mRNA_M-pyrifera_M_contig114597.3037.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig114597.3037.1 vs. uniprot
Match: A0A200PP66_9MAGN (Uncharacterized protein n=5 Tax=Mesangiospermae TaxID=1437183 RepID=A0A200PP66_9MAGN) HSP 1 Score: 239 bits (610), Expect = 9.570e-79 Identity = 114/118 (96.61%), Postives = 114/118 (96.61%), Query Frame = 1
Query: 40 MSAKMRTTCTWTERPYEASLFPGIGFGPFLRSLGGRRRRPPSGGARAIRPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRARRRLALECKGRRELDCKTHPSSRDESLAPRCRLFATWG 393
MS KMRTTCTWTERPYEA LFPGIGFGPFLRSLGG RRRPPSGGARAIRPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRA RRLALECKGRRELDCKTHPSSRDESLAPRCRLFATWG
Sbjct: 1 MSVKMRTTCTWTERPYEALLFPGIGFGPFLRSLGGGRRRPPSGGARAIRPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRAGRRLALECKGRRELDCKTHPSSRDESLAPRCRLFATWG 118
BLAST of mRNA_M-pyrifera_M_contig114597.3037.1 vs. uniprot
Match: A0A6J5U9F4_PRUAR (Uncharacterized protein n=3 Tax=rosids TaxID=71275 RepID=A0A6J5U9F4_PRUAR) HSP 1 Score: 214 bits (544), Expect = 6.190e-70 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1
Query: 52 MRTTCTWTERPYEASLFPGIGFGPFLRSLGGRRRRPPSGGARAIRPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRARRRLALECKGRRELDCKTHPSSRDES 357
MRTTCTWTERPYEASLFPGIGFGPFLRSLGGRRRRPPSGGARAIRPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRARRRLALECKGRRELDCKTHPSSRDES
Sbjct: 1 MRTTCTWTERPYEASLFPGIGFGPFLRSLGGRRRRPPSGGARAIRPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRARRRLALECKGRRELDCKTHPSSRDES 102
BLAST of mRNA_M-pyrifera_M_contig114597.3037.1 vs. uniprot
Match: G7JVL6_MEDTR (Uncharacterized protein n=2 Tax=Magnoliopsida TaxID=3398 RepID=G7JVL6_MEDTR) HSP 1 Score: 191 bits (485), Expect = 1.950e-57 Identity = 93/109 (85.32%), Postives = 95/109 (87.16%), Query Frame = -3
Query: 65 PRWRRADIEVPNFRPCSTGGSCSQAPFCLCTRGPISVWPEETFARLRYLLGGLRPIETVYLRLSLGP*V*WLGPPRKGAFFAFHLSCAGKAQSQSQGTVKLHRVFLSRC 391
P R I +FRPCSTGGSCSQAPFCLCTRGPISVWPEETFARLRYLLGGLRPIETVYLRLSLG + W PPRK AFFAFHLSCAGKAQSQSQGTVKLHRVFLSRC
Sbjct: 121 PSTRHRRITKADFRPCSTGGSCSQAPFCLCTRGPISVWPEETFARLRYLLGGLRPIETVYLRLSLG--LYWHKPPRKEAFFAFHLSCAGKAQSQSQGTVKLHRVFLSRC 227
BLAST of mRNA_M-pyrifera_M_contig114597.3037.1 vs. uniprot
Match: A0A444YMV8_ARAHY (Uncharacterized protein n=1 Tax=Arachis hypogaea TaxID=3818 RepID=A0A444YMV8_ARAHY) HSP 1 Score: 186 bits (472), Expect = 2.740e-57 Identity = 95/111 (85.59%), Postives = 96/111 (86.49%), Query Frame = 1
Query: 79 RPYEASLFPGIGFGPFLRSLGGRRRRPPSGGARAIRPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRARRRLALECKGRRELDCKTHP------SSRDESLAPRCRLFATWG 393
+ YEASLFPGIGFG FLRSLGG RRRPP GGARAIRPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRAR RLALE KGRRELDCKTHP S R E LAPRCRLFATWG
Sbjct: 42 KTYEASLFPGIGFGLFLRSLGGGRRRPPFGGARAIRPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRARWRLALEYKGRRELDCKTHPLIFPKSSHRWEGLAPRCRLFATWG 152
BLAST of mRNA_M-pyrifera_M_contig114597.3037.1 vs. uniprot
Match: T2DPD7_PHAVU (Cell wall-associated hydrolase n=1 Tax=Phaseolus vulgaris TaxID=3885 RepID=T2DPD7_PHAVU) HSP 1 Score: 182 bits (461), Expect = 2.500e-53 Identity = 100/145 (68.97%), Postives = 104/145 (71.72%), Query Frame = -3
Query: 2 PRWRRADIEVPNFRPCSTGGSCSQAPFCLCTRGPISVWPEETFARLRYLLGGLRPIETVYLRLSLGP*V*WLG---------------PPRKGAFFAFHLSCAGKAQSQSQGTVKLHRVFLSRCR*SASSQTWLWPLASL*DSAQ 391
P R I +FRPCSTGGSCSQAPFCLCTRGPISVWPEETFARLRYL GGLRPIETVYLRLS GP W PP+K AFFA H+ CAGKAQSQSQ TVKL RVFLSRCR SASSQT L+ SL DSAQ
Sbjct: 138 PSTRHRRITKADFRPCSTGGSCSQAPFCLCTRGPISVWPEETFARLRYLWGGLRPIETVYLRLSPGPY--WHKVRIPTLPEWYLTDGLPPQKKAFFALHIRCAGKAQSQSQETVKLQRVFLSRCR-SASSQTCLFHRVSLRDSAQ 279
BLAST of mRNA_M-pyrifera_M_contig114597.3037.1 vs. uniprot
Match: A0A5A7TL99_CUCME (Uncharacterized protein n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5A7TL99_CUCME) HSP 1 Score: 169 bits (429), Expect = 3.270e-52 Identity = 87/117 (74.36%), Postives = 90/117 (76.92%), Query Frame = 1
Query: 7 HCLRERPGAIAMSAKMRTTCTWTERPYEASLFPGIGFGPFLRSLGGRRRRPPSGGARAIRPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRARRRLALECKGRRELDCKTHPSSRDES 357
HCL ER I MS KMRTTC WT+RPYEASLFPGIGF PFLRSLG PT QGTVSGRQFLWGVGLPK NGG+QRFP+AR RLALE KGRRELDCKTHPSSRDES
Sbjct: 15 HCLGERLDEIDMSVKMRTTCNWTKRPYEASLFPGIGFEPFLRSLG---------------PTSQGTVSGRQFLWGVGLPKDNGGMQRFPQARLRLALEWKGRRELDCKTHPSSRDES 116
BLAST of mRNA_M-pyrifera_M_contig114597.3037.1 vs. uniprot
Match: A0A7G2FKR6_ARATH (Uncharacterized protein ycf68 n=5 Tax=Magnoliopsida TaxID=3398 RepID=A0A7G2FKR6_ARATH) HSP 1 Score: 174 bits (440), Expect = 2.680e-49 Identity = 88/106 (83.02%), Postives = 88/106 (83.02%), Query Frame = 1
Query: 40 MSAKMRTTCTWTERPYEASLFPGIGFGPFLRSLGGRRRRPPSGGARAIRPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRARRRLALECKGRRELDCKTHPSSRDES 357
MS KMRTTCTWTERPYEASLFPGIGFG FLRSLG PTGQGTVSGRQFLWGVGLPKGNGGVQRFPRA RRLALECKGRRELDCKTHPSSRDES
Sbjct: 441 MSVKMRTTCTWTERPYEASLFPGIGFGLFLRSLG---------------PTGQGTVSGRQFLWGVGLPKGNGGVQRFPRAGRRLALECKGRRELDCKTHPSSRDES 531
BLAST of mRNA_M-pyrifera_M_contig114597.3037.1 vs. uniprot
Match: A0A166GEI3_DAUCS (Uncharacterized protein n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A166GEI3_DAUCS) HSP 1 Score: 169 bits (427), Expect = 3.840e-49 Identity = 86/118 (72.88%), Postives = 90/118 (76.27%), Query Frame = -3
Query: 38 PRWRRADIEVPNFRPCSTGGSCSQAPFCLCTRGPISVWPEETFARLRYLLGGLRPIETVYLRLSLGP*V*WLGPPRKGAFFAFHLSCAGKAQSQSQGTVKLHRVFLSRCR*SASSQTW 391
P R I +FRPCSTGGSCSQAPFCLCTRG SV PEE FARLRYLLGGLRPIETV LRLSLGP PPRK AFFAFHLSC GKAQSQS GT+KLHRVFLSR S + + W
Sbjct: 98 PSTRHRRITKADFRPCSTGGSCSQAPFCLCTRGQFSVRPEEIFARLRYLLGGLRPIETVDLRLSLGP------PPRKEAFFAFHLSCTGKAQSQSHGTMKLHRVFLSRSPTSLTFRHW 209
BLAST of mRNA_M-pyrifera_M_contig114597.3037.1 vs. uniprot
Match: A0A7G2FMH4_ARATH (Uncharacterized protein ycf68 n=8 Tax=Magnoliopsida TaxID=3398 RepID=A0A7G2FMH4_ARATH) HSP 1 Score: 174 bits (440), Expect = 6.640e-49 Identity = 88/106 (83.02%), Postives = 88/106 (83.02%), Query Frame = 1
Query: 40 MSAKMRTTCTWTERPYEASLFPGIGFGPFLRSLGGRRRRPPSGGARAIRPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRARRRLALECKGRRELDCKTHPSSRDES 357
MS KMRTTCTWTERPYEASLFPGIGFG FLRSLG PTGQGTVSGRQFLWGVGLPKGNGGVQRFPRA RRLALECKGRRELDCKTHPSSRDES
Sbjct: 501 MSVKMRTTCTWTERPYEASLFPGIGFGLFLRSLG---------------PTGQGTVSGRQFLWGVGLPKGNGGVQRFPRAGRRLALECKGRRELDCKTHPSSRDES 591
BLAST of mRNA_M-pyrifera_M_contig114597.3037.1 vs. uniprot
Match: A0A6D2J9E2_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2J9E2_9BRAS) HSP 1 Score: 149 bits (376), Expect = 4.100e-43 Identity = 77/94 (81.91%), Postives = 77/94 (81.91%), Query Frame = 1
Query: 76 ERPYEASLFPGIGFGPFLRSLGGRRRRPPSGGARAIRPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRARRRLALECKGRRELDCKTHPSSRDES 357
ERPYEASLFPGIGFG FLRSLG PTGQGTVSGRQFLWGVGLPKGNGGVQRFPRA RRLALECKGRRELDCKTHPSSRDES
Sbjct: 116 ERPYEASLFPGIGFGLFLRSLG---------------PTGQGTVSGRQFLWGVGLPKGNGGVQRFPRAGRRLALECKGRRELDCKTHPSSRDES 194 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114597.3037.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig114597.3037.1 >prot_M-pyrifera_M_contig114597.3037.1 ID=prot_M-pyrifera_M_contig114597.3037.1|Name=mRNA_M-pyrifera_M_contig114597.3037.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=131bp SGHCLRERPGAIAMSAKMRTTCTWTERPYEASLFPGIGFGPFLRSLGGRRback to top mRNA from alignment at M-pyrifera_M_contig114597:22..570+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig114597.3037.1 ID=mRNA_M-pyrifera_M_contig114597.3037.1|Name=mRNA_M-pyrifera_M_contig114597.3037.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=549bp|location=Sequence derived from alignment at M-pyrifera_M_contig114597:22..570+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig114597:22..570+ >mRNA_M-pyrifera_M_contig114597.3037.1 ID=mRNA_M-pyrifera_M_contig114597.3037.1|Name=mRNA_M-pyrifera_M_contig114597.3037.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=786bp|location=Sequence derived from alignment at M-pyrifera_M_contig114597:22..570+ (Macrocystis pyrifera P11B4 male)back to top |