGEGQVVDAAMVDGAASLMT HGFRAMGIWNDERGTNMLDTGAH+YDVYEC+DGKYVSIGSIEPQFYAELR+KLGLDD +W AQMSR+ WP K EL IF T+TRD
Sbjct: 88 DDCLARNPRLVYGRMTGWGQDGPYAPTAGHDINYIALAGALDSIGRAGEAPVPPLNLVGDFGGGGLYLAFGLVCAILEARSSGEGQVVDAAMVDGAASLMTIIHGFRAMGIWNDERGTNMLDTGAHFYDVYECADGKYVSIGSIEPQFYAELREKLGLDDERWAAQMSRTGWPGLKAELREIFATRTRD 276
BLAST of mRNA_M-pyrifera_M_contig115060.3135.1 vs. uniprot
Match: A0A2D8LRI3_9ACTN (Carnitine dehydratase n=4 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8LRI3_9ACTN) HSP 1 Score: 332 bits (850), Expect = 1.690e-111 Identity = 156/189 (82.54%), Postives = 168/189 (88.89%), Query Frame = 1
Query: 1 DVCLARNPALAYGRMTGWGQDGPYASTAGHDINYISLAGALEPIGRQGEGPVPPLNLVGDFGGGGMYLAFGLVCAILEARGSGEGQVVDAAMVDGAASLMTFFHGFRAMGIWNDERGTNMLDTGAHYYDVYECSDGKYVSIGSIEPQFYAELRDKLGLDDPKWDAQMSRSEWPAFKEELTAIFKTKTRD 567
D CLARNP L YGRMTGWGQ+GPYA AGHDINYI+LAGAL+ +GRQGE PVPPLNLVGDFGGGGMYLAFG+VCA+LEAR SGEGQVVDAAMVDGAASLMTFFHGFRAMGIWNDERGTN+LDTGAH+YDVYEC+DG +VSIGSIEPQFYA LR+K+ L DP WD QMSRS WP K EL A FK KTRD
Sbjct: 101 DDCLARNPRLVYGRMTGWGQEGPYAQAAGHDINYIALAGALDSMGRQGEAPVPPLNLVGDFGGGGMYLAFGMVCALLEARSSGEGQVVDAAMVDGAASLMTFFHGFRAMGIWNDERGTNLLDTGAHFYDVYECADGNFVSIGSIEPQFYAVLREKMELADPMWDQQMSRSAWPDLKTELMARFKDKTRD 289
BLAST of mRNA_M-pyrifera_M_contig115060.3135.1 vs. uniprot
Match: A0A3M2H348_ACTSX (CoA transferase n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2H348_ACTSX) HSP 1 Score: 328 bits (840), Expect = 5.550e-110 Identity = 152/189 (80.42%), Postives = 168/189 (88.89%), Query Frame = 1
Query: 1 DVCLARNPALAYGRMTGWGQDGPYASTAGHDINYISLAGALEPIGRQGEGPVPPLNLVGDFGGGGMYLAFGLVCAILEARGSGEGQVVDAAMVDGAASLMTFFHGFRAMGIWNDERGTNMLDTGAHYYDVYECSDGKYVSIGSIEPQFYAELRDKLGLDDPKWDAQMSRSEWPAFKEELTAIFKTKTRD 567
D C RNPAL YGRMTGWGQ+GPYA AGHDINYI+LAGALEPIGR+GE PVPPLNLVGDFGGGGM LAFG+VCA+LEAR SG GQVVDAAMVDGAA+LMTFFHGFRAMGIWNDERGTN+LDTGAH+YDVYE +DG+YVSIGSIEPQFYAELR++LGL+ +WDAQM RS WP KE L A+ T+TRD
Sbjct: 101 DDCFTRNPALVYGRMTGWGQEGPYAHAAGHDINYIALAGALEPIGRRGEAPVPPLNLVGDFGGGGMMLAFGVVCALLEARTSGRGQVVDAAMVDGAAALMTFFHGFRAMGIWNDERGTNLLDTGAHFYDVYETADGRYVSIGSIEPQFYAELRERLGLEGEEWDAQMDRSRWPELKERLAAVIATRTRD 289
BLAST of mRNA_M-pyrifera_M_contig115060.3135.1 vs. uniprot
Match: A0A7K1ZCR1_9ACTN (CoA transferase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1ZCR1_9ACTN) HSP 1 Score: 320 bits (821), Expect = 4.230e-107 Identity = 150/189 (79.37%), Postives = 166/189 (87.83%), Query Frame = 1
Query: 1 DVCLARNPALAYGRMTGWGQDGPYASTAGHDINYISLAGALEPIGRQGEGPVPPLNLVGDFGGGGMYLAFGLVCAILEARGSGEGQVVDAAMVDGAASLMTFFHGFRAMGIWNDERGTNMLDTGAHYYDVYECSDGKYVSIGSIEPQFYAELRDKLGLDDPKWDAQMSRSEWPAFKEELTAIFKTKTRD 567
D CLARNP L YGRMTGWGQ+GPYA+TAGHDINY++LAG L+ IGR GPVPPLNL+GDFGGGGMYLAFG+VCAILEAR S +GQVVDAAMVDG+ASL TFF+G RAMGIW D+RGTNMLDTGAHYYDVYEC+DGKYVSIGSIE QFYAELR+KLGLDD KW AQ + +W FK EL AIFKT+TRD
Sbjct: 101 DECLARNPTLVYGRMTGWGQNGPYAATAGHDINYVALAGTLDAIGRVDSGPVPPLNLIGDFGGGGMYLAFGMVCAILEARNSQKGQVVDAAMVDGSASLATFFYGLRAMGIWEDQRGTNMLDTGAHYYDVYECADGKYVSIGSIEGQFYAELREKLGLDDDKWGAQNDKRQWVDFKTELAAIFKTRTRD 289
BLAST of mRNA_M-pyrifera_M_contig115060.3135.1 vs. uniprot
Match: A0A3C0HLU1_9ACTN (Carnitine dehydratase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C0HLU1_9ACTN) HSP 1 Score: 315 bits (806), Expect = 2.340e-106 Identity = 146/173 (84.39%), Postives = 157/173 (90.75%), Query Frame = 1
Query: 1 DVCLARNPALAYGRMTGWGQDGPYASTAGHDINYISLAGALEPIGRQGEGPVPPLNLVGDFGGGGMYLAFGLVCAILEARGSGEGQVVDAAMVDGAASLMTFFHGFRAMGIWNDERGTNMLDTGAHYYDVYECSDGKYVSIGSIEPQFYAELRDKLGLDDPKWDAQMSRSEWP 519
D CLARNP L YGRMTGWGQ+GPYA AGHDINYI+LAGAL+ +GRQGE PVPPLNLVGDFGGGGMYLAFG+VCA+LEAR SGEGQVVDAAMVDGAASLMTFFHGFRAMGIWNDERGTN+LDTGAH+YDVYEC+DG +VSIGSIEPQFYA LRD + L DP WD QMSRS WP
Sbjct: 101 DDCLARNPRLVYGRMTGWGQEGPYAQAAGHDINYIALAGALDSMGRQGEAPVPPLNLVGDFGGGGMYLAFGMVCALLEARSSGEGQVVDAAMVDGAASLMTFFHGFRAMGIWNDERGTNLLDTGAHFYDVYECADGNFVSIGSIEPQFYAVLRDIMELADPMWDQQMSRSAWP 273
BLAST of mRNA_M-pyrifera_M_contig115060.3135.1 vs. uniprot
Match: UPI001F268B94 (CoA transferase n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001F268B94) HSP 1 Score: 308 bits (790), Expect = 1.540e-102 Identity = 147/190 (77.37%), Postives = 164/190 (86.32%), Query Frame = 1
Query: 1 DVCLARNPALAYGRMTGWGQDGPYASTAGHDINYISLAGALEPIGRQGEGPVPPLNLVGDFGGGGMYLAFGLVCAILEARGSGEGQVVDAAMVDGAASLMTFFHGFRAMGIWNDERGTNMLDTGAHYYDVYECSDGKYVSIGSIEPQFYAELRDKLGL-DDPKWDAQMSRSEWPAFKEELTAIFKTKTRD 567
+VCLARNP L +GRMTGWGQDGPY+ AGHDINYI+LAGALEPIGR G+ P+PPLNLVGDFGGGGM LAFG+VCA+LEA+ SGEGQVVDAAMVDGAA LMT FH FRAMGIWNDERGTN+LDTGA++Y+VYE +DGKYVSIGS+EPQFYA L DKLGL DDP Q RS+WPA KE IF+TKTRD
Sbjct: 90 EVCLARNPKLVFGRMTGWGQDGPYSQMAGHDINYIALAGALEPIGRAGQRPLPPLNLVGDFGGGGMLLAFGVVCALLEAQRSGEGQVVDAAMVDGAAVLMTMFHAFRAMGIWNDERGTNLLDTGAYFYEVYETADGKYVSIGSLEPQFYATLLDKLGLADDPSMPRQHDRSQWPAMKERFAEIFRTKTRD 279
BLAST of mRNA_M-pyrifera_M_contig115060.3135.1 vs. uniprot
Match: A0A349B115_9ACTN (Carnitine dehydratase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349B115_9ACTN) HSP 1 Score: 307 bits (786), Expect = 8.850e-102 Identity = 148/190 (77.89%), Postives = 162/190 (85.26%), Query Frame = 1
Query: 1 DVCLARNPALAYGRMTGWGQDGPYASTAGHDINYISLAGALEPIGRQGEGPVPPLNLVGDFGGGGMYLAFGLVCAILEARGSGEGQVVDAAMVDGAASLMTFFHGFRAMGIWNDERGTNMLDTGAHYYDVYECSDGKYVSIGSIEPQFYAELRDKLGLD-DPKWDAQMSRSEWPAFKEELTAIFKTKTRD 567
+ C ARNP + YGRMTGWGQDGPYA AGHDINYI+LAGALEPIGR+GE PVPPLNLVGDFGGGGM+LAFG+VCA+LEA+ SGEGQVVDAAMVDGAA L T FH FRAMGIWNDERGTN+LDTGAH+YDVYE SD KYVSIGSIEPQFYAEL + GL D + QM RS+WPA KE + IFKTKTRD
Sbjct: 101 EECKARNPKIVYGRMTGWGQDGPYAQAAGHDINYIALAGALEPIGRRGEAPVPPLNLVGDFGGGGMFLAFGIVCALLEAQRSGEGQVVDAAMVDGAAVLTTMFHAFRAMGIWNDERGTNLLDTGAHFYDVYETSDAKYVSIGSIEPQFYAELLELSGLGADEELPHQMDRSQWPALKERVAEIFKTKTRD 290
BLAST of mRNA_M-pyrifera_M_contig115060.3135.1 vs. uniprot
Match: A0A350REU4_9ACTN (Carnitine dehydratase n=10 Tax=Actinobacteria TaxID=201174 RepID=A0A350REU4_9ACTN) HSP 1 Score: 303 bits (776), Expect = 2.900e-100 Identity = 142/190 (74.74%), Postives = 162/190 (85.26%), Query Frame = 1
Query: 1 DVCLARNPALAYGRMTGWGQDGPYASTAGHDINYISLAGALEPIGRQGEGPVPPLNLVGDFGGGGMYLAFGLVCAILEARGSGEGQVVDAAMVDGAASLMTFFHGFRAMGIWNDERGTNMLDTGAHYYDVYECSDGKYVSIGSIEPQFYAELRDKLGLD-DPKWDAQMSRSEWPAFKEELTAIFKTKTRD 567
D CLARNP L YGRMTGWGQ+GPYA AGHDINYI+LAGALEPIGRQGE PVPPLNLVGDFGGGGM LAFG+VCA++EA+ SGEGQVVDAAMVDGAA+LM FH RA+G+WNDERGTN+LDTG+H+YDVYEC+DG+Y+SIGSIEPQFYAEL GL+ D + QM R+ WP KE + A+F TKTRD
Sbjct: 101 DECLARNPRLVYGRMTGWGQEGPYAMAAGHDINYIALAGALEPIGRQGEAPVPPLNLVGDFGGGGMLLAFGVVCAVVEAQRSGEGQVVDAAMVDGAATLMAMFHSMRALGVWNDERGTNLLDTGSHFYDVYECADGRYISIGSIEPQFYAELLRLTGLEQDEGFAGQMDRTSWPDLKERIGAVFLTKTRD 290
BLAST of mRNA_M-pyrifera_M_contig115060.3135.1 vs. uniprot
Match: A0A7C7X9U9_9ACTN (CoA transferase n=7 Tax=root TaxID=1 RepID=A0A7C7X9U9_9ACTN) HSP 1 Score: 301 bits (772), Expect = 1.170e-99 Identity = 141/190 (74.21%), Postives = 161/190 (84.74%), Query Frame = 1
Query: 1 DVCLARNPALAYGRMTGWGQDGPYASTAGHDINYISLAGALEPIGRQGEGPVPPLNLVGDFGGGGMYLAFGLVCAILEARGSGEGQVVDAAMVDGAASLMTFFHGFRAMGIWNDERGTNMLDTGAHYYDVYECSDGKYVSIGSIEPQFYAELRDKLGLD-DPKWDAQMSRSEWPAFKEELTAIFKTKTRD 567
+ CLARNP L +GRMTGWGQ+GPYA AGHDINYI+LAGALEPIGR GE PVPPLNLVGDFGGGGM LAFG+ C I+EA+ SG GQVVDAAMVDGAASLM FH RA+GIWNDERGTN+LDTG+H+YDVYEC+DG+Y+SIGSIEPQFYAEL GLD D + AQ+SRS WP KE ++ +FKT+TRD
Sbjct: 101 EECLARNPKLVFGRMTGWGQEGPYAMAAGHDINYIALAGALEPIGRNGEAPVPPLNLVGDFGGGGMLLAFGVACGIVEAQRSGHGQVVDAAMVDGAASLMAMFHSMRALGIWNDERGTNLLDTGSHFYDVYECADGRYISIGSIEPQFYAELMRLTGLDGDEDFAAQLSRSSWPELKERISTLFKTRTRD 290
BLAST of mRNA_M-pyrifera_M_contig115060.3135.1 vs. uniprot
Match: UPI001AD37F58 (Alpha-methylacyl-CoA racemase n=1 Tax=Myxococcaceae bacterium TaxID=2484252 RepID=UPI001AD37F58) HSP 1 Score: 301 bits (772), Expect = 1.170e-99 Identity = 144/189 (76.19%), Postives = 157/189 (83.07%), Query Frame = 1
Query: 1 DVCLARNPALAYGRMTGWGQDGPYASTAGHDINYISLAGALEPIGRQGEGPVPPLNLVGDFGGGGMYLAFGLVCAILEARGSGEGQVVDAAMVDGAASLMTFFHGFRAMGIWNDERGTNMLDTGAHYYDVYECSDGKYVSIGSIEPQFYAELRDKLGLDDPKWDAQMSRSEWPAFKEELTAIFKTKTRD 567
D C ARNP L YGRMTGWGQ+GP AS AGHDINYI+LAGALEPIGR+GE PVPPLNLVGDFGGGGM LAFG+VCA+LEAR SG GQVVDAAMVDGAA LM FHG R MG W+DERGTN+LDTGAH+YDVYE DGKYVSIGSIEPQFYAEL +K GL K QM RS+W KE L +IF+T+TRD
Sbjct: 102 DACFARNPRLVYGRMTGWGQEGPLASAAGHDINYIALAGALEPIGRRGEPPVPPLNLVGDFGGGGMLLAFGIVCALLEARSSGRGQVVDAAMVDGAAVLMNIFHGMRQMGFWSDERGTNLLDTGAHFYDVYETKDGKYVSIGSIEPQFYAELLEKTGLAGEKLPHQMDRSKWSELKERLRSIFRTRTRD 290 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115060.3135.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig115060.3135.1 >prot_M-pyrifera_M_contig115060.3135.1 ID=prot_M-pyrifera_M_contig115060.3135.1|Name=mRNA_M-pyrifera_M_contig115060.3135.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=189bp DVCLARNPALAYGRMTGWGQDGPYASTAGHDINYISLAGALEPIGRQGEGback to top mRNA from alignment at M-pyrifera_M_contig115060:2..568+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig115060.3135.1 ID=mRNA_M-pyrifera_M_contig115060.3135.1|Name=mRNA_M-pyrifera_M_contig115060.3135.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=567bp|location=Sequence derived from alignment at M-pyrifera_M_contig115060:2..568+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig115060:2..568+ >mRNA_M-pyrifera_M_contig115060.3135.1 ID=mRNA_M-pyrifera_M_contig115060.3135.1|Name=mRNA_M-pyrifera_M_contig115060.3135.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1134bp|location=Sequence derived from alignment at M-pyrifera_M_contig115060:2..568+ (Macrocystis pyrifera P11B4 male)back to top |