mRNA_M-pyrifera_M_contig11487.3095.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11487.3095.1 vs. uniprot
Match: D7FZR9_ECTSI (Transmembrane amino acid transporter protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR9_ECTSI) HSP 1 Score: 286 bits (733), Expect = 3.410e-92 Identity = 143/193 (74.09%), Postives = 169/193 (87.56%), Query Frame = 1
Query: 1 RWLAVFSFCAISSVVLLVVIGGPIYGAEERSEPVHDANLDASVTWWDWSGSIAKMGSIVFALSCSPAVLHAYTSLSPRSSRSWRSVAGFAVGIGGGMCYAMGLAGYLSFRDAVDGDILENFSGAVASVFKAVVVVHLILYIPSEVIVLRHSLFALQNHDVMAADFGKVAWVTFAILASIVALMVGLDAAGVAQ 579
RWLAVFSFC I SVV LVVIGGPIY EER+EP HD +LDASV WWDW G++A +GSIVFALSC+PAVLHAY+S++PRS+R+WRSV+ +A+G+G +CY+MGLAGYLSFRD+VDGDIL NFSGA+ASVFKA VVVHLILYIPSEVIV+RHSL+AL+ DVM A+FG+VAWVTFA+LA V MVGL+ GVAQ
Sbjct: 271 RWLAVFSFCTICSVVALVVIGGPIYANEERAEPGHDPDLDASVVWWDWVGAVANLGSIVFALSCAPAVLHAYSSMTPRSTRAWRSVSTWALGVGVCLCYSMGLAGYLSFRDSVDGDILLNFSGAIASVFKAAVVVHLILYIPSEVIVMRHSLYALRGKDVMVAEFGQVAWVTFALLALAVGAMVGLNTVGVAQ 463
BLAST of mRNA_M-pyrifera_M_contig11487.3095.1 vs. uniprot
Match: A0A6H5KC39_9PHAE (Aa_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC39_9PHAE) HSP 1 Score: 283 bits (724), Expect = 4.130e-90 Identity = 140/193 (72.54%), Postives = 168/193 (87.05%), Query Frame = 1
Query: 1 RWLAVFSFCAISSVVLLVVIGGPIYGAEERSEPVHDANLDASVTWWDWSGSIAKMGSIVFALSCSPAVLHAYTSLSPRSSRSWRSVAGFAVGIGGGMCYAMGLAGYLSFRDAVDGDILENFSGAVASVFKAVVVVHLILYIPSEVIVLRHSLFALQNHDVMAADFGKVAWVTFAILASIVALMVGLDAAGVAQ 579
RWLAVFSFC I SVV LVVIGGPIY +EER+EP HD +LD SV WWDW G++A +GSIVFALSC+PAVLHAY+S++P+S+R+WRSVA +A+ +G +CY+MGLAGYLSFRD+VDGDIL NFSGA+ASVFK VVVHLILYIPSEVIV+RHSL+AL+ DVM A+FG+VAWVTFA+LA +V MVGL+ GVAQ
Sbjct: 271 RWLAVFSFCTICSVVALVVIGGPIYASEERAEPDHDPDLDTSVVWWDWVGALANLGSIVFALSCAPAVLHAYSSMTPQSTRAWRSVATWALVVGACLCYSMGLAGYLSFRDSVDGDILLNFSGAIASVFKTAVVVHLILYIPSEVIVMRHSLYALRGKDVMVAEFGQVAWVTFALLALVVGAMVGLNTVGVAQ 463
BLAST of mRNA_M-pyrifera_M_contig11487.3095.1 vs. uniprot
Match: A0A835Z9L5_9STRA (Transmembrane amino acid transporter protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9L5_9STRA) HSP 1 Score: 134 bits (336), Expect = 4.500e-34 Identity = 77/193 (39.90%), Postives = 113/193 (58.55%), Query Frame = 1
Query: 7 LAVFSFCAISSVVLLVVIGGPIY--GAEERSEPVHDANLDASVTWWDWSGSIAKMGSIVFALSCSPAVLHAYTSLSPRSSRSWRSVAGFAVGIGGGMCYAMGLAGYLSFRDAVDGDILENFSGAVASVFKAVVVVHLILYIPSEVIVLRHSLFALQNHDVMAADFGKVAWVTFAILASIVALMVGLDAAGVAQ 579
L++ AI VV +V+ GP+ G + R+E V ++ +W G + K GS++FA S A++HAY L+PR++++W+ V A+ G MC MGLAGYLSFR+ VDG+IL NF G V K ++V HL+ Y P E +VLRHS+ L + +A TFAI+ +VA+ + LDA GV+
Sbjct: 173 LSILGVAAIVVVVAVVLFYGPVCSEGKQVRAETV------GAINYWSTVGMVQKAGSVIFAFSYPHAIVHAYIGLTPRTTKAWKIVVTGAMSAGAFMCLCMGLAGYLSFREEVDGNILTNFVGWVGDALKILLVAHLVWYTPQEFVVLRHSILRLAKQEPLAMSTALRVGSTFAIIGCLVAICIALDATGVSS 359
BLAST of mRNA_M-pyrifera_M_contig11487.3095.1 vs. uniprot
Match: A0A6V1XUJ0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1XUJ0_HETAK) HSP 1 Score: 129 bits (325), Expect = 4.220e-32 Identity = 72/191 (37.70%), Postives = 116/191 (60.73%), Query Frame = 1
Query: 7 LAVFSFCAISSVVLLVVIGGPIYGAEERSEPVHDANLDASVTWWDWSGSIAKMGSIVFALSCSPAVLHAYTSLSPRSSRSWRSVAGFAVGIGGGMCYAMGLAGYLSFRDAVDGDILENFSGAVASVFKAVVVVHLILYIPSEVIVLRHSLFALQNHDVMAADFGKVAWVTFAILASIVALMVGLDAAGVAQ 579
+++FS AIS+V+++V+ GP GA++R+ ++ W+ SG+ + +GS +FALSC+ A HA+ ++ + +W AV IG GMC +MGLAGYLSFRD +GDIL+NFSG+ K ++++HL+LYIP + +V+RHS+ + +V +T +LA ++ L A GVA+
Sbjct: 208 ISIFSIFAISTVLVVVLFFGPTVGADDRA-------ASGAINWFSLSGTFSSLGSALFALSCAYAAFHAFEAMRRNTGAAWAGATTPAVVIGAGMCTSMGLAGYLSFRDYTEGDILDNFSGSGWDFMKILLIIHLLLYIPIDFVVMRHSVCKIFGWNVDTMHIAPYLVLTAILLAFTAGCVMALYAVGVAE 391
BLAST of mRNA_M-pyrifera_M_contig11487.3095.1 vs. uniprot
Match: A0A6V1M2K4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1M2K4_HETAK) HSP 1 Score: 119 bits (298), Expect = 4.640e-29 Identity = 74/194 (38.14%), Postives = 109/194 (56.19%), Query Frame = 1
Query: 4 WLAVFSFCAISSVVLLVVIGGPIYGAEERSEPVHDANLDASVTWWDWSGSIAKMGSIVFALSCSPAVLHAYTSLSP--RSSRSWRSVAGFAVGIGGGMCYAMGLAGYLSFRDAVDGDILENFSGAVASVFKAVVVVHLILYIPSEVIVLRHSLFALQNHDVMAADFGKVAWVTFAILASIVALMVGLDAAGVAQ 579
+++ S AI++VVL V+I GP G + RSEP+ W G K GS+VFA++C+ A HA+ SL P ++ W V+ A+ +G MC GLAGYL FR + GDIL+NF G FK ++V HLILYIP + +V+RHS + D + G+ VT +L + +++ L AGV++
Sbjct: 75 YVSYLSISAIAAVVLCVLIAGPSEGKQYRSEPI---------LWISVPGMAQKFGSVVFAIACAYAAFHAFVSLRPELQTVGQWDRVSSLAIVVGTLMCAVTGLAGYLCFRSSTSGDILDNFQGPNFYFFKVLLVTHLILYIPLDFVVMRHSFCKVLGTDAIELPTGRYVVVTVGLLTFSLGVVMVLYYAGVSE 259
BLAST of mRNA_M-pyrifera_M_contig11487.3095.1 vs. uniprot
Match: A0A6V2Y555_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2Y555_HETAK) HSP 1 Score: 119 bits (298), Expect = 3.160e-28 Identity = 74/194 (38.14%), Postives = 109/194 (56.19%), Query Frame = 1
Query: 4 WLAVFSFCAISSVVLLVVIGGPIYGAEERSEPVHDANLDASVTWWDWSGSIAKMGSIVFALSCSPAVLHAYTSLSP--RSSRSWRSVAGFAVGIGGGMCYAMGLAGYLSFRDAVDGDILENFSGAVASVFKAVVVVHLILYIPSEVIVLRHSLFALQNHDVMAADFGKVAWVTFAILASIVALMVGLDAAGVAQ 579
+++ S AI++VVL V+I GP G + RSEP+ W G K GS+VFA++C+ A HA+ SL P ++ W V+ A+ +G MC GLAGYL FR + GDIL+NF G FK ++V HLILYIP + +V+RHS + D + G+ VT +L + +++ L AGV++
Sbjct: 211 YVSYLSISAIAAVVLCVLIAGPSEGKQYRSEPI---------LWISVPGMAQKFGSVVFAIACAYAAFHAFVSLRPELQTVGQWDRVSSLAIVVGTLMCAVTGLAGYLCFRSSTSGDILDNFQGPNFYFFKVLLVTHLILYIPLDFVVMRHSFCKVLGTDAIELPTGRYVVVTVGLLTFSLGVVMVLYYAGVSE 395
BLAST of mRNA_M-pyrifera_M_contig11487.3095.1 vs. uniprot
Match: A0A7S3HJ43_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HJ43_9STRA) HSP 1 Score: 103 bits (256), Expect = 2.330e-22 Identity = 70/190 (36.84%), Postives = 106/190 (55.79%), Query Frame = 1
Query: 7 LAVFSFCAISSVVLLVVIGGPIYGAEERSEPVHDANLDASVTWWDWSGSIAKMGSIVFALSCSPAVLHAYTSLS--PRSSRSWRSVAGFAVGIGGGMCYAMGLAGYLSFRDAVDGDILENFSGAVASVFKAVVVVHLILYIPSEVIVLRHSL----FALQNHDVMAADFGKVAWVTFAILASIVALMVGL 558
L++FS AI +V+LLV I GPI + + ++ +D +G + +GSIVF++ C A A+ S R+ +WRSV G AV G MC +MGL GYLSF +G+IL+NF+ VFK +VV+HLILYIP +++R+S+ F ++ + +A + A IV L++GL
Sbjct: 212 LSLFSIAAIVAVLLLVFIAGPIKHSVDHKS--------SNYKLFDLNGMLTSVGSIVFSMECCSANFQAFVSTERKSRNMNTWRSVTGVAVFAGAIMCASMGLVGYLSFGSDTEGEILDNFTQHGYDVFKLMVVIHLILYIPVNFVIMRYSIVKVFFQTRSELLPSATHSIITIGLLAATVGIVLLLLGL 393
BLAST of mRNA_M-pyrifera_M_contig11487.3095.1 vs. uniprot
Match: A0A7S2V5U5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5U5_9STRA) HSP 1 Score: 100 bits (249), Expect = 2.120e-21 Identity = 71/191 (37.17%), Postives = 107/191 (56.02%), Query Frame = 1
Query: 7 LAVFSFCAISSVVLLVVIGGPIYGAEERSEPVHDANLDASVTWWDWSGSIAKMGSIVFALSCSPAVLHAYTSLSPRSSRSWRSVAGFAVGIGGGMCYAMGLAGYLSFRDAVDGDILENFSGAVASVFKAVVVVHLILYIPSEVIVLRHSLFALQNHDVMAADFGKVAWVTFAILASIVALMVGLDAAGVAQ 579
++VFS C V+ LV++ GPI G E + H+ L S+T G + + GS+VFA++ A+ SL ++ W V+ A +G MC+ GL+GYLSFR A +G+IL NFSG A K ++V HL+LYIP + +V+RHSL L N + ++ +LA AL+V L + G+A+
Sbjct: 213 ISVFSICC---VMALVIVYGPIAGREYQ----HERILIFSLT-----GMLTECGSVVFAVTYITGSFFAFNSLELKNQARWPIVSAKASCMGTFMCFITGLSGYLSFRSATNGEILLNFSGGWAYFTKTLLVAHLLLYIPIDFVVMRHSLVKLFNKEAEKLHTAPFIVLSVMLLAVTTALVVFLYSKGLAE 391
BLAST of mRNA_M-pyrifera_M_contig11487.3095.1 vs. uniprot
Match: A0A835Z8W9_9STRA (Aa_trans domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8W9_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 8.430e-17 Identity = 40/91 (43.96%), Postives = 56/91 (61.54%), Query Frame = 1
Query: 136 WDWSGSIAKMGSIVFALSCSPAVLHAYTSLSPRSSRSWRSVAGFAVGIGGGMCYAMGLAGYLSFRDAVDGDILENFSGAVASVFKAVVVVH 408
W+W + GS++FALS +PA LHAY L P + WR V A+ +G +CY G+ GYLSFR A G+ILENF G V+ + ++ +H
Sbjct: 141 WNWLEMFERAGSVIFALSFAPAALHAYMGLVPCTPEQWRKVVSIAIAVGSVVCYTTGIIGYLSFRGATLGNILENFDGVVSDIASVLLELH 231
BLAST of mRNA_M-pyrifera_M_contig11487.3095.1 vs. uniprot
Match: A0A059X054_9BACT (Transmembrane amino acid transporter protein n=1 Tax=uncultured bacterium TaxID=77133 RepID=A0A059X054_9BACT) HSP 1 Score: 59.3 bits (142), Expect = 4.430e-8 Identity = 32/76 (42.11%), Postives = 51/76 (67.11%), Query Frame = 1
Query: 307 LAGYLSFRDAVDGDILENFSGAVASVFKAVVVVHLILYIPSEVIVLRHSLFALQNHDV--MAADFGKVAWVTFAIL 528
+AGYLSF+ G IL+NF+G + +FK ++++HL+LYIP + + +R+SL L + + +DFG V VT A+L
Sbjct: 26 VAGYLSFKTDTQGIILDNFTGNYSDIFKIMLIIHLVLYIPVDFMTMRYSLVKLSGNPTGQVKSDFGHVL-VTIALL 100 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11487.3095.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11487.3095.1 >prot_M-pyrifera_M_contig11487.3095.1 ID=prot_M-pyrifera_M_contig11487.3095.1|Name=mRNA_M-pyrifera_M_contig11487.3095.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=193bp RWLAVFSFCAISSVVLLVVIGGPIYGAEERSEPVHDANLDASVTWWDWSGback to top mRNA from alignment at M-pyrifera_M_contig11487:421..8414+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11487.3095.1 ID=mRNA_M-pyrifera_M_contig11487.3095.1|Name=mRNA_M-pyrifera_M_contig11487.3095.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7994bp|location=Sequence derived from alignment at M-pyrifera_M_contig11487:421..8414+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11487:421..8414+ >mRNA_M-pyrifera_M_contig11487.3095.1 ID=mRNA_M-pyrifera_M_contig11487.3095.1|Name=mRNA_M-pyrifera_M_contig11487.3095.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1158bp|location=Sequence derived from alignment at M-pyrifera_M_contig11487:421..8414+ (Macrocystis pyrifera P11B4 male)back to top |