mRNA_M-pyrifera_M_contig114529.3033.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig114529.3033.1 vs. uniprot
Match: A0A5A8DKV0_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DKV0_CAFRO) HSP 1 Score: 76.3 bits (186), Expect = 3.820e-14 Identity = 47/102 (46.08%), Postives = 62/102 (60.78%), Query Frame = 1
Query: 13 SHTLRSRPFNVVTNRYVDGHEEKVEVDKKVERERAATRYWEVKEFDPITQVYLDRERDXXXXXXXXXXXEERRVRRAGAQPEGLRKRDSAGYDTVGHRVVDE 318
+H R F+VVT RY+ HE K D+ + R RAA R+W+ ++FDP+ Q + D E+D XXXXXXX A P R R++AGYD VGHRV+DE
Sbjct: 164 AHASMDRDFDVVTGRYLADHEAKAARDEDIARRRAADRWWQTRDFDPVRQRFYDAEKDAKAAXXXXXXXXXXXXXXXXALPPAERLRETAGYDVVGHRVIDE 265
BLAST of mRNA_M-pyrifera_M_contig114529.3033.1 vs. uniprot
Match: A0A0M0JL94_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JL94_9EUKA) HSP 1 Score: 56.6 bits (135), Expect = 4.130e-7 Identity = 25/96 (26.04%), Postives = 57/96 (59.38%), Query Frame = 1
Query: 31 RPFNVVTNRYVDGHEEKVEVDKKVERERAATRYWEVKEFDPITQVYLDRERDXXXXXXXXXXXEERRVRRAGAQPEGLRKRDSAGYDTVGHRVVDE 318
R F++++NRYV+GHE KV ++++++R A ++WE +++P+ ++D +++ E++ +++ P L++ + YD H+V +E
Sbjct: 191 RDFDILSNRYVEGHEAKVRLEREIQRGIACQKFWETHDYEPLAGHFVDPDKEAAYQDMIAMELEKQPLKQFNRLPPNLQRGEGFVYDITTHQVKNE 286
BLAST of mRNA_M-pyrifera_M_contig114529.3033.1 vs. uniprot
Match: A0A7S1CID5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CID5_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 1.440e-6 Identity = 21/52 (40.38%), Postives = 40/52 (76.92%), Query Frame = 1
Query: 31 RPFNVVTNRYVDGHEEKVEVDKKVERERAATRYWEVKEFDPITQVYLDRERD 186
R F++++NRY++ HEEK VD++++R+ AA R+W+ + F+P+T Y D +++
Sbjct: 171 RDFDLISNRYMEAHEEKDAVDREMQRQAAAERFWQTRSFNPVTCAYYDEKKE 222
BLAST of mRNA_M-pyrifera_M_contig114529.3033.1 vs. uniprot
Match: A0A7S3NS64_EUPCR (Hypothetical protein (Fragment) n=1 Tax=Euplotes crassus TaxID=5936 RepID=A0A7S3NS64_EUPCR) HSP 1 Score: 54.7 bits (130), Expect = 2.050e-6 Identity = 22/52 (42.31%), Postives = 39/52 (75.00%), Query Frame = 1
Query: 31 RPFNVVTNRYVDGHEEKVEVDKKVERERAATRYWEVKEFDPITQVYLDRERD 186
R +N++TNRY++ ++EKV VDK++ER AA +YW+ ++DP+ Y D +++
Sbjct: 167 RDYNIITNRYLELNDEKVVVDKEIERLNAAKKYWKTHDYDPVNTQYYDPDKE 218
BLAST of mRNA_M-pyrifera_M_contig114529.3033.1 vs. uniprot
Match: A0A1R2ARJ9_9CILI (Uncharacterized protein n=2 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2ARJ9_9CILI) HSP 1 Score: 52.4 bits (124), Expect = 1.290e-5 Identity = 28/105 (26.67%), Postives = 53/105 (50.48%), Query Frame = 1
Query: 1 KNFFSHTLRSRPFNVVTNRYVDGHEEKVEVDKKVERERAATRYWEVKEFDPITQVYLDRERDXXXXXXXXXXXEERRVRRAGAQPEGLRKRDSAGYDTVGHRVVD 315
K + + + R FN+++N+Y+ GHEEK + D + + +AA YW+ ++D T Y+D E++ ++ P G++ + A Y + +VVD
Sbjct: 155 KTYKINIVEHRDFNIISNKYIQGHEEKAKKDLESYKLQAAEEYWKAHDYDIFTCKYIDPEKEELEKKNAVNDALTLCKKKYEELPNGVKYSEGALYQAISSKVVD 259
BLAST of mRNA_M-pyrifera_M_contig114529.3033.1 vs. uniprot
Match: A0A7S2C7Q8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2C7Q8_9EUKA) HSP 1 Score: 52.0 bits (123), Expect = 1.540e-5 Identity = 20/52 (38.46%), Postives = 38/52 (73.08%), Query Frame = 1
Query: 31 RPFNVVTNRYVDGHEEKVEVDKKVERERAATRYWEVKEFDPITQVYLDRERD 186
R FN+++NRYV+ H+ KV ++++++R AA +YWE +++P+ YL E++
Sbjct: 225 RDFNILSNRYVEQHDAKVNLEREIQRRTAAQKYWETHDYEPVLGHYLQPEKE 276
BLAST of mRNA_M-pyrifera_M_contig114529.3033.1 vs. uniprot
Match: A0A7S0L0E9_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L0E9_9EUKA) HSP 1 Score: 50.8 bits (120), Expect = 4.560e-5 Identity = 24/94 (25.53%), Postives = 50/94 (53.19%), Query Frame = 1
Query: 31 RPFNVVTNRYVDGHEEKVEVDKKVERERAATRYWEVKEFDPITQVYLDRERDXXXXXXXXXXXEERRVRRAGAQPEGLRKRDSAGYDTVGHRVV 312
R +N+++N+YVD H K +++ ++++ AA +YWE +FDP+T Y+ +++ ++ ++ P L+K + YD +V
Sbjct: 181 RDYNILSNKYVDDHHAKKQLEHEIDKRSAAHKYWETHDFDPMTSKYVHPDKEAAALAAEAEDQLQQPMKAFNKLPPALQKGEGFVYDITSPALV 274 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114529.3033.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig114529.3033.1 >prot_M-pyrifera_M_contig114529.3033.1 ID=prot_M-pyrifera_M_contig114529.3033.1|Name=mRNA_M-pyrifera_M_contig114529.3033.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=106bp KNFFSHTLRSRPFNVVTNRYVDGHEEKVEVDKKVERERAATRYWEVKEFDback to top mRNA from alignment at M-pyrifera_M_contig114529:151..468- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig114529.3033.1 ID=mRNA_M-pyrifera_M_contig114529.3033.1|Name=mRNA_M-pyrifera_M_contig114529.3033.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=318bp|location=Sequence derived from alignment at M-pyrifera_M_contig114529:151..468- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig114529:151..468- >mRNA_M-pyrifera_M_contig114529.3033.1 ID=mRNA_M-pyrifera_M_contig114529.3033.1|Name=mRNA_M-pyrifera_M_contig114529.3033.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=636bp|location=Sequence derived from alignment at M-pyrifera_M_contig114529:151..468- (Macrocystis pyrifera P11B4 male)back to top |