mRNA_M-pyrifera_M_contig114997.3117.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig114997.3117.1
Unique NamemRNA_M-pyrifera_M_contig114997.3117.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig114997.3117.1 vs. uniprot
Match: A0A6P8IEI3_ACTTE (solute carrier family 15 member 4-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IEI3_ACTTE)

HSP 1 Score: 122 bits (306), Expect = 1.680e-29
Identity = 68/159 (42.77%), Postives = 99/159 (62.26%), Query Frame = 1
Query:    1 AEQFQGASQEQVQSFFNWFYWMINVGSFISFTVIVYIEQEISFALGYLACTVAMAVALAVFFLGRNKYFVVPPAGSTLSRAIAAICSAAAYHSEHRRSAASTDSAKNESSCLDAVRVSAGGRFSDQLVDDLKALVGLLPIMCTFVMYWTVFTQMKSTFL 477
            A+Q +      +Q FFNWFYW IN+GSF+SFT++V+I+QE SF LGY     +M + +  F +GRN Y V PP GS L+ +   I  A       +R   +    K ES  LD  + S GGRFS   VDD+K+L+ +LP+   FV+YWT+++QM++++L
Sbjct:  189 ADQVREEGPGAIQRFFNWFYWFINIGSFVSFTLVVWIQQEESFFLGYTITACSMFLGVLTFLIGRNSYIVHPPGGSNLADSFKVIGLAI------KRKMKNIPKIKGES-WLDLAKDSRGGRFSATQVDDVKSLLRILPVFAMFVIYWTLYSQMQTSYL 340          
BLAST of mRNA_M-pyrifera_M_contig114997.3117.1 vs. uniprot
Match: UPI0001CBB7C8 (solute carrier family 15 member 4-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBB7C8)

HSP 1 Score: 119 bits (299), Expect = 1.710e-28
Identity = 61/158 (38.61%), Postives = 97/158 (61.39%), Query Frame = 1
Query:    1 AEQFQGASQEQVQSFFNWFYWMINVGSFISFTVIVYIEQEISFALGYLACTVAMAVALAVFFLGRNKYFVVPPAGSTLSRAIAAICSAAAYHSEHRRSAASTDSAKNESSCLDAVRVSAGGRFSDQLVDDLKALVGLLPIMCTFVMYWTVFTQMKSTF 474
            A+Q +   ++ VQ+FFNWFYW IN+GS +SF+V+ Y++QEISF  GYL  T+++  A+ +   GRN Y   PP GS  SR    +  +       +   A +++    +SCLD  + S GG ++D  V+++K L  ++PI  T + YWT++ QM+ST+
Sbjct:  182 AQQAEDLGRDAVQTFFNWFYWFINIGSAVSFSVVAYVQQEISFVYGYLIPTISILFAIILLLAGRNSYINRPPQGSAYSRVFKIVGQST------KGITAKSETCDVVNSCLDRAKTSHGGSYTDAHVEEVKLLGRIIPIFLTIIPYWTIYFQMQSTY 333          
BLAST of mRNA_M-pyrifera_M_contig114997.3117.1 vs. uniprot
Match: UPI00109B8247 (solute carrier family 15 member 4 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109B8247)

HSP 1 Score: 119 bits (298), Expect = 2.150e-28
Identity = 64/159 (40.25%), Postives = 99/159 (62.26%), Query Frame = 1
Query:    1 AEQFQGASQEQVQSFFNWFYWMINVGSFISFTVIVYIEQEISFALGYLACTVAMAVALAVFFLGRNKYFVVPPAGSTLSRAIAAICSAAAYHSEHRRSAASTDSAKNESSCLDAVRVSAGGRFSDQLVDDLKALVGLLPIMCTFVMYWTVFTQMKSTFL 477
            A+Q +    E +Q FFNWFYW IN+GSF SFT++VY++QE++F  GY+    +M +A+  F + +NKY V PP GS +        +A       R+S       K ES  LD  + + GG FS+  V+D+KAL+ ++PI   F++YWT+++QM++T+L
Sbjct:  187 ADQVKDLGPEAIQKFFNWFYWFINIGSFFSFTLVVYVQQEVNFFYGYIITAGSMFLAVIAFCIKKNKYIVHPPGGSIVGDTFKKNWTAM---KRSRKSERPIPRIKGES-WLDRAKETRGGHFSNGEVEDVKALLRIIPIFAMFIIYWTLYSQMQTTYL 341          
BLAST of mRNA_M-pyrifera_M_contig114997.3117.1 vs. uniprot
Match: A7SSZ4_NEMVE (Predicted protein (Fragment) n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7SSZ4_NEMVE)

HSP 1 Score: 119 bits (297), Expect = 2.450e-28
Identity = 66/163 (40.49%), Postives = 96/163 (58.90%), Query Frame = 1
Query:    1 AEQFQGASQEQVQSFFNWFYWMINVGSFISFTVIVYIEQEISFALGYLACTVAMAVALAVFFLGRNKYFVVPPAGSTLSRAIAAICSAAAYHSEHRRSAASTDSAKNESS----CLDAVRVSAGGRFSDQLVDDLKALVGLLPIMCTFVMYWTVFTQMKSTFL 477
            A+Q QG     VQ FFNWFYW IN+GSF+SFT+IV+++Q+ +F  GY    ++M +   VF  GRN Y V PP GS L+     +  A   H           S KN  S     LD  + S GG FS   V+++K+L+ LLP+   F++YWT+++QM++++L
Sbjct:  181 ADQVQGKGPRAVQKFFNWFYWFINIGSFLSFTLIVWVQQKYTFFYGYAVTAISMMIGTVVFMTGRNWYVVRPPGGSVLTDTYRVVKLAIKRH---------WSSDKNLQSEGIHWLDRAKESYGGAFSYHRVENVKSLIRLLPVFAMFIIYWTLYSQMQTSYL 334          
BLAST of mRNA_M-pyrifera_M_contig114997.3117.1 vs. uniprot
Match: UPI0014258E15 (solute carrier family 15 member 4-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014258E15)

HSP 1 Score: 118 bits (296), Expect = 4.190e-28
Identity = 61/159 (38.36%), Postives = 93/159 (58.49%), Query Frame = 1
Query:    1 AEQFQGASQEQVQSFFNWFYWMINVGSFISFTVIVYIEQEISFALGYLACTVAMAVALAVFFLGRNKYFVVPPAGSTLSRAIAAICSAAAYHSEHRRSAASTDSAKNESSCLDAVRVSAGGRFSDQLVDDLKALVGLLPIMCTFVMYWTVFTQMKSTFL 477
            A+Q +   +  +Q+FFNWFYW INVGS I+++V+VYI+QEISFA GY     ++ +A     +GRNKY   PP GS LSR    +  A++      +    T       +CLD  +   GG F  + VD +K L  ++P+    +MYWT++ QM++T++
Sbjct:  170 AQQLEDLGEGAIQTFFNWFYWFINVGSAIAYSVVVYIQQEISFAWGYSIPAFSILLATVALLIGRNKYITTPPEGSILSRICKIVWQASS------KCCGGTSKDVEVENCLDRAKEENGGSFLSEHVDQVKCLARIVPVFLCIIMYWTIYFQMQTTYI 322          
BLAST of mRNA_M-pyrifera_M_contig114997.3117.1 vs. uniprot
Match: A0A7M7NFX1_STRPU (Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7NFX1_STRPU)

HSP 1 Score: 117 bits (294), Expect = 7.730e-28
Identity = 59/158 (37.34%), Postives = 97/158 (61.39%), Query Frame = 1
Query:    1 AEQFQGASQEQVQSFFNWFYWMINVGSFISFTVIVYIEQEISFALGYLACTVAMAVALAVFFLGRNKYFVVPPAGSTLSRAIAAICSAAAYHSEHRRSAASTDSAKNESSCLDAVRVSAGGRFSDQLVDDLKALVGLLPIMCTFVMYWTVFTQMKSTF 474
            A+Q +      VQ+FFNWFYW INVGS I+++ +VY++QE+ F +G+    V++ ++L +  L R+KY + PP GS L++ +      A      R+        ++  SCLD  +VS GG++ DQ VDD+K+L  ++P+    ++YWT++ QM ST+
Sbjct:  164 AQQMEDLGPGAVQTFFNWFYWFINVGSGIAYSAVVYVQQEVGFDVGFTIPAVSILLSLIILALSRSKYLMKPPEGSVLTKVVKITYDGA------RKCTHPDPGEEDLDSCLDRTKVSKGGQYQDQEVDDVKSLGRVIPVFIPIIIYWTIYIQMSSTY 315          
BLAST of mRNA_M-pyrifera_M_contig114997.3117.1 vs. uniprot
Match: UPI001BB27439 (solute carrier family 15 member 4-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB27439)

HSP 1 Score: 117 bits (294), Expect = 9.130e-28
Identity = 58/159 (36.48%), Postives = 99/159 (62.26%), Query Frame = 1
Query:    1 AEQFQGASQEQVQSFFNWFYWMINVGSFISFTVIVYIEQEISFALGYLACTVAMAVALAVFFLGRNKYFVVPPAGSTLSRAIAAICSAAAYHSEHRRSAASTDSAKNESSCLDAVRVSAGGRFSDQLVDDLKALVGLLPIMCTFVMYWTVFTQMKSTFL 477
            A+Q +   +  VQ+FF WFYW INVGS I+++ +VY++QE+ F +G+   TV++ +++ +  L RNKY +  P GS L++ +        +    + +    +  ++  SCLD  ++S GGR+ DQ VDD+K+L  ++P+    V+YWT++ QM ST+L
Sbjct:  212 AQQMEDLGEGAVQTFFYWFYWFINVGSGIAYSAVVYVQQEVGFDVGFTIPTVSILLSIIILVLSRNKYLMKDPEGSVLTKVVKIT-----FDGTKQCTCMHPNQDEDLDSCLDRTKISKGGRYQDQEVDDVKSLGRVIPVFIPIVVYWTIYIQMSSTYL 365          
BLAST of mRNA_M-pyrifera_M_contig114997.3117.1 vs. uniprot
Match: UPI001CF1FE2B (solute carrier family 15 member 4-like n=2 Tax=Acropora TaxID=6127 RepID=UPI001CF1FE2B)

HSP 1 Score: 115 bits (288), Expect = 4.630e-27
Identity = 65/159 (40.88%), Postives = 92/159 (57.86%), Query Frame = 1
Query:    1 AEQFQGASQEQVQSFFNWFYWMINVGSFISFTVIVYIEQEISFALGYLACTVAMAVALAVFFLGRNKYFVVPPAGSTLSRAIAAICSAAAYHSEHRRSAASTDSAKNESSCLDAVRVSAGGRFSDQLVDDLKALVGLLPIMCTFVMYWTVFTQMKSTFL 477
            A+Q +      VQ+FFNWFYW INVGS ISFTV+VYI QE     GYL  T  M +A   F LGRNKY   PP GS LS  +  I +A   H              +    LD  +   GG+++D+ V+D+K L+ ++P+   F++YW +++QM+++FL
Sbjct:  180 ADQVEQEGPRAVQTFFNWFYWFINVGSLISFTVVVYI-QEYGLFYGYLITTGTMFLATITFVLGRNKYLNKPPGGSQLSETVKIIHNAIKNHHS-----------SDTEMWLDKAKTCFGGKYTDRQVEDVKLLLKVIPVFLLFIVYWIIYSQMQTSFL 326          
BLAST of mRNA_M-pyrifera_M_contig114997.3117.1 vs. uniprot
Match: UPI001EE5DD10 (solute carrier family 15 member 4-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE5DD10)

HSP 1 Score: 114 bits (285), Expect = 1.350e-26
Identity = 58/158 (36.71%), Postives = 90/158 (56.96%), Query Frame = 1
Query:    1 AEQFQGASQEQVQSFFNWFYWMINVGSFISFTVIVYIEQEISFALGYLACTVAMAVALAVFFLGRNKYFVVPPAGSTLSRAIAAICSAAAYHSEHRRSAASTDSAKNESSCLDAVRVSAGGRFSDQLVDDLKALVGLLPIMCTFVMYWTVFTQMKSTF 474
            A+Q +      VQ+FFNWFYW +N+G  I++T + Y++Q +SFA GYL   ++MA+A+ +F  G+ +Y  VPP  S LS +++  C   + HS            + E   L + R   GGRF D  VD + A++ +LPI    + Y  ++ QM+STF
Sbjct:  185 AQQVKDQGPLAVQTFFNWFYWFVNLGGLIAYTAVAYVQQNVSFAWGYLIPLISMALAVVIFMAGKGQYIHVPPGESVLSTSVSVCCQGCSCHSPE----------EEERPSLSSARTKYGGRFDDHTVDGVVAVLRILPIFALLIGYAAIYAQMQSTF 332          
BLAST of mRNA_M-pyrifera_M_contig114997.3117.1 vs. uniprot
Match: A0A2B4S144_STYPI (Solute carrier family 15 member 4 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4S144_STYPI)

HSP 1 Score: 113 bits (283), Expect = 2.400e-26
Identity = 63/159 (39.62%), Postives = 94/159 (59.12%), Query Frame = 1
Query:    1 AEQFQGASQEQVQSFFNWFYWMINVGSFISFTVIVYIEQEISFALGYLACTVAMAVALAVFFLGRNKYFVVPPAGSTLSRAIAAICSAAAYHSEHRRSAASTDSAKNESSCLDAVRVSAGGRFSDQLVDDLKALVGLLPIMCTFVMYWTVFTQMKSTFL 477
            A+Q Q      VQ+FFNWFYW INVGS I+FTV+V ++Q   FA GY      M +A+ VF  GRNKY   PP GS ++     +C A      HR+        +N    LD  + + GG+F++  V+D+K+L+ ++ +   F++YWT++ QM++TFL
Sbjct:  181 ADQVQQDGPRAVQAFFNWFYWFINVGSLIAFTVVVGVQQRNVFA-GYAITAGTMFLAVIVFLTGRNKYLTKPPGGSQITEITKILCDAR----RHRK--------QNTGGWLDGAKSTFGGKFTNAQVEDVKSLLRVIAVFFLFILYWTIYFQMQTTFL 326          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114997.3117.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6P8IEI3_ACTTE1.680e-2942.77solute carrier family 15 member 4-like n=1 Tax=Act... [more]
UPI0001CBB7C81.710e-2838.61solute carrier family 15 member 4-like n=1 Tax=Sac... [more]
UPI00109B82472.150e-2840.25solute carrier family 15 member 4 n=1 Tax=Exaiptas... [more]
A7SSZ4_NEMVE2.450e-2840.49Predicted protein (Fragment) n=2 Tax=Nematostella ... [more]
UPI0014258E154.190e-2838.36solute carrier family 15 member 4-like n=1 Tax=Ann... [more]
A0A7M7NFX1_STRPU7.730e-2837.34Uncharacterized protein n=1 Tax=Strongylocentrotus... [more]
UPI001BB274399.130e-2836.48solute carrier family 15 member 4-like n=1 Tax=Lyt... [more]
UPI001CF1FE2B4.630e-2740.88solute carrier family 15 member 4-like n=2 Tax=Acr... [more]
UPI001EE5DD101.350e-2636.71solute carrier family 15 member 4-like n=1 Tax=Hal... [more]
A0A2B4S144_STYPI2.400e-2639.62Solute carrier family 15 member 4 n=1 Tax=Stylopho... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig114997contigM-pyrifera_M_contig114997:2..568 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score118.6
Seed ortholog evalue2.6e-24
Seed eggNOG ortholog10224.XP_002739447.1
Preferred nameSLC15A5
KEGG koko:K14638,ko:K14639
KEGG TC2.A.17.3
Hectar predicted targeting categoryother localisation
EggNOG free text desc.symporter activity
EggNOG OGs396PQ@33154,3BIPV@33208,3CXJI@33213,COG3104@1,KOG1237@2759
Ec32 ortholog descriptionProton-dependent oligopeptide transporter family
Ec32 orthologEc-19_005090.1
COG Functional cat.E
Best tax levelBilateria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Exons2
Model size477
Cds size477
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815665.963589-CDS-M-pyrifera_M_contig114997:1..2091622815665.963589-CDS-M-pyrifera_M_contig114997:1..209Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig114997 2..209 -
1692277511.967255-CDS-M-pyrifera_M_contig114997:1..2091692277511.967255-CDS-M-pyrifera_M_contig114997:1..209Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig114997 2..209 -
1622815665.974518-CDS-M-pyrifera_M_contig114997:299..5681622815665.974518-CDS-M-pyrifera_M_contig114997:299..568Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig114997 300..568 -
1692277511.97986-CDS-M-pyrifera_M_contig114997:299..5681692277511.97986-CDS-M-pyrifera_M_contig114997:299..568Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig114997 300..568 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig114997.3117.1prot_M-pyrifera_M_contig114997.3117.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig114997 2..568 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig114997.3117.1

>prot_M-pyrifera_M_contig114997.3117.1 ID=prot_M-pyrifera_M_contig114997.3117.1|Name=mRNA_M-pyrifera_M_contig114997.3117.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=159bp
AEQFQGASQEQVQSFFNWFYWMINVGSFISFTVIVYIEQEISFALGYLAC
TVAMAVALAVFFLGRNKYFVVPPAGSTLSRAIAAICSAAAYHSEHRRSAA
STDSAKNESSCLDAVRVSAGGRFSDQLVDDLKALVGLLPIMCTFVMYWTV
FTQMKSTFL
back to top

mRNA from alignment at M-pyrifera_M_contig114997:2..568-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig114997.3117.1 ID=mRNA_M-pyrifera_M_contig114997.3117.1|Name=mRNA_M-pyrifera_M_contig114997.3117.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=567bp|location=Sequence derived from alignment at M-pyrifera_M_contig114997:2..568- (Macrocystis pyrifera P11B4 male)
GCTGAGCAGTTCCAGGGCGCGTCGCAGGAGCAGGTGCAGTCCTTCTTCAA CTGGTTCTACTGGATGATCAACGTTGGTAGCTTCATCTCCTTCACTGTTA TTGTGTACATCGAGCAGGAGATCTCCTTCGCCCTTGGCTACCTTGCCTGC ACCGTCGCCATGGCAGTTGCACTCGCTGTCTTCTTCCTCGGCCGCAACAA GTACTTCGTCGTGCCCCCCGCCGGCTCCACCCTCTCTCGGGCCATTGCCG CCATCTGCAGCGCTGCTGCGTACGCGAAGTGCATGTGCTGCTGCTCCCGT GGTAAGGTCCAGCACGAGGATCGCTCTCTGCTTACCGTGCCTGCCTCCTC TTCCACGAGCTACCACTCGGAGCACCGCCGCAGCGCCGCGTCTACGGACT CGGCCAAGAACGAGTCCTCCTGTCTGGATGCCGTTCGCGTCAGCGCTGGC GGCCGCTTCAGCGATCAGCTGGTAGACGACCTGAAGGCACTCGTGGGCCT GCTGCCTATCATGTGCACCTTTGTGATGTACTGGACTGTCTTCACCCAGA TGAAGAGCACGTTCCTC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig114997:2..568-

>mRNA_M-pyrifera_M_contig114997.3117.1 ID=mRNA_M-pyrifera_M_contig114997.3117.1|Name=mRNA_M-pyrifera_M_contig114997.3117.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=954bp|location=Sequence derived from alignment at M-pyrifera_M_contig114997:2..568- (Macrocystis pyrifera P11B4 male)
GCTGAGCAGTTCCAGGGCGCGTCGCAGGAGCAGGTGCAGTCCTTCTTCAA
CTGGTTCTACTGGATGATCAACGTTGGTAGCTTCATCTCCTTCACTGTTA
TTGTGTACATCGAGCAGGAGATCTCCTTCGCCCTTGGCTACCTTGCCTGC
ACCGTCGCCATGGCAGTTGCACTCGCTGTCTTCTTCCTCGGCCGCAACAA
GTACTTCGTCGTGCCCCCCGCCGGCTCCACCCTCTCTCGGGCCATTGCCG
CCATCTGCAGCGCTGCTGCGCTGAGCAGTTCCAGGGCGCGTCGCAGGAGC
AGGTGCAGTCCTTCTTCAACTGGTTCTACTGGATGATCAACGTTGGTAGC
TTCATCTCCTTCACTGTTATTGTGTACATCGAGCAGGAGATCTCCTTCGC
CCTTGGCTACCTTGCCTGCACCGTCGCCATGGCAGTTGCACTCGCTGTCT
TCTTCCTCGGCCGCAACAAGTACTTCGTCGTGCCCCCCGCCGGCTCCACC
CTCTCTCGGGCCATTGCCGCCATCTGCAGCGCTGCTGCCTACCACTCGGA
GCACCGCCGCAGCGCCGCGTCTACGGACTCGGCCAAGAACGAGTCCTCCT
GTCTGGATGCCGTTCGCGTCAGCGCTGGCGGCCGCTTCAGCGATCAGCTG
GTAGACGACCTGAAGGCACTCGTGGGCCTGCTGCCTATCATGTGCACCTT
TGTGATGTACTGGACTGTCTTCACCCAGATGAAGAGCACGTTCCTCCTAC
CACTCGGAGCACCGCCGCAGCGCCGCGTCTACGGACTCGGCCAAGAACGA
GTCCTCCTGTCTGGATGCCGTTCGCGTCAGCGCTGGCGGCCGCTTCAGCG
ATCAGCTGGTAGACGACCTGAAGGCACTCGTGGGCCTGCTGCCTATCATG
TGCACCTTTGTGATGTACTGGACTGTCTTCACCCAGATGAAGAGCACGTT
CCTC
back to top