mRNA_M-pyrifera_M_contig114630.3046.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig114630.3046.1 vs. uniprot
Match: A0A2P6NN14_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NN14_9EUKA) HSP 1 Score: 118 bits (295), Expect = 2.490e-27 Identity = 58/94 (61.70%), Postives = 72/94 (76.60%), Query Frame = 1
Query: 289 LARKNKLDELLVTMQSSVNRDLIDAVAVDFCYVNSKNSRKKLVKALYAVGRHKLVLLPYYARLAATLNKCMPDIGPALVELLEGEFRFLKKKKD 570
L + LD +L + + VNRDLID A DFCYVNSK +RKKLVKAL++V R +LVLLPYYAR+ + LNKCM DIGP LV +LE EF++L K+KD
Sbjct: 504 LGANSSLDTILFKLPTCVNRDLIDEAAKDFCYVNSKINRKKLVKALFSVPRTQLVLLPYYARMVSVLNKCMKDIGPQLVSMLEEEFQWLFKEKD 597
BLAST of mRNA_M-pyrifera_M_contig114630.3046.1 vs. uniprot
Match: L8HJ34_ACACA (MIF4G domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HJ34_ACACA) HSP 1 Score: 116 bits (291), Expect = 8.640e-27 Identity = 54/88 (61.36%), Postives = 68/88 (77.27%), Query Frame = 1
Query: 307 LDELLVTMQSSVNRDLIDAVAVDFCYVNSKNSRKKLVKALYAVGRHKLVLLPYYARLAATLNKCMPDIGPALVELLEGEFRFLKKKKD 570
L+ELL + + VNRDLID A+DFCY+N+K +RKKL+K L+ R +L LLPYYARL ATLN+CM DIGPALV +LE EF + +KKD
Sbjct: 647 LEELLHRLPNCVNRDLIDKAAIDFCYINTKGNRKKLIKTLFNAPRTQLALLPYYARLVATLNQCMKDIGPALVAMLEEEFNYFMRKKD 734
BLAST of mRNA_M-pyrifera_M_contig114630.3046.1 vs. uniprot
Match: A0A388KY68_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KY68_CHABU) HSP 1 Score: 112 bits (280), Expect = 2.570e-25 Identity = 85/202 (42.08%), Postives = 114/202 (56.44%), Query Frame = 1
Query: 1 EDLLDLRAMLPAVLFGEA------------PDTCQQEGGEEVIPAEGDTAGGELEGADTEDVSPPPNDEGVEDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGLARKNKLDELLVTMQSSVNRDLIDAVAVDFCYVNSKNSRKKLVKALYAVGRHKLVLLPYYARLAATLNKCMPDIGPALVELLEGEFRFLKKKKD 570
E L DLRA +PAVL G+ P + Q+ + V A+G++ G EG + E + D+G + A XXXXXXXXX G A LD LL + V+RD+ID +AVDFCY+NSK++RKKLV+AL++V R L LLPYY+RL ATL++CM D+ P L+++LE EF L KKD
Sbjct: 474 ESLPDLRAFVPAVLLGDVEQKSTAEEAQTHPQSSLQQKPDPVPNADGNSLDGSKEGLEDEAQAAERKDDG-KPAVPSTPDTTDSTVTEGERAKERXXXXXXXXXRLKG-AESASLDGLLQRLPGCVSRDMIDQLAVDFCYINSKSNRKKLVRALFSVPRTALELLPYYSRLVATLSQCMRDVAPFLLQMLEDEFNMLLNKKD 673
BLAST of mRNA_M-pyrifera_M_contig114630.3046.1 vs. uniprot
Match: D8SDL0_SELML (Uncharacterized protein n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SDL0_SELML) HSP 1 Score: 108 bits (270), Expect = 5.520e-24 Identity = 98/196 (50.00%), Postives = 120/196 (61.22%), Query Frame = 1
Query: 1 EDLLDLRAMLPAVLFGEAPDTCQQEGGEEVIPAEGDTAGGELEGADTEDVSPPPND------EGVEDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGLARKNKLDELLVTMQSSVNRDLIDAVAVDFCYVNSKNSRKKLVKALYAVGRHKLVLLPYYARLAATLNKCMPDIGPALVELLEGEFRFLKKKKD 570
E L DLRA +PAVL GE+ + + GE P + A EL T +V P N+ E V + XXXXXXXXXXXXXXXXXXXXXX LD LL + +V+RDLID + VDFCYVNSK++RKKLV+ L+ V R L LLP+Y+R+ ATL+ CM DI P L++LLE EF FL KKD
Sbjct: 335 ESLPDLRAFVPAVLLGES----ESKSGESKTPEQEVRADSEL---GTAEVHVPSNEAENASGEVVPEEKNPNSEKARXXXXXXXXXXXXXXXXXXXXXXWKSFGDGGNLDSLLQRLPGAVSRDLIDQLTVDFCYVNSKSNRKKLVRTLFNVPRTSLELLPHYSRMVATLSTCMKDITPMLLQLLEDEFNFLINKKD 523
BLAST of mRNA_M-pyrifera_M_contig114630.3046.1 vs. uniprot
Match: A0A175YN50_DAUCS (Uncharacterized protein n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A175YN50_DAUCS) HSP 1 Score: 107 bits (267), Expect = 1.400e-23 Identity = 52/88 (59.09%), Postives = 66/88 (75.00%), Query Frame = 1
Query: 307 LDELLVTMQSSVNRDLIDAVAVDFCYVNSKNSRKKLVKALYAVGRHKLVLLPYYARLAATLNKCMPDIGPALVELLEGEFRFLKKKKD 570
LD LL + V+RDLID + V+FCYVNSK+SRKKLV+AL++V R L LLPYY+R+ ATL+ CM D+ L++LLE EF FL KKD
Sbjct: 473 LDGLLQRLPGCVSRDLIDQLTVEFCYVNSKSSRKKLVRALFSVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQLLEEEFNFLLNKKD 560
BLAST of mRNA_M-pyrifera_M_contig114630.3046.1 vs. uniprot
Match: A0A834SHZ9_9FABA (Regulator of nonsense transcripts UPF2 n=1 Tax=Senna tora TaxID=362788 RepID=A0A834SHZ9_9FABA) HSP 1 Score: 107 bits (267), Expect = 1.400e-23 Identity = 105/195 (53.85%), Postives = 129/195 (66.15%), Query Frame = 1
Query: 1 EDLLDLRAMLPAVLFGEA-PDTCQQEGGEEVIPAEGDTAGGELEGADTEDVSPP----PNDEGVEDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGLARKNKLDELLVTMQSSVNRDLIDAVAVDFCYVNSKNSRKKLVKALYAVGRHKLVLLPYYARLAATLNKCMPDIGPALVELLEGEFRFLKKKKD 570
E L DLRA +PAVL GE P +Q G + P E ++ G++ ++ DVS P E E XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LD LL + V+RDLID + V+FCY+NSK++RKKLV+AL+ V R L LLPYY+RL ATL+ CM D+ L+++LE EF FL KKD
Sbjct: 425 ECLPDLRAFVPAVLLGEVEPKINEQSGKGQDQPTELESDKGQMNTQESGDVSTESSALPEAESTERQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLRNLEGTSLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKKLVRALFNVPRTSLELLPYYSRLVATLSTCMKDVSSMLLQMLEEEFNFLINKKD 619
BLAST of mRNA_M-pyrifera_M_contig114630.3046.1 vs. uniprot
Match: A0A397V1T3_9GLOM (Armadillo-type protein (Fragment) n=3 Tax=Gigaspora TaxID=4873 RepID=A0A397V1T3_9GLOM) HSP 1 Score: 107 bits (266), Expect = 1.890e-23 Identity = 53/88 (60.23%), Postives = 66/88 (75.00%), Query Frame = 1
Query: 304 KLDELLVTMQSSVNRDLIDAVAVDFCYVNSKNSRKKLVKALYAVGRHKLVLLPYYARLAATLNKCMPDIGPALVELLEGEFRFLKKKK 567
+LD LL + + VNRDLID AVDFCY+NSK SRKKL+K L V R +L LLPYY+RL ATLN PD+ A+++ LEGEF+ L+KKK
Sbjct: 468 QLDSLLSRLPNMVNRDLIDQAAVDFCYLNSKASRKKLIKTLVGVPRTRLDLLPYYSRLIATLNPHYPDVATAVLQALEGEFKSLQKKK 555
BLAST of mRNA_M-pyrifera_M_contig114630.3046.1 vs. uniprot
Match: A0A7J7CI92_TRIWF (Regulator of nonsense transcripts 2 isoform 1 n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7CI92_TRIWF) HSP 1 Score: 107 bits (266), Expect = 1.900e-23 Identity = 51/88 (57.95%), Postives = 66/88 (75.00%), Query Frame = 1
Query: 307 LDELLVTMQSSVNRDLIDAVAVDFCYVNSKNSRKKLVKALYAVGRHKLVLLPYYARLAATLNKCMPDIGPALVELLEGEFRFLKKKKD 570
LD LL +Q V+RDLID + VDFCY+NSK++RKKLV+AL+ V R L LLPYY+R+ ATL+ CM D+ L+++LE EF FL KKD
Sbjct: 467 LDALLQRLQGCVSRDLIDQLTVDFCYLNSKSNRKKLVRALFTVPRTSLELLPYYSRMVATLSTCMKDVSSMLLQMLEEEFNFLINKKD 554
BLAST of mRNA_M-pyrifera_M_contig114630.3046.1 vs. uniprot
Match: A0A2K1JVF7_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JVF7_PHYPA) HSP 1 Score: 107 bits (266), Expect = 1.920e-23 Identity = 50/88 (56.82%), Postives = 65/88 (73.86%), Query Frame = 1
Query: 307 LDELLVTMQSSVNRDLIDAVAVDFCYVNSKNSRKKLVKALYAVGRHKLVLLPYYARLAATLNKCMPDIGPALVELLEGEFRFLKKKKD 570
LD LL + V+RDLID + VDFCY+NSK+SRKKLV+ L+ V R L L+PYY+R+ ATL+ CM D+ P +++LLE EF FL KKD
Sbjct: 518 LDSLLQRLPGCVSRDLIDQLTVDFCYLNSKSSRKKLVRTLFNVPRSSLELIPYYSRMIATLSTCMKDVAPMILQLLEEEFNFLMNKKD 605
BLAST of mRNA_M-pyrifera_M_contig114630.3046.1 vs. uniprot
Match: A0A2R6W0M4_MARPO (Uncharacterized protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6W0M4_MARPO) HSP 1 Score: 106 bits (265), Expect = 2.600e-23 Identity = 50/88 (56.82%), Postives = 65/88 (73.86%), Query Frame = 1
Query: 307 LDELLVTMQSSVNRDLIDAVAVDFCYVNSKNSRKKLVKALYAVGRHKLVLLPYYARLAATLNKCMPDIGPALVELLEGEFRFLKKKKD 570
LD LL + V+RDLID + VDFCY+NSK++RKKLV+ALY V R L L+PYY+R+ ATL+ CM D+ P +++ LE EF FL KKD
Sbjct: 477 LDSLLQRLPGCVSRDLIDQLTVDFCYLNSKSNRKKLVRALYTVPRTSLELIPYYSRMIATLSTCMKDVAPMILQWLEEEFNFLMTKKD 564 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114630.3046.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig114630.3046.1 >prot_M-pyrifera_M_contig114630.3046.1 ID=prot_M-pyrifera_M_contig114630.3046.1|Name=mRNA_M-pyrifera_M_contig114630.3046.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=182bp MLPAVLFGEAPDTCQQEGGEEVIPAEGDTAGGELEGADTEDVSPPPNDEGback to top mRNA from alignment at M-pyrifera_M_contig114630:2..571+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig114630.3046.1 ID=mRNA_M-pyrifera_M_contig114630.3046.1|Name=mRNA_M-pyrifera_M_contig114630.3046.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=570bp|location=Sequence derived from alignment at M-pyrifera_M_contig114630:2..571+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig114630:2..571+ >mRNA_M-pyrifera_M_contig114630.3046.1 ID=mRNA_M-pyrifera_M_contig114630.3046.1|Name=mRNA_M-pyrifera_M_contig114630.3046.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1092bp|location=Sequence derived from alignment at M-pyrifera_M_contig114630:2..571+ (Macrocystis pyrifera P11B4 male)back to top |