mRNA_M-pyrifera_M_contig1148.3076.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig1148.3076.1
Unique NamemRNA_M-pyrifera_M_contig1148.3076.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig1148.3076.1 vs. uniprot
Match: A0A392M193_9FABA (Copia-type polyprotein (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392M193_9FABA)

HSP 1 Score: 171 bits (434), Expect = 1.350e-42
Identity = 139/473 (29.39%), Postives = 220/473 (46.51%), Query Frame = 1
Query:   22 PKRALVEVTRPLEPVYTDISGPV--ASRASNSYATKFTDNYTHLKSVYFLSKKNEAIDALTNYTQGVVIPSGHLLQRLRSDRGVEYTGLEYREHCLHIGIKQEFASMTTLQHNGISEREWASLRNMYRCFPAEAGAPKFLWQEAFRMAVYLESHLPRWEAKRLSR----CGTVEHFHHSSTFEPLVRVH-QERYAKKLTMKAWEGRMIGCGNDSKTYRTWE-SGTKIVESRNVTFIETLPGKL-NTLDYDHHDSDGDTFLDSETSSISLGTQEEIPEAKKDAQPDTDVSQSRGTSSDSDEESDSDLFIRRLSTTLILSAIRSLKHLPRPKSHSRQE-----TFGSCGISSSFGVASIYGKGA--------CVSKHEVYELVPAPKGRKISGSSWVFKVKPDGL-----YKSRFCAQGFSQVAGTFFGSTNAPVCRIPSARIVLENAASRDWNVIQLDVQTTFLQSEMKEEVYV 1359
            PK+A    T  L+ V++DI GP+   S     Y   FTD+Y+    V FL +K++A D+  N+   V   S  ++Q LR+DRG EYT   + E C   GIK++  +  T Q NG+SER+  +L N+ R   +    PK  W EA + A Y+ +  P    K ++            HH   F  +  VH  +   KKL  K+ +   +G  ++SK Y+ +E S  KI+ SR+V F E+      N   ++  +   D   D ET++I+     ++P  + D   D     +    +D   E ++ L    L         R    +   ++   QE      + SC   +++  AS   +           + K+  +EL   P G  + G  W++K K +       YK+R  A+G++Q  G  +    APV R  + R VL  AAS+ WNV QLDV++ FL  E+ E++YV
Sbjct:  270 PKQAKWRATAKLQLVHSDICGPINPTSNGGKRYFITFTDDYSRKTWVNFLKEKSDAFDSFKNFKVMVEKESNCMIQTLRTDRGGEYTSNAFNEFCNSQGIKRQLTAAYTPQQNGVSERKNRTLLNIVRSMLSSRNVPKRFWPEAVKWATYVMNRCPTLSVKNMTPEEAWSDIKPSVHHFRVFGCIAYVHVADNQRKKLDNKSIKCVFLGISDESKAYKLYEPSERKIIVSRDVVFEESKGWDWENKEKHEKEEVKNDLSDDEETAAIT----NDVP-TQTDNGFDEHNDSTEAEDNDQSSEEENILDREELPPRTRKLPARLKDFVIGSEAEEEQELHNLAVYSSCEDPNTYDEASKSEEWRKAMDMEIESIEKNNTWELTSLPTGSNVIGVKWIYKTKYNEKGQIEKYKARLVAKGYTQRYGIDYNEVFAPVARWDTIRTVLALAASKGWNVFQLDVKSAFLHGELTEDIYV 737          
BLAST of mRNA_M-pyrifera_M_contig1148.3076.1 vs. uniprot
Match: A0A6H5L6R7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R7_9PHAE)

HSP 1 Score: 160 bits (405), Expect = 4.780e-39
Identity = 138/451 (30.60%), Postives = 205/451 (45.45%), Query Frame = 1
Query:   82 GPVASRASNS--YATKFTDNYTHLKSVYFLSKKNEAIDALTNYTQGVVIPSGHLLQRLRSDRGVEYTGLEYREHCLHIGIKQEFASMTTLQHNGISEREWASLRNMYRCFPAEAGAPKFLWQEAFRMAVYLESHLPRWEAKRLSRC----GTVEHFHHSSTFEPLVRVHQERYAKKLTMKAWEGRMIGCGNDSKTYRTWE----SGTKIVESRNVTFIETLPGKLNTLDYDH----HDSDGDTFLDSETSSISLGTQEEIPEAKKDA----QPDTDVSQSRGTSSDSDEESDSDLFIRRLSTTLI--LSAIRSLKHLPRP--KSHSRQETFGSCGISSSFGVASIYGKGACVSKHEVYELVP---APKGRKISGSSWVFKVKPDGLYKSRFCAQGFSQVAGTFFGSTNAPVCRIPSARIVLENAASRDWNVIQLDVQTTFLQSEMKEEVYV 1359
            GP++  A     Y  K  D  T  K  + +  K +AI AL  + Q +V+P+   L  LR D+G E T  E+RE+CL IG K E+AS  T Q  G +ER   +L  M RC   ++G P+FLW +  + A YL + +P      ++      G   +  H         VH E + + L  K WE R++         +       +G   V  R+ T +    G  +T   D     + S  DT +  +T          I E ++ A     P  DV          +E  D   +    + T I   S    +K +P    K+    ET            A+   +   +   +VY+LVP    P G  + GS WVFKVKP+  +K+R  A+G++QV G   G T APVCR+ S R+V   AA +D +VIQLDV+T FL ++++E V+V
Sbjct:    2 GPISLPALGGFRYVNKLVDEKTKWKETFLMKTKRDAIKALQLFNQSLVVPTRFRLDCLRGDKGTECTCREFREYCLQIGAKLEYASTNTPQQMGANERAGRTLAAMVRCILTDSGLPQFLWGQLMQTAAYLSNRVPHAALGNITPYKALYGKDANLGHLRAIGARAFVHVETHTRNLDSKVWESRIVNFIETPYARQDLTPSNMAGNDEVGLRSSTRVPDHAGMRSTAKVDKPSLTNQSGRDTAVKPKT----------IRELRRLALYTDTPLADVGHR-------EERFDFLEYAFVANNTQIHGRSEGEKVKTIPNTCKKAMELPET--------KLWKAATDKEIKSLQDLKVYKLVPRTDVPLGHNVIGSKWVFKVKPENTHKARLVAKGWNQVPGRDCGGTFAPVCRLQSIRMVFAIAAEKDLDVIQLDVKTAFLYADIEENVFV 427          
BLAST of mRNA_M-pyrifera_M_contig1148.3076.1 vs. uniprot
Match: A0A4Y1RH27_PRUDU (Multidrug resistance-associated protein 9 n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RH27_PRUDU)

HSP 1 Score: 160 bits (405), Expect = 8.740e-39
Identity = 138/484 (28.51%), Postives = 232/484 (47.93%), Query Frame = 1
Query:    1 KSKQQNHPKRALVEVTRPLEPVYTDISGPV--ASRASNSYATKFTDNYTHLKSVYFLSKKNEAIDALTNYTQGVVIPSGHLLQRLRSDRGVEYTGLEYREHCLHIGIKQEFASMTTLQHNGISEREWASLRNMYRCFPAEAGAPKFLWQEAFRMAVYLESHLPRWEAKRLSRCGTVEHF-------HHSSTFEPLVRVH-QERYAKKLTMKAWEGRMIGCGNDSKTYRTWESGT-KIVESRNVTFIETLPGKLNTLDYDHHDSDGDTFLDSETSSISLGTQEEIPEAKKDAQPDTDVSQSRGTSSDSDEE---SDSDLFIRRLSTTLILSAIRSLKHLPRPKSHSRQETFGSCGIS----SSFGVAS--------IYGKGACVSKHEVYELVPAPKGRKISGSSWVFKVKP--DGLY---KSRFCAQGFSQVAGTFFGSTNAPVCRIPSARIVLENAASRDWNVIQLDVQTTFLQSEMKEEVYV 1359
            K  ++  P+ A+   + PLE +++DI GP+   +++ N +   F D+ T +  VYFL  K++A+     +   V + SG+ L++LRSDRG EYT +E+   C ++GI+++  +  T Q NG++ER+  ++  M +C   E   P   W EA   +VY+   L R   K LS+    E +        H   F  L   H  ++  +KL + +     +G G+  K YR +   T K++ SR+V F E      NT                + +S+++   E I E ++ A+         G+S + +E+   ++       +S     +  +++ H P  K  S  E +  C +      SF  A+        +  +   + K+  +ELV  P  + I G  W++K K   DG     K+R  A+G+SQ  G  F  T APV R+ + R ++  AA R+WN+ QLDV++ FL   + EEVYV
Sbjct:  512 KQSREAFPREAISRASIPLELIHSDICGPMQTTTKSGNRFFLTFIDDCTRMCWVYFLRHKSDALCVFKKFKATVELQSGYKLKQLRSDRGGEYTSVEFERFCDNVGIERQLTTPYTPQQNGVAERKNRTIVEMAKCLMLEKKIPLDFWAEAVNTSVYI---LNRCPTKALSKKTPFEAYGGRKPGIKHLKVFGSLCYAHVPKQQRQKLDLASKRCIFLGYGSCEKGYRLYNIETEKVIISRDVIFSENECWDWNT---------------KKETSVNIQLTE-IREEEQGAE---------GSSYEFEEQLEVNEVPTLNTEISNQEREAGSQNVDHTPL-KYKSIAEIYEKCNMCIVEPESFEEAAKDDSWKNAMEAEITMIEKNNTWELVNRPFDKPIIGVKWIYKTKLNLDGSVQKNKARLVAKGYSQKPGIDFNETFAPVARLDTVRTLVAVAAQRNWNLFQLDVKSAFLNGVLNEEVYV 966          
BLAST of mRNA_M-pyrifera_M_contig1148.3076.1 vs. uniprot
Match: A0A6H5K500_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K500_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 8.970e-37
Identity = 96/252 (38.10%), Postives = 134/252 (53.17%), Query Frame = 1
Query:    1 KSKQQNHPKRALVEVTRPLEPVYTDISGPVASRA-----SNSYATKFTDNYTHLKSVYFLSKKNEAIDALTNYTQGVVIPSGHLLQRLRSDRGVEYTGLEYREHCLHIGIKQEFASMTTLQHNGISEREWASLRNMYRCFPAEAGAPKFLWQEAFRMAVYLESHLPRWEAKRLSRCGTVEHFHHSSTFEPLVRV-------HQERYAKKLTMKAWEGRMIGCGNDSKTYRTWE-SGTKIVESRNVTFIETLP 717
            K KQ  HPK++  E++RP + V  D  GPV   A     S  YA K TD+YT +K VY L KK++  +A+  Y   V    G+ ++ +R D+G E TG E+R++C +  IK E+A+  T Q  G+SER+  +L  + RC   +   P  +W E    A YL +  P      L         H+ S     +RV       H ERY KKL  +A+EG++ G G DS+TYR    S   +VESRNVTFIE+ P
Sbjct:   84 KHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPH---SALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIESPP 332          
BLAST of mRNA_M-pyrifera_M_contig1148.3076.1 vs. uniprot
Match: A0A6H5JJR8_9PHAE (Integrase catalytic domain-containing protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR8_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 1.350e-36
Identity = 96/252 (38.10%), Postives = 134/252 (53.17%), Query Frame = 1
Query:    1 KSKQQNHPKRALVEVTRPLEPVYTDISGPVASRA-----SNSYATKFTDNYTHLKSVYFLSKKNEAIDALTNYTQGVVIPSGHLLQRLRSDRGVEYTGLEYREHCLHIGIKQEFASMTTLQHNGISEREWASLRNMYRCFPAEAGAPKFLWQEAFRMAVYLESHLPRWEAKRLSRCGTVEHFHHSSTFEPLVRV-------HQERYAKKLTMKAWEGRMIGCGNDSKTYRTWE-SGTKIVESRNVTFIETLP 717
            K KQ  HPK++  E++RP + V  D  GPV   A     S  YA K TD+YT +K VY L KK++  +A+  Y   V    G+ ++ +R D+G E TG E+R++C +  IK E+A+  T Q  G+SER+  +L  + RC   +   P  +W E    A YL +  P      L         H+ S     +RV       H ERY KKL  +A+EG++ G G DS+TYR    S   +VESRNVTFIE+ P
Sbjct:   84 KHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPH---SALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIESPP 332          
BLAST of mRNA_M-pyrifera_M_contig1148.3076.1 vs. uniprot
Match: A0A6H5KCT3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCT3_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 1.390e-36
Identity = 96/252 (38.10%), Postives = 134/252 (53.17%), Query Frame = 1
Query:    1 KSKQQNHPKRALVEVTRPLEPVYTDISGPVASRA-----SNSYATKFTDNYTHLKSVYFLSKKNEAIDALTNYTQGVVIPSGHLLQRLRSDRGVEYTGLEYREHCLHIGIKQEFASMTTLQHNGISEREWASLRNMYRCFPAEAGAPKFLWQEAFRMAVYLESHLPRWEAKRLSRCGTVEHFHHSSTFEPLVRV-------HQERYAKKLTMKAWEGRMIGCGNDSKTYRTWE-SGTKIVESRNVTFIETLP 717
            K KQ  HPK++  E++RP + V  D  GPV   A     S  YA K TD+YT +K VY L KK++  +A+  Y   V    G+ ++ +R D+G E TG E+R++C +  IK E+A+  T Q  G+SER+  +L  + RC   +   P  +W E    A YL +  P      L         H+ S     +RV       H ERY KKL  +A+EG++ G G DS+TYR    S   +VESRNVTFIE+ P
Sbjct:   84 KHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPH---SALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIESPP 332          
BLAST of mRNA_M-pyrifera_M_contig1148.3076.1 vs. uniprot
Match: A0A5H2Y6Z9_PRUDU (Integrase catalytic domain-containing protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A5H2Y6Z9_PRUDU)

HSP 1 Score: 151 bits (381), Expect = 1.420e-36
Identity = 139/487 (28.54%), Postives = 221/487 (45.38%), Query Frame = 1
Query:    1 KSKQQNHPKRALVEVTRPLEPVYTDISGPVAS--RASNSYATKFTDNYTHLKSVYFLSKKNEAIDALTNYTQGVVIPSGHLLQRLRSDRGVEYTGLEYREHCLHIGIKQEFASMTTLQHNGISEREWASLRNMYRCFPAEAGAPKFLWQEAFRMAVYLESHLPRWEAKRLSRCGTVEHFH-------HSSTFEPLVRVH---QERYAKKLTMKAWEGRMIGCGNDSKTYRTWESGTKIVE-SRNVTFIETLPGKLNT---LDYDHHDSDGDTFLDSETSSISLGTQEEIPEAKKDAQPDTDVSQSRGTSSDSDEESDSDLFIRRLSTTLILSAIRSLKHLPRPKSHSRQETFGSCGIS----SSFGVA---SIYGKGAC-----VSKHEVYELVPAPKGRKISGSSWVFKVKP--DGL---YKSRFCAQGFSQVAGTFFGSTNAPVCRIPSARIVLENAASRDWNVIQLDVQTTFLQSEMKEEVYVR 1362
            K+ + +  K      ++PLE +++DI GP+ +     N Y   F D++T +  V+FL  K++A +    +   V + SGH +++LRSDRG EYT L++ + C  +G++++     + Q NG++ER+  ++  M R    E   P   W EA   AVYL++  P      L      E F        H   F  L  +H   Q+R+  KL     +G  +G G   K YR     T+ +E SR+V F E       T   L       DG +   S+  S     Q++I ++  + Q          TSSD     DS             + +    H P+ K  +  E +  C +S     +F  A     +GK        + K+  +ELV  P  + I G  W+FK+K   DG    YK+R  A+G++Q  G  F  T APV R+ + R ++  AA + W + QLDV++ FL   +  +V V+
Sbjct:   91 KNNRSSFDKEGAWRASQPLELIHSDICGPMQTITPGGNRYFLTFIDDHTRMCWVFFLQHKSQAFNIFKRFKSMVELQSGHQIKKLRSDRGGEYTSLDFSKFCEEMGLERQLTVGYSPQQNGVAERKNRTVMEMARAMIHEKKIPLKFWAEAVNTAVYLQNRSP---TSALDNSTPFEKFSGRKPGVKHLRIFGSLCYIHIPTQKRH--KLEDTGEKGVFVGYGVCEKGYRVLNLRTQKIELSRSVIFDEEAMWNWETSEALQIPMSWGDGASSTISDLDSEPNLLQQQIVQSPMETQ----------TSSDVHATQDS-------------APLEPYDHTPK-KWKNLSEVYAQCKMSIIEPENFEEAVKDEAWGKAMTKEILMIEKNSTWELVDRPSSKPIVGVKWIFKIKLNLDGSTQKYKARLVAKGYTQKPGIDFNETFAPVARLDTIRTLIALAAQKGWKLWQLDVKSAFLNGVVFTKVQVK 548          
BLAST of mRNA_M-pyrifera_M_contig1148.3076.1 vs. uniprot
Match: A0A438CJV5_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CJV5_VITVI)

HSP 1 Score: 152 bits (385), Expect = 1.630e-36
Identity = 132/472 (27.97%), Postives = 214/472 (45.34%), Query Frame = 1
Query:   22 PKRALVEVTRPLEPVYTDISGPV--ASRASNSYATKFTDNYTHLKSVYFLSKKNEAIDALTNYTQGVVIPSGHLLQRLRSDRGVEYTGLEYREHCLHIGIKQEFASMTTLQHNGISEREWASLRNMYRCFPAEAGAPKFLWQEAFRMAVYLESHLPRWEAKRLSR----CGTVEHFHHSSTFEPLVRVH-QERYAKKLTMKAWEGRMIGCGNDSKTYRTWES-GTKIVESRNVTFIETL---------PGKLNTLDYDHHDSDG---DTFLDSETS-SISLGTQEEIPEAKKDAQPDTDVSQSRGTSSDSDEESDSDLFIRRLSTTLILSAIRSLKHLPRPKSHSRQETFGSCGISSSFGVASIYGKGACVSKHEVYELVPAPKGRKISGSSWVFKVKPD-----GLYKSRFCAQGFSQVAGTFFGSTNAPVCRIPSARIVLENAASRDWNVIQLDVQTTFLQSEMKEEVYV 1359
            PKR+L   ++ L+ V+ DI GP+   S +   Y   F D+Y+    +YFL++K+EA     NY   V   +G  +  LR+DRG E+T LE+   C   GI ++  +  T Q NG++ER+  ++ NM R   +E   PK  W EA    V++ +  P    K ++      G   +  +   F  +  VH  +   KKL  K+++  ++G   +SK YR ++    KIV SR+V F E             +L+ L++   + +G   +  +  E+S S   G    +P   +D         S G  S+ D E +  LF      T     ++S K                         A++  +   + K+  +EL   P+G K  G  WVFK K +        K+R  A+G++Q  G  +    APV R  + R+V+   A   W+V QLDV++ FL  E+ E V++
Sbjct:   29 PKRSLWRASQRLQLVHADICGPIKPVSNSKKRYLISFIDDYSRKVWIYFLTEKSEAFTTFKNYKNLVEKETGAFICCLRTDRGGEFTSLEFNAFCKTNGISRQLTAAYTPQQNGVAERKNRTIMNMVRSMLSEKQVPKNFWPEAVNWTVHVLNRSPTLAVKGVTLEEAWSGVKPNVDYFRVFGCIGHVHVPDNKRKKLDDKSFQCVLLGVSEESKAYRLYDPVSKKIVVSRDVVFEEDKCWNWGRSNEEVRLDVLEWGDSNEEGSEDEQGVSGESSPSSQQGRNRRVPFWMEDYV-------SGGEFSEGDVEPNLVLFTSTADPTTFEEVVQSSKWR-----------------------ATMDLEIEAIEKNGTWELTDLPEGVKKIGVKWVFKTKLNENGKVDKCKARLVAKGYAQQHGIDYTEVFAPVARWDTIRMVIALTARNGWSVYQLDVKSAFLHGELNEAVFI 470          
BLAST of mRNA_M-pyrifera_M_contig1148.3076.1 vs. uniprot
Match: A0A6H5JRJ1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ1_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 1.790e-36
Identity = 97/252 (38.49%), Postives = 134/252 (53.17%), Query Frame = 1
Query:    1 KSKQQNHPKRALVEVTRPLEPVYTDISGPVASRA-----SNSYATKFTDNYTHLKSVYFLSKKNEAIDALTNYTQGVVIPSGHLLQRLRSDRGVEYTGLEYREHCLHIGIKQEFASMTTLQHNGISEREWASLRNMYRCFPAEAGAPKFLWQEAFRMAVYLESHLPRWEAKRLSRCGTVEHFHHSSTFEPLVRV-------HQERYAKKLTMKAWEGRMIGCGNDSKTYRTWE-SGTKIVESRNVTFIETLP 717
            K KQ  HPK++  E++RP + V  D  GPV   A     S  YA K TD+YT +K VY L KK+   +A+  Y   V    G+ ++ +R D+G E TG E+R++C +  IK E+A+  T Q  G+SER+  +L  + RC   +   P  +W E    A YL +  P      L         H+ S     +RV       HQERY KKL  +A+EG++ G G DS+TYR    S   +VESRNVTFIE+ P
Sbjct:   84 KYKQSPHPKQSTRELSRPGQLVVIDNVGPVNPPAKYNGGSFPYACKITDDYTKVKEVYLLRKKSNTTEAVHTYNICVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPH---SALGGATPYSKLHNKSPDLSRLRVIGARAFVHQERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIESPP 332          
BLAST of mRNA_M-pyrifera_M_contig1148.3076.1 vs. uniprot
Match: A0A2K3MV45_TRIPR (Copia-type polyprotein n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MV45_TRIPR)

HSP 1 Score: 152 bits (383), Expect = 6.550e-36
Identity = 133/486 (27.37%), Postives = 207/486 (42.59%), Query Frame = 1
Query:   22 PKRALVEVTRPLEPVYTDISGPV--ASRASNSYATKFTDNYTHLKSVYFLSKKNEAIDALTNYTQGVVIPSGHLLQRLRSDRGVEYTGLEYREHCLHIGIKQEFASMTTLQHNGISEREWASLRNMYRCFPAEAGAPKFLWQEAFRMAVYLESHLPRWEAKRLSR----CGTVEHFHHSSTFEPLVRVH-QERYAKKLTMKAWEGRMIGCGNDSKTYRTWES-GTKIVESRNVTFIETLPGKLNTLDYDHHDSDGDTFLDSETSSISLGTQEEIPEAKKDAQPDTDVSQSRGTSSDSDEESDSDLFIRRLSTTLILSAIRSLKHLPRPK-------------SHSRQETFGSCGISSSFGVASIYGKG--------------ACVSKHEVYELVPAPKGRKISGSSWVFKVKPDGL-----YKSRFCAQGFSQVAGTFFGSTNAPVCRIPSARIVLENAASRDWNVIQLDVQTTFLQSEMKEEVYV 1359
            PK+A    T+ LE V++DI GP+   S   N Y    TD+Y+     Y +S+K+ A +    +   V   SG+ +  LR+DRG E+T   +   C   GIK++  +  T Q NG+SER+  +L NM R   A    PK  W EA + A Y+ +  P    K  +      G     HH   F  L  VH  +    KL  K+ +   +G   +SK Y+ ++    KI+ SR+V F E      N              L S+ + I    +  +     ++  + D S+  G   +++EE                         PRPK             +   QE   +  + S+ G  + Y +                 +  ++ ++L   P+G K  G  W++K K +       YK+R  A+G+SQ  G  +    APV R  + R +L  AAS+ W V QLDV++ FL  E+ E+VYV
Sbjct:  478 PKQANWRATKKLELVHSDICGPINPTSNGGNRYFMTLTDDYSRKTWTYVMSEKSNAFNVFKTFKALVENESGYKIVCLRTDRGGEFTSEIFNNFCSENGIKRQLTTAYTPQQNGVSERKNRTLLNMVRSMLAGRNVPKKFWPEAVKWATYVLNRSPTLSVKDSTPEEAWSGLKPSVHHFKIFGCLAYVHVPDAKRTKLDAKSLKCVHLGVSEESKAYKLYDPVNKKIIVSRDVVFEEGTEWNWNDKKXXXXXXXXXXDLISDETDIEEEAKNGVNTGNNESSSEYD-SEQEGNDYETEEELP-----------------------PRPKKKPGYLNDYVTGLTDEEQEQMNNLAVFSTNGDPTTYDEAHKQEVWRKAMDQEIESIENNKTWKLTSLPQGAKTIGVKWIYKTKYNEKGEVEKYKARLVAKGYSQQYGIDYNEVFAPVARWDTIRTLLCIAASKGWEVHQLDVKSAFLHGELTEDVYV 939          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1148.3076.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A392M193_9FABA1.350e-4229.39Copia-type polyprotein (Fragment) n=1 Tax=Trifoliu... [more]
A0A6H5L6R7_9PHAE4.780e-3930.60Integrase catalytic domain-containing protein n=1 ... [more]
A0A4Y1RH27_PRUDU8.740e-3928.51Multidrug resistance-associated protein 9 n=1 Tax=... [more]
A0A6H5K500_9PHAE8.970e-3738.10Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JJR8_9PHAE1.350e-3638.10Integrase catalytic domain-containing protein n=11... [more]
A0A6H5KCT3_9PHAE1.390e-3638.10Integrase catalytic domain-containing protein n=1 ... [more]
A0A5H2Y6Z9_PRUDU1.420e-3628.54Integrase catalytic domain-containing protein n=1 ... [more]
A0A438CJV5_VITVI1.630e-3627.97Retrovirus-related Pol polyprotein from transposon... [more]
A0A6H5JRJ1_9PHAE1.790e-3638.49Integrase catalytic domain-containing protein n=1 ... [more]
A0A2K3MV45_TRIPR6.550e-3627.37Copia-type polyprotein n=1 Tax=Trifolium pratense ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1148contigM-pyrifera_M_contig1148:22438..23905 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score152.1
Seed ortholog evalue6.1e-34
Seed eggNOG ortholog7029.ACYPI067527-PA
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs38VJ1@33154,3CB3U@33208,3DT1J@33213,3EE1Z@33342,3SW1M@50557,4294G@6656,COG2801@1,KOG0017@2759
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-27_002870.2
COG Functional cat.L
Best tax levelParaneoptera
Best eggNOG OGNA|NA|NA
Exons2
Model size1365
Cds size1365
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815663.9270825-CDS-M-pyrifera_M_contig1148:22437..233461622815663.9270825-CDS-M-pyrifera_M_contig1148:22437..23346Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1148 22438..23346 +
1692277511.0537083-CDS-M-pyrifera_M_contig1148:22437..233461692277511.0537083-CDS-M-pyrifera_M_contig1148:22437..23346Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1148 22438..23346 +
1622815663.94205-CDS-M-pyrifera_M_contig1148:23449..239051622815663.94205-CDS-M-pyrifera_M_contig1148:23449..23905Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1148 23450..23905 +
1692277511.0641613-CDS-M-pyrifera_M_contig1148:23449..239051692277511.0641613-CDS-M-pyrifera_M_contig1148:23449..23905Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1148 23450..23905 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1148.3076.1prot_M-pyrifera_M_contig1148.3076.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig1148 22438..23905 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig1148.3076.1

>prot_M-pyrifera_M_contig1148.3076.1 ID=prot_M-pyrifera_M_contig1148.3076.1|Name=mRNA_M-pyrifera_M_contig1148.3076.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=455bp
KSKQQNHPKRALVEVTRPLEPVYTDISGPVASRASNSYATKFTDNYTHLK
SVYFLSKKNEAIDALTNYTQGVVIPSGHLLQRLRSDRGVEYTGLEYREHC
LHIGIKQEFASMTTLQHNGISEREWASLRNMYRCFPAEAGAPKFLWQEAF
RMAVYLESHLPRWEAKRLSRCGTVEHFHHSSTFEPLVRVHQERYAKKLTM
KAWEGRMIGCGNDSKTYRTWESGTKIVESRNVTFIETLPGKLNTLDYDHH
DSDGDTFLDSETSSISLGTQEEIPEAKKDAQPDTDVSQSRGTSSDSDEES
DSDLFIRRLSTTLILSAIRSLKHLPRPKSHSRQETFGSCGISSSFGVASI
YGKGACVSKHEVYELVPAPKGRKISGSSWVFKVKPDGLYKSRFCAQGFSQ
VAGTFFGSTNAPVCRIPSARIVLENAASRDWNVIQLDVQTTFLQSEMKEE
VYVR*
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mRNA from alignment at M-pyrifera_M_contig1148:22438..23905+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig1148.3076.1 ID=mRNA_M-pyrifera_M_contig1148.3076.1|Name=mRNA_M-pyrifera_M_contig1148.3076.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1468bp|location=Sequence derived from alignment at M-pyrifera_M_contig1148:22438..23905+ (Macrocystis pyrifera P11B4 male)
AAAAGCAAGCAGCAGAACCACCCAAAGAGAGCGCTTGTTGAAGTGACACG GCCTCTAGAGCCAGTGTACACAGATATATCCGGGCCTGTAGCATCTAGAG CAAGCAATAGCTATGCGACCAAATTCACTGACAACTACACGCATCTAAAG TCGGTGTATTTTCTCAGCAAGAAAAACGAGGCTATAGACGCCTTAACAAA CTATACCCAAGGCGTGGTGATTCCGTCTGGGCATCTACTTCAACGTCTTC GCTCGGATCGTGGGGTCGAGTATACCGGACTGGAGTATCGAGAGCACTGC CTCCATATCGGAATCAAGCAGGAGTTTGCGTCAATGACTACACTGCAACA TAACGGGATTTCAGAGCGCGAGTGGGCATCTCTGCGGAACATGTATAGAT GTTTTCCGGCCGAGGCAGGTGCTCCGAAATTTCTCTGGCAAGAGGCCTTC CGCATGGCAGTTTATCTAGAGTCCCATCTACCCCGCTGGGAGGCAAAACG CCTTTCTCGATGTGGCACGGTGGAACACTTCCATCACTCCAGCACCTTCG AACCTTTGGTGCGCGTGCATCAAGAGCGATACGCCAAGAAGCTAACTATG AAGGCATGGGAAGGGCGCATGATAGGTTGCGGGAATGACTCAAAGACATA CCGTACCTGGGAATCTGGAACCAAGATCGTCGAGTCCCGAAATGTTACGT TCATCGAGACTCTACCTGGTAAGCTCAACACTCTTGACTACGATCACCAC GACAGCGATGGCGACACCTTTCTCGATTCGGAGACGTCATCTATATCGCT TGGTACGCAGGAGGAGATACCAGAAGCAAAAAAAGACGCCCAACCGGACA CCGATGTCAGCCAGAGTCGGGGCACATCAAGCGACAGCGACGAAGAAAGT GATAGCGACGTTGACAGTCAACCATTCGAAGCGGCAAACGCAAAATGAAT CTCACGCCAACTGAGGCAACCCAGAGACTACAGCGTGGGACCTGAATCGG CCAAATTAACAGCTATTTATCCGTCGACTCTCGACTACGCTTATATTATC GGCCATCCGCTCATTGAAACACCTACCACGTCCTAAGTCTCATTCACGCC AAGAAACCTTCGGAAGCTGTGGCATCAGCTCAAGCTTCGGAGTGGCAAGT ATCTATGGAAAGGGAGCTTGCGTGTCGAAACACGAAGTCTACGAGTTGGT TCCTGCACCAAAAGGGCGCAAGATTAGCGGCTCAAGTTGGGTGTTTAAGG TGAAGCCTGACGGTCTTTATAAGTCTCGGTTCTGTGCACAAGGTTTCTCT CAGGTAGCTGGAACATTTTTTGGAAGCACAAACGCCCCAGTCTGTCGCAT ACCGAGTGCCCGCATTGTGTTGGAGAATGCTGCCAGTCGCGATTGGAATG TCATCCAGCTCGATGTACAGACAACATTTCTTCAGAGTGAGATGAAAGAA GAGGTATATGTGAGATAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig1148:22438..23905+

>mRNA_M-pyrifera_M_contig1148.3076.1 ID=mRNA_M-pyrifera_M_contig1148.3076.1|Name=mRNA_M-pyrifera_M_contig1148.3076.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2730bp|location=Sequence derived from alignment at M-pyrifera_M_contig1148:22438..23905+ (Macrocystis pyrifera P11B4 male)
AAAAGCAAGCAGCAGAACCACCCAAAGAGAGCGCTTGTTGAAGTGACACG
GCCTCTAGAGCCAGTGTACACAGATATATCCGGGCCTGTAGCATCTAGAG
CAAGCAATAGCTATGCGACCAAATTCACTGACAACTACACGCATCTAAAG
TCGGTGTATTTTCTCAGCAAGAAAAACGAGGCTATAGACGCCTTAACAAA
CTATACCCAAGGCGTGGTGATTCCGTCTGGGCATCTACTTCAACGTCTTC
GCTCGGATCGTGGGGTCGAGTATACCGGACTGGAGTATCGAGAGCACTGC
CTCCATATCGGAATCAAGCAGGAGTTTGCGTCAATGACTACACTGCAACA
TAACGGGATTTCAGAGCGCGAGTGGGCATCTCTGCGGAACATGTATAGAT
GTTTTCCGGCCGAGGCAGGTGCTCCGAAATTTCTCTGGCAAGAGGCCTTC
CGCATGGCAGTTTATCTAGAGTCCCATCTACCCCGCTGGGAGGCAAAACG
CCTTTCTCGATGTGGCACGGTGGAACACTTCCATCACTCCAGCACCTTCG
AACCTTTGGTGCGCGTGCATCAAGAGCGATACGCCAAGAAGCTAACTATG
AAGGCATGGGAAGGGCGCATGATAGGTTGCGGGAATGACTCAAAGACATA
CCGTACCTGGGAATCTGGAACCAAGATCGTCGAGTCCCGAAATGTTACGT
TCATCGAGACTCTACCTGGTAAGCTCAACACTCTTGACTACGATCACCAC
GACAGCGATGGCGACACCTTTCTCGATTCGGAGACGTCATCTATATCGCT
TGGTACGCAGGAGGAGATACCAGAAGCAAAAAAAGACGCCCAACCGGACA
CCGATGTCAGCCAGAGTCGGGGCACATCAAGCGACAGCGACGAAGAAAGT
GATAGCGACAAAAGCAAGCAGCAGAACCACCCAAAGAGAGCGCTTGTTGA
AGTGACACGGCCTCTAGAGCCAGTGTACACAGATATATCCGGGCCTGTAG
CATCTAGAGCAAGCAATAGCTATGCGACCAAATTCACTGACAACTACACG
CATCTAAAGTCGGTGTATTTTCTCAGCAAGAAAAACGAGGCTATAGACGC
CTTAACAAACTATACCCAAGGCGTGGTGATTCCGTCTGGGCATCTACTTC
AACGTCTTCGCTCGGATCGTGGGGTCGAGTATACCGGACTGGAGTATCGA
GAGCACTGCCTCCATATCGGAATCAAGCAGGAGTTTGCGTCAATGACTAC
ACTGCAACATAACGGGATTTCAGAGCGCGAGTGGGCATCTCTGCGGAACA
TGTATAGATGTTTTCCGGCCGAGGCAGGTGCTCCGAAATTTCTCTGGCAA
GAGGCCTTCCGCATGGCAGTTTATCTAGAGTCCCATCTACCCCGCTGGGA
GGCAAAACGCCTTTCTCGATGTGGCACGGTGGAACACTTCCATCACTCCA
GCACCTTCGAACCTTTGGTGCGCGTGCATCAAGAGCGATACGCCAAGAAG
CTAACTATGAAGGCATGGGAAGGGCGCATGATAGGTTGCGGGAATGACTC
AAAGACATACCGTACCTGGGAATCTGGAACCAAGATCGTCGAGTCCCGAA
ATGTTACGTTCATCGAGACTCTACCTGGTAAGCTCAACACTCTTGACTAC
GATCACCACGACAGCGATGGCGACACCTTTCTCGATTCGGAGACGTCATC
TATATCGCTTGGTACGCAGGAGGAGATACCAGAAGCAAAAAAAGACGCCC
AACCGGACACCGATGTCAGCCAGAGTCGGGGCACATCAAGCGACAGCGAC
GAAGAAAGTGATAGCGACCTATTTATCCGTCGACTCTCGACTACGCTTAT
ATTATCGGCCATCCGCTCATTGAAACACCTACCACGTCCTAAGTCTCATT
CACGCCAAGAAACCTTCGGAAGCTGTGGCATCAGCTCAAGCTTCGGAGTG
GCAAGTATCTATGGAAAGGGAGCTTGCGTGTCGAAACACGAAGTCTACGA
GTTGGTTCCTGCACCAAAAGGGCGCAAGATTAGCGGCTCAAGTTGGGTGT
TTAAGGTGAAGCCTGACGGTCTTTATAAGTCTCGGTTCTGTGCACAAGGT
TTCTCTCAGGTAGCTGGAACATTTTTTGGAAGCACAAACGCCCCAGTCTG
TCGCATACCGAGTGCCCGCATTGTGTTGGAGAATGCTGCCAGTCGCGATT
GGAATGTCATCCAGCTCGATGTACAGACAACATTTCTTCAGAGTGAGATG
AAAGAAGAGGTATATGTGAGATAACTATTTATCCGTCGACTCTCGACTAC
GCTTATATTATCGGCCATCCGCTCATTGAAACACCTACCACGTCCTAAGT
CTCATTCACGCCAAGAAACCTTCGGAAGCTGTGGCATCAGCTCAAGCTTC
GGAGTGGCAAGTATCTATGGAAAGGGAGCTTGCGTGTCGAAACACGAAGT
CTACGAGTTGGTTCCTGCACCAAAAGGGCGCAAGATTAGCGGCTCAAGTT
GGGTGTTTAAGGTGAAGCCTGACGGTCTTTATAAGTCTCGGTTCTGTGCA
CAAGGTTTCTCTCAGGTAGCTGGAACATTTTTTGGAAGCACAAACGCCCC
AGTCTGTCGCATACCGAGTGCCCGCATTGTGTTGGAGAATGCTGCCAGTC
GCGATTGGAATGTCATCCAGCTCGATGTACAGACAACATTTCTTCAGAGT
GAGATGAAAGAAGAGGTATATGTGAGATAA
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